RNA–Protein interactions for RNA: ENST00000503346.1

PDLIM7-209, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-209ENST00000503346 GRK3P35626 688 aa17.4■□□□□ 0.38
PDLIM7-209ENST00000503346 VSNL1P62760 191 aa17.4■□□□□ 0.38
PDLIM7-209ENST00000503346 ACAP2Q15057 778 aa17.4■□□□□ 0.38
PDLIM7-209ENST00000503346 NCF4Q15080 339 aa17.4■□□□□ 0.38
PDLIM7-209ENST00000503346 C18orf21Q32NC0 220 aaPredicted RBP17.4■□□□□ 0.38
PDLIM7-209ENST00000503346 NKAIN1Q4KMZ8 207 aa17.4■□□□□ 0.38
PDLIM7-209ENST00000503346 LGSNQ5TDP6 509 aa17.4■□□□□ 0.38
PDLIM7-209ENST00000503346 CNPY4Q8N129 248 aa17.4■□□□□ 0.38
PDLIM7-209ENST00000503346 ARHGEF39Q8N4T4 335 aa17.4■□□□□ 0.38
PDLIM7-209ENST00000503346 GPR78Q96P69 363 aa17.4■□□□□ 0.38
PDLIM7-209ENST00000503346 VPS11Q9H270 941 aa17.4■□□□□ 0.38
PDLIM7-209ENST00000503346 ACTL8Q9H568 366 aa17.4■□□□□ 0.38
PDLIM7-209ENST00000503346 CNOT10Q9H9A5 744 aaKnown RBP17.4■□□□□ 0.38
PDLIM7-209ENST00000503346 WWOXQ9NZC7 414 aa17.4■□□□□ 0.38
PDLIM7-209ENST00000503346 NUDT4Q9NZJ9 180 aa17.4■□□□□ 0.38
PDLIM7-209ENST00000503346 CD274Q9NZQ7 290 aa17.4■□□□□ 0.38
PDLIM7-209ENST00000503346 PTBP2Q9UKA9 531 aaKnown RBP17.4■□□□□ 0.38
PDLIM7-209ENST00000503346 C9J4A7 227 aa17.39■□□□□ 0.37
PDLIM7-209ENST00000503346 CREG1O75629 220 aa17.39■□□□□ 0.37
PDLIM7-209ENST00000503346 WDR47O94967 919 aa17.39■□□□□ 0.37
PDLIM7-209ENST00000503346 MED26O95402 600 aa17.39■□□□□ 0.37
PDLIM7-209ENST00000503346 S100BP04271 92 aaPredicted RBP17.39■□□□□ 0.37
PDLIM7-209ENST00000503346 ITGB2P05107 769 aa17.39■□□□□ 0.37
PDLIM7-209ENST00000503346 ITGAXP20702 1163 aa17.39■□□□□ 0.37
PDLIM7-209ENST00000503346 BCL6P41182 706 aa17.39■□□□□ 0.37
PDLIM7-209ENST00000503346 GDF5P43026 501 aa17.39■□□□□ 0.37
PDLIM7-209ENST00000503346 CYP4F2P78329 520 aa17.39■□□□□ 0.37
PDLIM7-209ENST00000503346 CDC20Q12834 499 aa17.39■□□□□ 0.37
PDLIM7-209ENST00000503346 MUM1Q2TAK8 710 aa17.39■□□□□ 0.37
PDLIM7-209ENST00000503346 CATSPEREQ5SY80 951 aa17.39■□□□□ 0.37
PDLIM7-209ENST00000503346 GARNL3Q5VVW2 1013 aa17.39■□□□□ 0.37
PDLIM7-209ENST00000503346 WDR93Q6P2C0 686 aa17.39■□□□□ 0.37
PDLIM7-209ENST00000503346 TIFABQ6ZNK6 161 aa17.39■□□□□ 0.37
PDLIM7-209ENST00000503346 VN1R4Q7Z5H5 301 aa17.39■□□□□ 0.37
PDLIM7-209ENST00000503346 SYVN1Q86TM6 617 aa17.39■□□□□ 0.37
PDLIM7-209ENST00000503346 ENDOVQ8N8Q3 282 aaKnown RBP17.39■□□□□ 0.37
PDLIM7-209ENST00000503346 TTC9Q92623 222 aa17.39■□□□□ 0.37
PDLIM7-209ENST00000503346 MTBPQ96DY7 904 aa17.39■□□□□ 0.37
PDLIM7-209ENST00000503346 C10orf90Q96M02 699 aa17.39■□□□□ 0.37
PDLIM7-209ENST00000503346 TSNARE1Q96NA8 513 aa17.39■□□□□ 0.37
PDLIM7-209ENST00000503346 CATSPER2Q96P56 530 aa17.39■□□□□ 0.37
PDLIM7-209ENST00000503346 PELI2Q9HAT8 420 aa17.39■□□□□ 0.37
PDLIM7-209ENST00000503346 SLC22A11Q9NSA0 550 aa17.39■□□□□ 0.37
PDLIM7-209ENST00000503346 IFT80Q9P2H3 777 aaPredicted RBP17.39■□□□□ 0.37
PDLIM7-209ENST00000503346 RUVBL1Q9Y265 456 aaKnown RBP17.39■□□□□ 0.37
PDLIM7-209ENST00000503346 SPTBP11277 2137 aa17.38■□□□□ 0.37
PDLIM7-209ENST00000503346 TRBC2A0A5B9 178 aa17.38■□□□□ 0.37
PDLIM7-209ENST00000503346 FEZF1A0PJY2 475 aa17.38■□□□□ 0.37
PDLIM7-209ENST00000503346 SYCE1LA8MT33 242 aa17.38■□□□□ 0.37
PDLIM7-209ENST00000503346 P2RX6O15547 441 aa17.38■□□□□ 0.37
PDLIM7-209ENST00000503346 LCMT2O60294 686 aaKnown RBP17.38■□□□□ 0.37
PDLIM7-209ENST00000503346 CD63P08962 238 aa17.38■□□□□ 0.37
PDLIM7-209ENST00000503346 COL6A2P12110 1019 aa17.38■□□□□ 0.37
PDLIM7-209ENST00000503346 MTHFD2P13995 350 aa17.38■□□□□ 0.37
PDLIM7-209ENST00000503346 RPS18P62269 152 aaKnown RBP17.38■□□□□ 0.37
PDLIM7-209ENST00000503346 COL9A2Q14055 689 aaPredicted RBP17.38■□□□□ 0.37
PDLIM7-209ENST00000503346 HKDC1Q2TB90 917 aa17.38■□□□□ 0.37
PDLIM7-209ENST00000503346 PRMT9Q6P2P2 845 aa17.38■□□□□ 0.37
PDLIM7-209ENST00000503346 KLC3Q6P597 504 aa17.38■□□□□ 0.37
PDLIM7-209ENST00000503346 NXPE4Q6UWF7 544 aa17.38■□□□□ 0.37
PDLIM7-209ENST00000503346 PLD6Q8N2A8 252 aaKnown RBP17.38■□□□□ 0.37
PDLIM7-209ENST00000503346 MFSD9Q8NBP5 474 aa17.38■□□□□ 0.37
PDLIM7-209ENST00000503346 EXT2Q93063 718 aa17.38■□□□□ 0.37
PDLIM7-209ENST00000503346 MVB12AQ96EY5 273 aa17.38■□□□□ 0.37
PDLIM7-209ENST00000503346 CABS1Q96KC9 395 aa17.38■□□□□ 0.37
PDLIM7-209ENST00000503346 UBL7Q96S82 380 aaPredicted RBP17.38■□□□□ 0.37
PDLIM7-209ENST00000503346 CCDC77Q9BR77 488 aa17.38■□□□□ 0.37
PDLIM7-209ENST00000503346 CAPS2Q9BXY5 557 aa17.38■□□□□ 0.37
PDLIM7-209ENST00000503346 GPRC5BQ9NZH0 403 aa17.38■□□□□ 0.37
PDLIM7-209ENST00000503346 NDOR1Q9UHB4 597 aa17.38■□□□□ 0.37
PDLIM7-209ENST00000503346 TCFL5Q9UL49 500 aa17.38■□□□□ 0.37
PDLIM7-209ENST00000503346 SUPT3HB4E1H0 165 aa17.37■□□□□ 0.37
PDLIM7-209ENST00000503346 ERVH48-1M5A8F1 160 aa17.37■□□□□ 0.37
PDLIM7-209ENST00000503346 UBXN8O00124 270 aa17.37■□□□□ 0.37
PDLIM7-209ENST00000503346 SUPT3HO75486 399 aa17.37■□□□□ 0.37
PDLIM7-209ENST00000503346 RFPL1O75677 317 aa17.37■□□□□ 0.37
PDLIM7-209ENST00000503346 STK16O75716 305 aa17.37■□□□□ 0.37
PDLIM7-209ENST00000503346 PRKAR1AP10644 381 aa17.37■□□□□ 0.37
PDLIM7-209ENST00000503346 PIM1P11309 404 aaPredicted RBP17.37■□□□□ 0.37
PDLIM7-209ENST00000503346 GNAZP19086 355 aa17.37■□□□□ 0.37
PDLIM7-209ENST00000503346 GLRBP48167 497 aa17.37■□□□□ 0.37
PDLIM7-209ENST00000503346 HSPA7P48741 367 aa17.37■□□□□ 0.37
PDLIM7-209ENST00000503346 NFKB2Q00653 900 aa17.37■□□□□ 0.37
PDLIM7-209ENST00000503346 REEP5Q00765 189 aa17.37■□□□□ 0.37
PDLIM7-209ENST00000503346 CDC16Q13042 620 aa17.37■□□□□ 0.37
PDLIM7-209ENST00000503346 MRPL14Q6P1L8 145 aaKnown RBP17.37■□□□□ 0.37
PDLIM7-209ENST00000503346 C16orf46Q6P387 395 aa17.37■□□□□ 0.37
PDLIM7-209ENST00000503346 TMPRSS11BQ86T26 416 aa17.37■□□□□ 0.37
PDLIM7-209ENST00000503346 TBC1D19Q8N5T2 526 aa17.37■□□□□ 0.37
PDLIM7-209ENST00000503346 CAMKVQ8NCB2 501 aa17.37■□□□□ 0.37
PDLIM7-209ENST00000503346 UBTD2Q8WUN7 234 aa17.37■□□□□ 0.37
PDLIM7-209ENST00000503346 UBLCP1Q8WVY7 318 aaPredicted RBP17.37■□□□□ 0.37
PDLIM7-209ENST00000503346 FKBP10Q96AY3 582 aa17.37■□□□□ 0.37
PDLIM7-209ENST00000503346 TM4SF19Q96DZ7 209 aa17.37■□□□□ 0.37
PDLIM7-209ENST00000503346 CD244Q9BZW8 370 aa17.37■□□□□ 0.37
PDLIM7-209ENST00000503346 DNAJC11Q9NVH1 559 aa17.37■□□□□ 0.37
PDLIM7-209ENST00000503346 PSMC3IPQ9P2W1 217 aaPredicted RBP17.37■□□□□ 0.37
PDLIM7-209ENST00000503346 GPN3Q9UHW5 284 aaPredicted RBP17.37■□□□□ 0.37
PDLIM7-209ENST00000503346 PADI2Q9Y2J8 665 aa17.37■□□□□ 0.37
PDLIM7-209ENST00000503346 LOC400499M0QZD8 3231 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms