RNA–Protein interactions for RNA: ENST00000504078.1

USP46-205, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 4

Gene USP46, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-205ENST00000504078 SHMT2P34897 504 aa3.43□□□□□ -1.86
USP46-205ENST00000504078 PCK1P35558 622 aa3.43□□□□□ -1.86
USP46-205ENST00000504078 ZNF135P52742 658 aaPredicted RBP3.43□□□□□ -1.86
USP46-205ENST00000504078 EMP2P54851 167 aa3.43□□□□□ -1.86
USP46-205ENST00000504078 DLX5P56178 289 aa3.43□□□□□ -1.86
USP46-205ENST00000504078 WNT3P56703 355 aa3.43□□□□□ -1.86
USP46-205ENST00000504078 NUP107P57740 925 aa3.43□□□□□ -1.86
USP46-205ENST00000504078 YBX1P67809 324 aaKnown RBP3.43□□□□□ -1.86
USP46-205ENST00000504078 IFI35P80217 286 aaPredicted RBP3.43□□□□□ -1.86
USP46-205ENST00000504078 CACNG1Q06432 222 aa3.43□□□□□ -1.86
USP46-205ENST00000504078 PPIDQ08752 370 aaKnown RBP3.43□□□□□ -1.86
USP46-205ENST00000504078 TSTA3Q13630 321 aaPredicted RBP3.43□□□□□ -1.86
USP46-205ENST00000504078 TUBA3CQ13748 450 aa3.43□□□□□ -1.86
USP46-205ENST00000504078 ITGA9Q13797 1035 aa3.43□□□□□ -1.86
USP46-205ENST00000504078 LONRF1Q17RB8 773 aa3.43□□□□□ -1.86
USP46-205ENST00000504078 HKDC1Q2TB90 917 aa3.43□□□□□ -1.86
USP46-205ENST00000504078 BTBD16Q32M84 506 aa3.43□□□□□ -1.86
USP46-205ENST00000504078 CCDC183Q5T5S1 534 aa3.43□□□□□ -1.86
USP46-205ENST00000504078 CDKAL1Q5VV42 579 aa3.43□□□□□ -1.86
USP46-205ENST00000504078 FBXW10Q5XX13 1052 aa3.43□□□□□ -1.86
USP46-205ENST00000504078 SPINK14Q6IE38 97 aa3.43□□□□□ -1.86
USP46-205ENST00000504078 TLDC1Q6P9B6 456 aa3.43□□□□□ -1.86
USP46-205ENST00000504078 TUBA3EQ6PEY2 450 aa3.43□□□□□ -1.86
USP46-205ENST00000504078 PAMR1Q6UXH9 720 aa3.43□□□□□ -1.86
USP46-205ENST00000504078 Q6ZPB1 254 aaPredicted RBP3.43□□□□□ -1.86
USP46-205ENST00000504078 ZNF662Q6ZS27 426 aa3.43□□□□□ -1.86
USP46-205ENST00000504078 WDR53Q7Z5U6 358 aaPredicted RBP3.43□□□□□ -1.86
USP46-205ENST00000504078 RFX6Q8HWS3 928 aa3.43□□□□□ -1.86
USP46-205ENST00000504078 CRLF3Q8IUI8 442 aa3.43□□□□□ -1.86
USP46-205ENST00000504078 TMTC1Q8IUR5 882 aa3.43□□□□□ -1.86
USP46-205ENST00000504078 PSTKQ8IV42 348 aaKnown RBP3.43□□□□□ -1.86
USP46-205ENST00000504078 MCATQ8IVS2 390 aaKnown RBP3.43□□□□□ -1.86
USP46-205ENST00000504078 SIAH3Q8IW03 269 aa3.43□□□□□ -1.86
USP46-205ENST00000504078 PHC2Q8IXK0 858 aa3.43□□□□□ -1.86
USP46-205ENST00000504078 OR4N4Q8N0Y3 316 aa3.43□□□□□ -1.86
USP46-205ENST00000504078 GHDCQ8N2G8 530 aa3.43□□□□□ -1.86
USP46-205ENST00000504078 KIF2BQ8N4N8 673 aa3.43□□□□□ -1.86
USP46-205ENST00000504078 CLDN19Q8N6F1 224 aa3.43□□□□□ -1.86
USP46-205ENST00000504078 PLD5Q8N7P1 536 aa3.43□□□□□ -1.86
USP46-205ENST00000504078 LINC01555Q8NAE3 123 aa3.43□□□□□ -1.86
USP46-205ENST00000504078 MLKLQ8NB16 471 aa3.43□□□□□ -1.86
USP46-205ENST00000504078 ACBD4Q8NC06 268 aa3.43□□□□□ -1.86
USP46-205ENST00000504078 KCTD6Q8NC69 237 aa3.43□□□□□ -1.86
USP46-205ENST00000504078 MDS2Q8NDY4 140 aa3.43□□□□□ -1.86
USP46-205ENST00000504078 OR5M9Q8NGP3 310 aa3.43□□□□□ -1.86
USP46-205ENST00000504078 CFAP61Q8NHU2 1237 aa3.43□□□□□ -1.86
USP46-205ENST00000504078 ZNF398Q8TD17 642 aa3.43□□□□□ -1.86
USP46-205ENST00000504078 BRSK1Q8TDC3 778 aa3.43□□□□□ -1.86
USP46-205ENST00000504078 TRAF3IP1Q8TDR0 691 aaPredicted RBP3.43□□□□□ -1.86
USP46-205ENST00000504078 TEKT4Q8WW24 435 aa3.43□□□□□ -1.86
USP46-205ENST00000504078 ELMO1Q92556 727 aa3.43□□□□□ -1.86
USP46-205ENST00000504078 RAPGEF5Q92565 580 aa3.43□□□□□ -1.86
USP46-205ENST00000504078 TFGQ92734 400 aaPredicted RBP3.43□□□□□ -1.86
USP46-205ENST00000504078 TMEM125Q96AQ2 219 aa3.43□□□□□ -1.86
USP46-205ENST00000504078 DNAJC1Q96KC8 554 aaKnown RBP3.43□□□□□ -1.86
USP46-205ENST00000504078 CABS1Q96KC9 395 aa3.43□□□□□ -1.86
USP46-205ENST00000504078 NPAS2Q99743 824 aa3.43□□□□□ -1.86
USP46-205ENST00000504078 MIPEPQ99797 713 aa3.43□□□□□ -1.86
USP46-205ENST00000504078 TREX2Q9BQ50 279 aaPredicted RBP3.43□□□□□ -1.86
USP46-205ENST00000504078 ZNF670Q9BS34 389 aa3.43□□□□□ -1.86
USP46-205ENST00000504078 TRIM51Q9BSJ1 452 aa3.43□□□□□ -1.86
USP46-205ENST00000504078 FSD1LQ9BXM9 530 aa3.43□□□□□ -1.86
USP46-205ENST00000504078 RNF32Q9H0A6 362 aa3.43□□□□□ -1.86
USP46-205ENST00000504078 SLC25A51Q9H1U9 297 aa3.43□□□□□ -1.86
USP46-205ENST00000504078 WDR54Q9H977 334 aa3.43□□□□□ -1.86
USP46-205ENST00000504078 SYTL2Q9HCH5 934 aa3.43□□□□□ -1.86
USP46-205ENST00000504078 RIC8BQ9NVN3 520 aa3.43□□□□□ -1.86
USP46-205ENST00000504078 C19orf73Q9NVV2 129 aa3.43□□□□□ -1.86
USP46-205ENST00000504078 HAUS2Q9NVX0 235 aa3.43□□□□□ -1.86
USP46-205ENST00000504078 SMOXQ9NWM0 555 aa3.43□□□□□ -1.86
USP46-205ENST00000504078 TRMT1Q9NXH9 659 aaKnown RBP3.43□□□□□ -1.86
USP46-205ENST00000504078 IL17CQ9P0M4 197 aa3.43□□□□□ -1.86
USP46-205ENST00000504078 CAMSAP3Q9P1Y5 1249 aaPredicted RBP3.43□□□□□ -1.86
USP46-205ENST00000504078 HCN3Q9P1Z3 774 aa3.43□□□□□ -1.86
USP46-205ENST00000504078 KLHL8Q9P2G9 620 aaPredicted RBP3.43□□□□□ -1.86
USP46-205ENST00000504078 SAE1Q9UBE0 346 aaPredicted RBP3.43□□□□□ -1.86
USP46-205ENST00000504078 TRPC4Q9UBN4 977 aa3.43□□□□□ -1.86
USP46-205ENST00000504078 NXT1Q9UKK6 140 aaKnown RBP3.43□□□□□ -1.86
USP46-205ENST00000504078 ACSL5Q9ULC5 683 aa3.43□□□□□ -1.86
USP46-205ENST00000504078 R3HDM2Q9Y2K5 976 aaKnown RBP3.43□□□□□ -1.86
USP46-205ENST00000504078 ZNF835Q9Y2P0 537 aa3.43□□□□□ -1.86
USP46-205ENST00000504078 L3MBTL1Q9Y468 752 aa3.43□□□□□ -1.86
USP46-205ENST00000504078 HYOU1Q9Y4L1 999 aa3.43□□□□□ -1.86
USP46-205ENST00000504078 LIPGQ9Y5X9 500 aa3.43□□□□□ -1.86
USP46-205ENST00000504078 PRSS21Q9Y6M0 314 aa3.43□□□□□ -1.86
USP46-205ENST00000504078 ABCA2Q9BZC7 2435 aa3.43□□□□□ -1.86
USP46-205ENST00000504078 SPG11Q96JI7 2443 aa3.42□□□□□ -1.86
USP46-205ENST00000504078 A0A0A6YYC8 382 aaPredicted RBP3.42□□□□□ -1.86
USP46-205ENST00000504078 A0A0G2JMM0 328 aa3.42□□□□□ -1.86
USP46-205ENST00000504078 A0A1W2PPB8 328 aa3.42□□□□□ -1.86
USP46-205ENST00000504078 A0A1W2PRS3 328 aa3.42□□□□□ -1.86
USP46-205ENST00000504078 MACROD2A1Z1Q3 448 aa3.42□□□□□ -1.86
USP46-205ENST00000504078 TRIM64A6NGJ6 449 aa3.42□□□□□ -1.86
USP46-205ENST00000504078 ZNF860A6NHJ4 632 aa3.42□□□□□ -1.86
USP46-205ENST00000504078 TRIM64BA6NI03 449 aa3.42□□□□□ -1.86
USP46-205ENST00000504078 VSTM2BA6NLU5 285 aa3.42□□□□□ -1.86
USP46-205ENST00000504078 FAM166BA8MTA8 275 aa3.42□□□□□ -1.86
USP46-205ENST00000504078 RNF212BA8MTL3 300 aa3.42□□□□□ -1.86
USP46-205ENST00000504078 KIR3DP1A8MWS1 328 aa3.42□□□□□ -1.86
USP46-205ENST00000504078 E9PLN8 166 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms