RNA–Protein interactions for RNA: ENST00000504152.5

DDR1-252, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 695 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-252ENST00000504152 EXOC3L1Q86VI1 746 aa17.41■□□□□ 0.38
DDR1-252ENST00000504152 PLD3Q8IV08 490 aa17.41■□□□□ 0.38
DDR1-252ENST00000504152 KRT78Q8N1N4 520 aa17.41■□□□□ 0.38
DDR1-252ENST00000504152 RDH11Q8TC12 318 aa17.41■□□□□ 0.38
DDR1-252ENST00000504152 PMEPA1Q969W9 287 aa17.41■□□□□ 0.38
DDR1-252ENST00000504152 OR2A5Q96R48 311 aa17.41■□□□□ 0.38
DDR1-252ENST00000504152 TMEM121BQ9BXQ6 578 aaPredicted RBP17.41■□□□□ 0.38
DDR1-252ENST00000504152 ULBP3Q9BZM4 244 aa17.41■□□□□ 0.38
DDR1-252ENST00000504152 EHD1Q9H4M9 534 aa17.41■□□□□ 0.38
DDR1-252ENST00000504152 FOXJ2Q9P0K8 574 aa17.41■□□□□ 0.38
DDR1-252ENST00000504152 ACSL6Q9UKU0 697 aa17.41■□□□□ 0.38
DDR1-252ENST00000504152 ASB1Q9Y576 335 aa17.41■□□□□ 0.38
DDR1-252ENST00000504152 PCDHB3Q9Y5E6 796 aa17.41■□□□□ 0.38
DDR1-252ENST00000504152 ACTL7BQ9Y614 415 aa17.41■□□□□ 0.38
DDR1-252ENST00000504152 UQCRHLA0A096LP55 91 aa17.4■□□□□ 0.38
DDR1-252ENST00000504152 LOC105369274A0A096LPK9 316 aa17.4■□□□□ 0.38
DDR1-252ENST00000504152 LOC102723532A0A0G2JNH3 316 aa17.4■□□□□ 0.38
DDR1-252ENST00000504152 TRBC2A0A5B9 178 aa17.4■□□□□ 0.38
DDR1-252ENST00000504152 FEZF1A0PJY2 475 aa17.4■□□□□ 0.38
DDR1-252ENST00000504152 LRRC14BA6NHZ5 514 aa17.4■□□□□ 0.38
DDR1-252ENST00000504152 C1QTNF9BB2RNN3 333 aa17.4■□□□□ 0.38
DDR1-252ENST00000504152 STMND1H3BQB6 276 aa17.4■□□□□ 0.38
DDR1-252ENST00000504152 E2F3O00716 465 aa17.4■□□□□ 0.38
DDR1-252ENST00000504152 ZNF749O43361 778 aa17.4■□□□□ 0.38
DDR1-252ENST00000504152 OR1F1O43749 312 aa17.4■□□□□ 0.38
DDR1-252ENST00000504152 LCMT2O60294 686 aaKnown RBP17.4■□□□□ 0.38
DDR1-252ENST00000504152 NRP2O60462 931 aa17.4■□□□□ 0.38
DDR1-252ENST00000504152 STK17BO94768 372 aa17.4■□□□□ 0.38
DDR1-252ENST00000504152 KIAA0754O94854 1291 aa17.4■□□□□ 0.38
DDR1-252ENST00000504152 NTRK1P04629 796 aa17.4■□□□□ 0.38
DDR1-252ENST00000504152 UQCRHP07919 91 aa17.4■□□□□ 0.38
DDR1-252ENST00000504152 C1QTNF9P0C862 333 aa17.4■□□□□ 0.38
DDR1-252ENST00000504152 CPA3P15088 417 aa17.4■□□□□ 0.38
DDR1-252ENST00000504152 NFKB2Q00653 900 aa17.4■□□□□ 0.38
DDR1-252ENST00000504152 MEF2AQ02078 507 aaPredicted RBP17.4■□□□□ 0.38
DDR1-252ENST00000504152 IRF8Q02556 426 aa17.4■□□□□ 0.38
DDR1-252ENST00000504152 CHIT1Q13231 466 aa17.4■□□□□ 0.38
DDR1-252ENST00000504152 GRM7Q14831 915 aa17.4■□□□□ 0.38
DDR1-252ENST00000504152 HIST2H2ACQ16777 129 aaPredicted RBP17.4■□□□□ 0.38
DDR1-252ENST00000504152 FAM214AQ32MH5 1076 aa17.4■□□□□ 0.38
DDR1-252ENST00000504152 HIST2H2AA3Q6FI13 130 aa17.4■□□□□ 0.38
DDR1-252ENST00000504152 OR4N4Q8N0Y3 316 aa17.4■□□□□ 0.38
DDR1-252ENST00000504152 TTC29Q8NA56 475 aaPredicted RBP17.4■□□□□ 0.38
DDR1-252ENST00000504152 TCP10LQ8TDR4 215 aa17.4■□□□□ 0.38
DDR1-252ENST00000504152 PPP4R1Q8TF05 950 aa17.4■□□□□ 0.38
DDR1-252ENST00000504152 ATP6V1E2Q96A05 226 aa17.4■□□□□ 0.38
DDR1-252ENST00000504152 CLIP3Q96DZ5 547 aa17.4■□□□□ 0.38
DDR1-252ENST00000504152 PTCD3Q96EY7 689 aaKnown RBP17.4■□□□□ 0.38
DDR1-252ENST00000504152 PKNOX2Q96KN3 472 aa17.4■□□□□ 0.38
DDR1-252ENST00000504152 ZNF285Q96NJ3 590 aa17.4■□□□□ 0.38
DDR1-252ENST00000504152 NDC1Q9BTX1 674 aa17.4■□□□□ 0.38
DDR1-252ENST00000504152 SARGQ9BW04 601 aa17.4■□□□□ 0.38
DDR1-252ENST00000504152 NLNQ9BYT8 704 aa17.4■□□□□ 0.38
DDR1-252ENST00000504152 PITHD1Q9GZP4 211 aaPredicted RBP17.4■□□□□ 0.38
DDR1-252ENST00000504152 IPPKQ9H8X2 491 aa17.4■□□□□ 0.38
DDR1-252ENST00000504152 VIPAS39Q9H9C1 493 aa17.4■□□□□ 0.38
DDR1-252ENST00000504152 TMBIM4Q9HC24 238 aa17.4■□□□□ 0.38
DDR1-252ENST00000504152 SSU72Q9NP77 194 aaKnown RBP17.4■□□□□ 0.38
DDR1-252ENST00000504152 TMEM184BQ9Y519 407 aaPredicted RBP17.4■□□□□ 0.38
DDR1-252ENST00000504152 TMEM8BA6NDV4 472 aa17.39■□□□□ 0.37
DDR1-252ENST00000504152 G3V2L1 256 aa17.39■□□□□ 0.37
DDR1-252ENST00000504152 ZSCAN9O15535 394 aaPredicted RBP17.39■□□□□ 0.37
DDR1-252ENST00000504152 CCNYL3P0C7X3 344 aa17.39■□□□□ 0.37
DDR1-252ENST00000504152 CREB1P16220 341 aa17.39■□□□□ 0.37
DDR1-252ENST00000504152 VARSP26640 1264 aaKnown RBP17.39■□□□□ 0.37
DDR1-252ENST00000504152 CASP2P42575 452 aa17.39■□□□□ 0.37
DDR1-252ENST00000504152 PRKAA2P54646 552 aa17.39■□□□□ 0.37
DDR1-252ENST00000504152 ARSFP54793 590 aa17.39■□□□□ 0.37
DDR1-252ENST00000504152 PCBP4P57723 403 aaKnown RBP17.39■□□□□ 0.37
DDR1-252ENST00000504152 HERVK_113P63132 956 aa17.39■□□□□ 0.37
DDR1-252ENST00000504152 PCDH1Q08174 1060 aa17.39■□□□□ 0.37
DDR1-252ENST00000504152 DOC2AQ14183 400 aa17.39■□□□□ 0.37
DDR1-252ENST00000504152 RBBP5Q15291 538 aaKnown RBP17.39■□□□□ 0.37
DDR1-252ENST00000504152 TBCCQ15814 346 aa17.39■□□□□ 0.37
DDR1-252ENST00000504152 PAGE2BQ5JRK9 111 aa17.39■□□□□ 0.37
DDR1-252ENST00000504152 YOD1Q5VVQ6 348 aaPredicted RBP17.39■□□□□ 0.37
DDR1-252ENST00000504152 ZYG11AQ6WRX3 759 aa17.39■□□□□ 0.37
DDR1-252ENST00000504152 GOLGA7Q7Z5G4 137 aa17.39■□□□□ 0.37
DDR1-252ENST00000504152 ZFAND4Q86XD8 727 aa17.39■□□□□ 0.37
DDR1-252ENST00000504152 ZNF655Q8N720 491 aaPredicted RBP17.39■□□□□ 0.37
DDR1-252ENST00000504152 MFSD9Q8NBP5 474 aa17.39■□□□□ 0.37
DDR1-252ENST00000504152 WDR34Q96EX3 536 aa17.39■□□□□ 0.37
DDR1-252ENST00000504152 EFCAB11Q9BUY7 163 aa17.39■□□□□ 0.37
DDR1-252ENST00000504152 C1QTNF3Q9BXJ4 246 aa17.39■□□□□ 0.37
DDR1-252ENST00000504152 ERVK-6Q9BXR3 956 aa17.39■□□□□ 0.37
DDR1-252ENST00000504152 SPRY4Q9C004 299 aa17.39■□□□□ 0.37
DDR1-252ENST00000504152 C12orf65Q9H3J6 166 aaKnown RBP17.39■□□□□ 0.37
DDR1-252ENST00000504152 NT5DC2Q9H857 520 aa17.39■□□□□ 0.37
DDR1-252ENST00000504152 ACTR5Q9H9F9 607 aaPredicted RBP17.39■□□□□ 0.37
DDR1-252ENST00000504152 ENAMQ9NRM1 1142 aa17.39■□□□□ 0.37
DDR1-252ENST00000504152 STARD5Q9NSY2 213 aa17.39■□□□□ 0.37
DDR1-252ENST00000504152 PCDHGA4Q9Y5G9 962 aa17.39■□□□□ 0.37
DDR1-252ENST00000504152 MDC1Q14676 2089 aaKnown RBP17.39■□□□□ 0.37
DDR1-252ENST00000504152 WDFY3Q8IZQ1 3526 aa17.39■□□□□ 0.37
DDR1-252ENST00000504152 SPTBP11277 2137 aa17.38■□□□□ 0.37
DDR1-252ENST00000504152 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.38■□□□□ 0.37
DDR1-252ENST00000504152 H3BMH7 237 aa17.38■□□□□ 0.37
DDR1-252ENST00000504152 TYROBPO43914 113 aa17.38■□□□□ 0.37
DDR1-252ENST00000504152 CPNE3O75131 537 aaKnown RBP17.38■□□□□ 0.37
DDR1-252ENST00000504152 WFS1O76024 890 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms