RNA–Protein interactions for RNA: ENST00000502802.1

HMGB1P3-201, Transcript of high mobility group box 1 pseudogene 3, humanhuman

BASIC

Gene HMGB1P3, Length 616 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P3-201ENST00000502802 UGGT2Q9NYU1 1516 aa4.87□□□□□ -1.63
HMGB1P3-201ENST00000502802 KIAA0556O60303 1618 aa4.87□□□□□ -1.63
HMGB1P3-201ENST00000502802 H0YIG0 161 aa4.87□□□□□ -1.63
HMGB1P3-201ENST00000502802 ZBTB11O95625 1053 aaPredicted RBP4.87□□□□□ -1.63
HMGB1P3-201ENST00000502802 APOHP02749 345 aaPredicted RBP4.87□□□□□ -1.63
HMGB1P3-201ENST00000502802 ABHD2P08910 425 aa4.87□□□□□ -1.63
HMGB1P3-201ENST00000502802 DLATP10515 647 aaKnown RBP4.87□□□□□ -1.63
HMGB1P3-201ENST00000502802 MSH3P20585 1137 aa4.87□□□□□ -1.63
HMGB1P3-201ENST00000502802 CA4P22748 312 aa4.87□□□□□ -1.63
HMGB1P3-201ENST00000502802 CSTF2P33240 577 aaKnown RBP eCLIP4.87□□□□□ -1.63
HMGB1P3-201ENST00000502802 NR2C2P49116 596 aa4.87□□□□□ -1.63
HMGB1P3-201ENST00000502802 MAZP56270 477 aaKnown RBP4.87□□□□□ -1.63
HMGB1P3-201ENST00000502802 SLC34A1Q06495 639 aa4.87□□□□□ -1.63
HMGB1P3-201ENST00000502802 TRAP1Q12931 704 aaKnown RBP4.87□□□□□ -1.63
HMGB1P3-201ENST00000502802 PDK1Q15118 436 aa4.87□□□□□ -1.63
HMGB1P3-201ENST00000502802 STXBP2Q15833 593 aa4.87□□□□□ -1.63
HMGB1P3-201ENST00000502802 CCDC142Q17RM4 750 aa4.87□□□□□ -1.63
HMGB1P3-201ENST00000502802 DNAJC21Q5F1R6 531 aaKnown RBP4.87□□□□□ -1.63
HMGB1P3-201ENST00000502802 SLC35D3Q5M8T2 416 aa4.87□□□□□ -1.63
HMGB1P3-201ENST00000502802 DCAF10Q5QP82 559 aa4.87□□□□□ -1.63
HMGB1P3-201ENST00000502802 PM20D1Q6GTS8 502 aa4.87□□□□□ -1.63
HMGB1P3-201ENST00000502802 ZNF770Q6IQ21 691 aaPredicted RBP4.87□□□□□ -1.63
HMGB1P3-201ENST00000502802 TTC27Q6P3X3 843 aa4.87□□□□□ -1.63
HMGB1P3-201ENST00000502802 CTR9Q6PD62 1173 aa4.87□□□□□ -1.63
HMGB1P3-201ENST00000502802 ZNF852Q6ZMS4 543 aa4.87□□□□□ -1.63
HMGB1P3-201ENST00000502802 ASPGQ86U10 573 aa4.87□□□□□ -1.63
HMGB1P3-201ENST00000502802 MAPKAPK5-AS1Q8N8E1 139 aa4.87□□□□□ -1.63
HMGB1P3-201ENST00000502802 URGCPQ8TCY9 931 aa4.87□□□□□ -1.63
HMGB1P3-201ENST00000502802 SLC47A1Q96FL8 570 aa4.87□□□□□ -1.63
HMGB1P3-201ENST00000502802 NSL1Q96IY1 281 aa4.87□□□□□ -1.63
HMGB1P3-201ENST00000502802 FCRL4Q96PJ5 515 aa4.87□□□□□ -1.63
HMGB1P3-201ENST00000502802 NAP1L3Q99457 506 aaPredicted RBP4.87□□□□□ -1.63
HMGB1P3-201ENST00000502802 TMEM204Q9BSN7 226 aa4.87□□□□□ -1.63
HMGB1P3-201ENST00000502802 XPO4Q9C0E2 1151 aaKnown RBP4.87□□□□□ -1.63
HMGB1P3-201ENST00000502802 MTMR12Q9C0I1 747 aa4.87□□□□□ -1.63
HMGB1P3-201ENST00000502802 NAPBQ9H115 298 aa4.87□□□□□ -1.63
HMGB1P3-201ENST00000502802 RIMS4Q9H426 269 aaPredicted RBP4.87□□□□□ -1.63
HMGB1P3-201ENST00000502802 C10orf88Q9H8K7 445 aa4.87□□□□□ -1.63
HMGB1P3-201ENST00000502802 MAGEF1Q9HAY2 307 aa4.87□□□□□ -1.63
HMGB1P3-201ENST00000502802 SDR39U1Q9NRG7 319 aaPredicted RBP4.87□□□□□ -1.63
HMGB1P3-201ENST00000502802 MRPL17Q9NRX2 175 aaKnown RBP4.87□□□□□ -1.63
HMGB1P3-201ENST00000502802 GPR173Q9NS66 373 aa4.87□□□□□ -1.63
HMGB1P3-201ENST00000502802 FAM207AQ9NSI2 230 aaPredicted RBP4.87□□□□□ -1.63
HMGB1P3-201ENST00000502802 NINJ2Q9NZG7 142 aa4.87□□□□□ -1.63
HMGB1P3-201ENST00000502802 MTF2Q9Y483 593 aaPredicted RBP4.87□□□□□ -1.63
HMGB1P3-201ENST00000502802 PFASO15067 1338 aa4.87□□□□□ -1.63
HMGB1P3-201ENST00000502802 IL16Q14005 1332 aa4.87□□□□□ -1.63
HMGB1P3-201ENST00000502802 UHRF1BP1LA0JNW5 1464 aa4.87□□□□□ -1.63
HMGB1P3-201ENST00000502802 GLI2P10070 1586 aa4.87□□□□□ -1.63
HMGB1P3-201ENST00000502802 MAP3K4Q9Y6R4 1608 aa4.86□□□□□ -1.63
HMGB1P3-201ENST00000502802 ARID2Q68CP9 1835 aa4.86□□□□□ -1.63
HMGB1P3-201ENST00000502802 TRAV18A0A075B6X5 111 aa4.86□□□□□ -1.63
HMGB1P3-201ENST00000502802 TRBV2A0A0J9YWF9 115 aa4.86□□□□□ -1.63
HMGB1P3-201ENST00000502802 LOC101059948A0A1B0GTJ6 334 aa4.86□□□□□ -1.63
HMGB1P3-201ENST00000502802 O00370 1275 aa4.86□□□□□ -1.63
HMGB1P3-201ENST00000502802 REC8O95072 547 aa4.86□□□□□ -1.63
HMGB1P3-201ENST00000502802 LETM1O95202 739 aaPredicted RBP4.86□□□□□ -1.63
HMGB1P3-201ENST00000502802 ALPPP05187 535 aa4.86□□□□□ -1.63
HMGB1P3-201ENST00000502802 ALPPL2P10696 532 aa4.86□□□□□ -1.63
HMGB1P3-201ENST00000502802 FGF5P12034 268 aa4.86□□□□□ -1.63
HMGB1P3-201ENST00000502802 SFTPDP35247 375 aa4.86□□□□□ -1.63
HMGB1P3-201ENST00000502802 SMSP52788 366 aa4.86□□□□□ -1.63
HMGB1P3-201ENST00000502802 EVCP57679 992 aa4.86□□□□□ -1.63
HMGB1P3-201ENST00000502802 DSCR9P59020 149 aa4.86□□□□□ -1.63
HMGB1P3-201ENST00000502802 CETN1Q12798 172 aa4.86□□□□□ -1.63
HMGB1P3-201ENST00000502802 PDE7AQ13946 482 aa4.86□□□□□ -1.63
HMGB1P3-201ENST00000502802 AGAP6Q5VW22 663 aa4.86□□□□□ -1.63
HMGB1P3-201ENST00000502802 KRTAP1-3Q8IUG1 177 aa4.86□□□□□ -1.63
HMGB1P3-201ENST00000502802 TMEM126BQ8IUX1 230 aa4.86□□□□□ -1.63
HMGB1P3-201ENST00000502802 TEX9Q8N6V9 391 aa4.86□□□□□ -1.63
HMGB1P3-201ENST00000502802 MRPL43Q8N983 215 aaKnown RBP4.86□□□□□ -1.63
HMGB1P3-201ENST00000502802 LMNTD1Q8N9Z9 388 aa4.86□□□□□ -1.63
HMGB1P3-201ENST00000502802 ANKRD20A12PQ8NF67 263 aa4.86□□□□□ -1.63
HMGB1P3-201ENST00000502802 SORCS1Q8WY21 1168 aa4.86□□□□□ -1.63
HMGB1P3-201ENST00000502802 TAF4BQ92750 862 aa4.86□□□□□ -1.63
HMGB1P3-201ENST00000502802 SCRN2Q96FV2 425 aa4.86□□□□□ -1.63
HMGB1P3-201ENST00000502802 ZNF560Q96MR9 790 aa4.86□□□□□ -1.63
HMGB1P3-201ENST00000502802 HPF1Q9NWY4 346 aa4.86□□□□□ -1.63
HMGB1P3-201ENST00000502802 EPS15L1Q9UBC2 864 aa4.86□□□□□ -1.63
HMGB1P3-201ENST00000502802 TRMT6Q9UJA5 497 aaKnown RBP4.86□□□□□ -1.63
HMGB1P3-201ENST00000502802 PIN4Q9Y237 131 aaKnown RBP4.86□□□□□ -1.63
HMGB1P3-201ENST00000502802 EXOC6BQ9Y2D4 811 aa4.86□□□□□ -1.63
HMGB1P3-201ENST00000502802 ZNF510Q9Y2H8 683 aa4.86□□□□□ -1.63
HMGB1P3-201ENST00000502802 STRAPQ9Y3F4 350 aaKnown RBP4.86□□□□□ -1.63
HMGB1P3-201ENST00000502802 UACAQ9BZF9 1416 aa4.86□□□□□ -1.63
HMGB1P3-201ENST00000502802 KDM5BQ9UGL1 1544 aa4.86□□□□□ -1.63
HMGB1P3-201ENST00000502802 A0A087X0K7 114 aa4.85□□□□□ -1.63
HMGB1P3-201ENST00000502802 SCO2O43819 266 aa4.85□□□□□ -1.63
HMGB1P3-201ENST00000502802 PRDM1O75626 825 aa4.85□□□□□ -1.63
HMGB1P3-201ENST00000502802 SLC4A1P02730 911 aa4.85□□□□□ -1.63
HMGB1P3-201ENST00000502802 GP1BBP13224 206 aa4.85□□□□□ -1.63
HMGB1P3-201ENST00000502802 EFNA1P20827 205 aaPredicted RBP4.85□□□□□ -1.63
HMGB1P3-201ENST00000502802 DGKAP23743 735 aa4.85□□□□□ -1.63
HMGB1P3-201ENST00000502802 FMO5P49326 533 aa4.85□□□□□ -1.63
HMGB1P3-201ENST00000502802 ZNF132P52740 706 aa4.85□□□□□ -1.63
HMGB1P3-201ENST00000502802 ABRQ12979 859 aa4.85□□□□□ -1.63
HMGB1P3-201ENST00000502802 TRA2AQ13595 282 aaKnown RBP eCLIP4.85□□□□□ -1.63
HMGB1P3-201ENST00000502802 TAF13Q15543 124 aa4.85□□□□□ -1.63
HMGB1P3-201ENST00000502802 ACKR1Q16570 336 aa4.85□□□□□ -1.63
HMGB1P3-201ENST00000502802 KLHL10Q6JEL2 608 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms