RNA–Protein interactions for RNA: ENST00000504000.1

SNF8-203, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 1,899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-203ENST00000504000 PTCHD3Q3KNS1 767 aa14.5□□□□□ -0.09
SNF8-203ENST00000504000 PRSS55Q6UWB4 352 aaPredicted RBP14.5□□□□□ -0.09
SNF8-203ENST00000504000 ZNF621Q6ZSS3 439 aa14.5□□□□□ -0.09
SNF8-203ENST00000504000 AHSA2Q719I0 299 aa14.5□□□□□ -0.09
SNF8-203ENST00000504000 TAS1R1Q7RTX1 841 aa14.5□□□□□ -0.09
SNF8-203ENST00000504000 RNF180Q86T96 592 aa14.5□□□□□ -0.09
SNF8-203ENST00000504000 LYSMD2Q8IV50 215 aa14.5□□□□□ -0.09
SNF8-203ENST00000504000 GPR26Q8NDV2 337 aa14.5□□□□□ -0.09
SNF8-203ENST00000504000 DNASE1L2Q92874 299 aa14.5□□□□□ -0.09
SNF8-203ENST00000504000 SCRN2Q96FV2 425 aa14.5□□□□□ -0.09
SNF8-203ENST00000504000 COPS4Q9BT78 406 aa14.5□□□□□ -0.09
SNF8-203ENST00000504000 SPATA6Q9NWH7 488 aaPredicted RBP14.5□□□□□ -0.09
SNF8-203ENST00000504000 ADPRHL2Q9NX46 363 aa14.5□□□□□ -0.09
SNF8-203ENST00000504000 CCDC59Q9P031 241 aaKnown RBP14.5□□□□□ -0.09
SNF8-203ENST00000504000 GABRQQ9UN88 632 aa14.5□□□□□ -0.09
SNF8-203ENST00000504000 CLCA1A8K7I4 914 aa14.49□□□□□ -0.09
SNF8-203ENST00000504000 ADAM12O43184 909 aa14.49□□□□□ -0.09
SNF8-203ENST00000504000 GREM1O60565 184 aa14.49□□□□□ -0.09
SNF8-203ENST00000504000 SNX4O95219 450 aa14.49□□□□□ -0.09
SNF8-203ENST00000504000 IGSF6O95976 241 aa14.49□□□□□ -0.09
SNF8-203ENST00000504000 PTTG1O95997 202 aa14.49□□□□□ -0.09
SNF8-203ENST00000504000 B3GALT4O96024 378 aa14.49□□□□□ -0.09
SNF8-203ENST00000504000 LCKP06239 509 aa14.49□□□□□ -0.09
SNF8-203ENST00000504000 CDK1P06493 297 aa14.49□□□□□ -0.09
SNF8-203ENST00000504000 IRF1P10914 325 aa14.49□□□□□ -0.09
SNF8-203ENST00000504000 CYP2A7P20853 494 aa14.49□□□□□ -0.09
SNF8-203ENST00000504000 ASMTP46597 345 aa14.49□□□□□ -0.09
SNF8-203ENST00000504000 B4GALNT1Q00973 533 aa14.49□□□□□ -0.09
SNF8-203ENST00000504000 CD300CQ08708 224 aa14.49□□□□□ -0.09
SNF8-203ENST00000504000 EIF4HQ15056 248 aaKnown RBP14.49□□□□□ -0.09
SNF8-203ENST00000504000 CATSPEREQ5SY80 951 aa14.49□□□□□ -0.09
SNF8-203ENST00000504000 Q6ZNB5 142 aa14.49□□□□□ -0.09
SNF8-203ENST00000504000 SLC46A3Q7Z3Q1 461 aa14.49□□□□□ -0.09
SNF8-203ENST00000504000 ZSWIM9Q86XI8 627 aa14.49□□□□□ -0.09
SNF8-203ENST00000504000 DENND6BQ8NEG7 585 aa14.49□□□□□ -0.09
SNF8-203ENST00000504000 VPS37AQ8NEZ2 397 aa14.49□□□□□ -0.09
SNF8-203ENST00000504000 RPL3LQ92901 407 aaKnown RBP14.49□□□□□ -0.09
SNF8-203ENST00000504000 HPS1Q92902 700 aa14.49□□□□□ -0.09
SNF8-203ENST00000504000 RHNO1Q9BSD3 238 aa14.49□□□□□ -0.09
SNF8-203ENST00000504000 DOHHQ9BU89 302 aa14.49□□□□□ -0.09
SNF8-203ENST00000504000 HERC2P3Q9BVR0 1158 aa14.49□□□□□ -0.09
SNF8-203ENST00000504000 TM6SF2Q9BZW4 377 aa14.49□□□□□ -0.09
SNF8-203ENST00000504000 TPT1P8Q9HAU6 139 aa14.49□□□□□ -0.09
SNF8-203ENST00000504000 SIRT5Q9NXA8 310 aa14.49□□□□□ -0.09
SNF8-203ENST00000504000 VPS29Q9UBQ0 182 aa14.49□□□□□ -0.09
SNF8-203ENST00000504000 AASSQ9UDR5 926 aa14.49□□□□□ -0.09
SNF8-203ENST00000504000 RNF6Q9Y252 685 aa14.49□□□□□ -0.09
SNF8-203ENST00000504000 TTC36A6NLP5 189 aa14.48□□□□□ -0.09
SNF8-203ENST00000504000 K7ERQ8 282 aa14.48□□□□□ -0.09
SNF8-203ENST00000504000 M0R082 166 aa14.48□□□□□ -0.09
SNF8-203ENST00000504000 ADAMDEC1O15204 470 aa14.48□□□□□ -0.09
SNF8-203ENST00000504000 SUV39H1O43463 412 aa14.48□□□□□ -0.09
SNF8-203ENST00000504000 SMAD6O43541 496 aaKnown RBP14.48□□□□□ -0.09
SNF8-203ENST00000504000 ABLIM3O94929 683 aa14.48□□□□□ -0.09
SNF8-203ENST00000504000 LRATO95237 230 aa14.48□□□□□ -0.09
SNF8-203ENST00000504000 PABPC1P11940 636 aaKnown RBP14.48□□□□□ -0.09
SNF8-203ENST00000504000 ANXA8P13928 327 aa14.48□□□□□ -0.09
SNF8-203ENST00000504000 COX7A2P14406 83 aa14.48□□□□□ -0.09
SNF8-203ENST00000504000 CCND3P30281 292 aaPredicted RBP14.48□□□□□ -0.09
SNF8-203ENST00000504000 OR1D2P34982 312 aa14.48□□□□□ -0.09
SNF8-203ENST00000504000 PCGF2P35227 344 aa14.48□□□□□ -0.09
SNF8-203ENST00000504000 LIPAP38571 399 aa14.48□□□□□ -0.09
SNF8-203ENST00000504000 ETV6P41212 452 aa14.48□□□□□ -0.09
SNF8-203ENST00000504000 OLR1P78380 273 aa14.48□□□□□ -0.09
SNF8-203ENST00000504000 ANXA8L1Q5VT79 327 aa14.48□□□□□ -0.09
SNF8-203ENST00000504000 PNCKQ6P2M8 343 aa14.48□□□□□ -0.09
SNF8-203ENST00000504000 CRTC1Q6UUV9 634 aa14.48□□□□□ -0.09
SNF8-203ENST00000504000 FAM124AQ86V42 546 aa14.48□□□□□ -0.09
SNF8-203ENST00000504000 CRIPAKQ8N1N5 446 aa14.48□□□□□ -0.09
SNF8-203ENST00000504000 DEPDC4Q8N2C3 294 aa14.48□□□□□ -0.09
SNF8-203ENST00000504000 DNAJC22Q8N4W6 341 aa14.48□□□□□ -0.09
SNF8-203ENST00000504000 SLC43A3Q8NBI5 491 aa14.48□□□□□ -0.09
SNF8-203ENST00000504000 KBTBD8Q8NFY9 601 aa14.48□□□□□ -0.09
SNF8-203ENST00000504000 WDR20Q8TBZ3 569 aa14.48□□□□□ -0.09
SNF8-203ENST00000504000 PYCR2Q96C36 320 aa14.48□□□□□ -0.09
SNF8-203ENST00000504000 ECHDC3Q96DC8 303 aa14.48□□□□□ -0.09
SNF8-203ENST00000504000 BRF2Q9HAW0 419 aa14.48□□□□□ -0.09
SNF8-203ENST00000504000 RASSF1Q9NS23 344 aa14.48□□□□□ -0.09
SNF8-203ENST00000504000 ABCB8Q9NUT2 735 aa14.48□□□□□ -0.09
SNF8-203ENST00000504000 SPASTQ9UBP0 616 aa14.48□□□□□ -0.09
SNF8-203ENST00000504000 ERVK-11Q9UQG0 969 aa14.48□□□□□ -0.09
SNF8-203ENST00000504000 PIKFYVEQ9Y2I7 2098 aa14.48□□□□□ -0.09
SNF8-203ENST00000504000 C1orf226A1L170 272 aa14.48□□□□□ -0.09
SNF8-203ENST00000504000 C2orf78A6NCI8 922 aa14.48□□□□□ -0.09
SNF8-203ENST00000504000 PRAMEF4O60810 478 aa14.48□□□□□ -0.09
SNF8-203ENST00000504000 RFPL2O75678 378 aa14.48□□□□□ -0.09
SNF8-203ENST00000504000 MYO1DO94832 1006 aa14.48□□□□□ -0.09
SNF8-203ENST00000504000 RPLP0P05388 317 aaKnown RBP14.48□□□□□ -0.09
SNF8-203ENST00000504000 SMAD3P84022 425 aaKnown RBP14.48□□□□□ -0.09
SNF8-203ENST00000504000 MPP7Q5T2T1 576 aa14.48□□□□□ -0.09
SNF8-203ENST00000504000 DEPDC1Q5TB30 811 aa14.48□□□□□ -0.09
SNF8-203ENST00000504000 PRAMEF9Q5VWM5 478 aa14.48□□□□□ -0.09
SNF8-203ENST00000504000 TPGS2Q68CL5 300 aa14.48□□□□□ -0.09
SNF8-203ENST00000504000 SNX29P2Q8IUI4 249 aa14.48□□□□□ -0.09
SNF8-203ENST00000504000 KLHDC8AQ8IYD2 350 aa14.48□□□□□ -0.09
SNF8-203ENST00000504000 ZNF461Q8TAF7 563 aa14.48□□□□□ -0.09
SNF8-203ENST00000504000 CRELD1Q96HD1 420 aa14.48□□□□□ -0.09
SNF8-203ENST00000504000 MCCC1Q96RQ3 725 aaPredicted RBP14.48□□□□□ -0.09
SNF8-203ENST00000504000 SLC22A14Q9Y267 594 aa14.48□□□□□ -0.09
SNF8-203ENST00000504000 KLK4Q9Y5K2 254 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms