RNA–Protein interactions for RNA: ENST00000502773.5

PDGFC-203, Transcript of platelet derived growth factor C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFC, Length 4,165 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-203ENST00000502773 OR8J2Q8NGG1 315 aa7.18□□□□□ -1.26
PDGFC-203ENST00000502773 MYEOVQ96EZ4 313 aa7.18□□□□□ -1.26
PDGFC-203ENST00000502773 MED8Q96G25 268 aa7.18□□□□□ -1.26
PDGFC-203ENST00000502773 DUSP26Q9BV47 211 aa7.18□□□□□ -1.26
PDGFC-203ENST00000502773 NLNQ9BYT8 704 aa7.18□□□□□ -1.26
PDGFC-203ENST00000502773 TPK1Q9H3S4 243 aa7.18□□□□□ -1.26
PDGFC-203ENST00000502773 PELI2Q9HAT8 420 aa7.18□□□□□ -1.26
PDGFC-203ENST00000502773 SPASTQ9UBP0 616 aa7.18□□□□□ -1.26
PDGFC-203ENST00000502773 SCML1Q9UN30 329 aa7.18□□□□□ -1.26
PDGFC-203ENST00000502773 EP400Q96L91 3159 aa7.18□□□□□ -1.26
PDGFC-203ENST00000502773 K7ERQ8 282 aa7.18□□□□□ -1.26
PDGFC-203ENST00000502773 F7P08709 466 aaPredicted RBP7.18□□□□□ -1.26
PDGFC-203ENST00000502773 SPATA31D3P0C874 917 aa7.18□□□□□ -1.26
PDGFC-203ENST00000502773 SOX11P35716 441 aa7.18□□□□□ -1.26
PDGFC-203ENST00000502773 CD97P48960 835 aa7.18□□□□□ -1.26
PDGFC-203ENST00000502773 DEFB103AP81534 67 aa7.18□□□□□ -1.26
PDGFC-203ENST00000502773 SGCGQ13326 291 aa7.18□□□□□ -1.26
PDGFC-203ENST00000502773 TMEM52BQ4KMG9 183 aa7.18□□□□□ -1.26
PDGFC-203ENST00000502773 C6orf52Q5T4I8 152 aa7.18□□□□□ -1.26
PDGFC-203ENST00000502773 SPATA31D4Q6ZUB0 917 aa7.18□□□□□ -1.26
PDGFC-203ENST00000502773 CARM1Q86X55 608 aa7.18□□□□□ -1.26
PDGFC-203ENST00000502773 DCUN1D3Q8IWE4 304 aa7.18□□□□□ -1.26
PDGFC-203ENST00000502773 CLDN19Q8N6F1 224 aa7.18□□□□□ -1.26
PDGFC-203ENST00000502773 OR2A12Q8NGT7 310 aa7.18□□□□□ -1.26
PDGFC-203ENST00000502773 SP7Q8TDD2 431 aaPredicted RBP7.18□□□□□ -1.26
PDGFC-203ENST00000502773 FCGR1BQ92637 280 aa7.18□□□□□ -1.26
PDGFC-203ENST00000502773 PPCDCQ96CD2 204 aa7.18□□□□□ -1.26
PDGFC-203ENST00000502773 ROGDIQ9GZN7 287 aa7.18□□□□□ -1.26
PDGFC-203ENST00000502773 TRIT1Q9H3H1 467 aaKnown RBP7.18□□□□□ -1.26
PDGFC-203ENST00000502773 MIEF1Q9NQG6 463 aa7.18□□□□□ -1.26
PDGFC-203ENST00000502773 ACSS2Q9NR19 701 aa7.18□□□□□ -1.26
PDGFC-203ENST00000502773 MED16Q9Y2X0 877 aa7.18□□□□□ -1.26
PDGFC-203ENST00000502773 TBC1D3BA6NDS4 549 aa7.17□□□□□ -1.26
PDGFC-203ENST00000502773 M0R3G1 203 aa7.17□□□□□ -1.26
PDGFC-203ENST00000502773 KMOO15229 486 aa7.17□□□□□ -1.26
PDGFC-203ENST00000502773 TPST1O60507 370 aa7.17□□□□□ -1.26
PDGFC-203ENST00000502773 FABP3P05413 133 aa7.17□□□□□ -1.26
PDGFC-203ENST00000502773 ANXA4P09525 319 aaPredicted RBP7.17□□□□□ -1.26
PDGFC-203ENST00000502773 TIMP2P16035 220 aa7.17□□□□□ -1.26
PDGFC-203ENST00000502773 ZNF10P21506 573 aaPredicted RBP7.17□□□□□ -1.26
PDGFC-203ENST00000502773 TCEA1P23193 301 aaKnown RBP7.17□□□□□ -1.26
PDGFC-203ENST00000502773 PPP2R1BP30154 601 aa7.17□□□□□ -1.26
PDGFC-203ENST00000502773 DNAJA1P31689 397 aaKnown RBP7.17□□□□□ -1.26
PDGFC-203ENST00000502773 CDKN1CP49918 316 aaPredicted RBP7.17□□□□□ -1.26
PDGFC-203ENST00000502773 HK3P52790 923 aa7.17□□□□□ -1.26
PDGFC-203ENST00000502773 GBX1Q14549 363 aa7.17□□□□□ -1.26
PDGFC-203ENST00000502773 HEPACAMQ14CZ8 416 aa7.17□□□□□ -1.26
PDGFC-203ENST00000502773 ZNF630Q2M218 657 aaPredicted RBP7.17□□□□□ -1.26
PDGFC-203ENST00000502773 USP39Q53GS9 565 aaKnown RBP7.17□□□□□ -1.26
PDGFC-203ENST00000502773 CPZQ66K79 652 aa7.17□□□□□ -1.26
PDGFC-203ENST00000502773 SCIMPQ6UWF3 145 aa7.17□□□□□ -1.26
PDGFC-203ENST00000502773 GPR149Q86SP6 731 aa7.17□□□□□ -1.26
PDGFC-203ENST00000502773 RETREG3Q86VR2 466 aa7.17□□□□□ -1.26
PDGFC-203ENST00000502773 TRIM69Q86WT6 500 aa7.17□□□□□ -1.26
PDGFC-203ENST00000502773 TMEM25Q86YD3 366 aa7.17□□□□□ -1.26
PDGFC-203ENST00000502773 CHERPQ8IWX8 916 aaKnown RBP7.17□□□□□ -1.26
PDGFC-203ENST00000502773 ASB12Q8WXK4 309 aa7.17□□□□□ -1.26
PDGFC-203ENST00000502773 SMARCD2Q92925 531 aa7.17□□□□□ -1.26
PDGFC-203ENST00000502773 LINC00615Q96LM1 132 aaPredicted RBP7.17□□□□□ -1.26
PDGFC-203ENST00000502773 APOLD1Q96LR9 279 aa7.17□□□□□ -1.26
PDGFC-203ENST00000502773 DACH2Q96NX9 599 aa7.17□□□□□ -1.26
PDGFC-203ENST00000502773 NT5DC2Q9H857 520 aa7.17□□□□□ -1.26
PDGFC-203ENST00000502773 SIRT5Q9NXA8 310 aa7.17□□□□□ -1.26
PDGFC-203ENST00000502773 ZNHIT2Q9UHR6 403 aa7.17□□□□□ -1.26
PDGFC-203ENST00000502773 NCKAP1Q9Y2A7 1128 aa7.17□□□□□ -1.26
PDGFC-203ENST00000502773 PCDHGB3Q9Y5G1 929 aa7.17□□□□□ -1.26
PDGFC-203ENST00000502773 CACNB4O00305 520 aaPredicted RBP7.17□□□□□ -1.26
PDGFC-203ENST00000502773 GREM1O60565 184 aa7.17□□□□□ -1.26
PDGFC-203ENST00000502773 C1SP09871 688 aa7.17□□□□□ -1.26
PDGFC-203ENST00000502773 C1GALT1C1LP0DN25 315 aa7.17□□□□□ -1.26
PDGFC-203ENST00000502773 ANXA8P13928 327 aa7.17□□□□□ -1.26
PDGFC-203ENST00000502773 SLC9A3P48764 834 aa7.17□□□□□ -1.26
PDGFC-203ENST00000502773 ARFIP1P53367 373 aa7.17□□□□□ -1.26
PDGFC-203ENST00000502773 TRA2BP62995 288 aaKnown RBP7.17□□□□□ -1.26
PDGFC-203ENST00000502773 CBX2Q14781 532 aaPredicted RBP7.17□□□□□ -1.26
PDGFC-203ENST00000502773 SKIV2LQ15477 1246 aaKnown RBP7.17□□□□□ -1.26
PDGFC-203ENST00000502773 CDKN3Q16667 212 aa7.17□□□□□ -1.26
PDGFC-203ENST00000502773 HNRNPA1L2Q32P51 320 aaKnown RBP7.17□□□□□ -1.26
PDGFC-203ENST00000502773 HENMT1Q5T8I9 393 aaKnown RBP7.17□□□□□ -1.26
PDGFC-203ENST00000502773 ERN2Q76MJ5 926 aaKnown RBP7.17□□□□□ -1.26
PDGFC-203ENST00000502773 P3H2Q8IVL5 708 aa7.17□□□□□ -1.26
PDGFC-203ENST00000502773 ADGRG2Q8IZP9 1017 aa7.17□□□□□ -1.26
PDGFC-203ENST00000502773 OR10A6Q8NH74 314 aa7.17□□□□□ -1.26
PDGFC-203ENST00000502773 AUTS2Q8WXX7 1259 aa7.17□□□□□ -1.26
PDGFC-203ENST00000502773 GTF2H4Q92759 462 aa7.17□□□□□ -1.26
PDGFC-203ENST00000502773 FKBP10Q96AY3 582 aa7.17□□□□□ -1.26
PDGFC-203ENST00000502773 DTD2Q96FN9 168 aa7.17□□□□□ -1.26
PDGFC-203ENST00000502773 HDAC8Q9BY41 377 aa7.17□□□□□ -1.26
PDGFC-203ENST00000502773 PRRG3Q9BZD7 231 aa7.17□□□□□ -1.26
PDGFC-203ENST00000502773 RPRD1BQ9NQG5 326 aaKnown RBP7.17□□□□□ -1.26
PDGFC-203ENST00000502773 SLC13A4Q9UKG4 626 aa7.17□□□□□ -1.26
PDGFC-203ENST00000502773 PSME2Q9UL46 239 aa7.17□□□□□ -1.26
PDGFC-203ENST00000502773 PCDHB11Q9Y5F2 797 aa7.17□□□□□ -1.26
PDGFC-203ENST00000502773 PCDHGA2Q9Y5H1 932 aa7.17□□□□□ -1.26
PDGFC-203ENST00000502773 A0A1W2PQ72 361 aa7.17□□□□□ -1.26
PDGFC-203ENST00000502773 IQCF5A8MTL0 148 aa7.17□□□□□ -1.26
PDGFC-203ENST00000502773 C5orf67F2Z3F1 127 aa7.17□□□□□ -1.26
PDGFC-203ENST00000502773 CLIC1O00299 241 aa7.17□□□□□ -1.26
PDGFC-203ENST00000502773 RNASET2O00584 256 aaKnown RBP7.17□□□□□ -1.26
PDGFC-203ENST00000502773 TAPBPO15533 448 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms