RNA–Protein interactions for RNA: ENST00000502717.5

HMGXB3-201, Transcript of HMG-box containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGXB3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-201ENST00000502717 GRSF1Q12849 480 aaKnown RBP eCLIP16.74■□□□□ 0.272e-8■■■□□ 18.5
HMGXB3-201ENST00000502717 PTGR1Q14914 329 aa16.74■□□□□ 0.27
HMGXB3-201ENST00000502717 SNX20Q7Z614 316 aa16.74■□□□□ 0.27
HMGXB3-201ENST00000502717 MARCH9Q86YJ5 346 aa16.74■□□□□ 0.27
HMGXB3-201ENST00000502717 DCP2Q8IU60 420 aaKnown RBP16.74■□□□□ 0.27
HMGXB3-201ENST00000502717 DTWD1Q8N5C7 304 aa16.74■□□□□ 0.27
HMGXB3-201ENST00000502717 HS3ST4Q9Y661 456 aa16.74■□□□□ 0.27
HMGXB3-201ENST00000502717 TREHO43280 583 aa16.73■□□□□ 0.27
HMGXB3-201ENST00000502717 CRYZL1O95825 349 aa16.73■□□□□ 0.27
HMGXB3-201ENST00000502717 S100A6P06703 90 aa16.73■□□□□ 0.27
HMGXB3-201ENST00000502717 CDKN2DP55273 166 aa16.73■□□□□ 0.27
HMGXB3-201ENST00000502717 PITX1P78337 314 aaPredicted RBP16.73■□□□□ 0.27
HMGXB3-201ENST00000502717 UBE2UQ5VVX9 321 aa16.73■□□□□ 0.27
HMGXB3-201ENST00000502717 ZFP3Q96NJ6 502 aa16.73■□□□□ 0.27
HMGXB3-201ENST00000502717 A0A1B0GVM2 712 aa16.73■□□□□ 0.27
HMGXB3-201ENST00000502717 IQCF5A8MTL0 148 aa16.73■□□□□ 0.27
HMGXB3-201ENST00000502717 ERAL1O75616 437 aaKnown RBP16.73■□□□□ 0.27
HMGXB3-201ENST00000502717 FGF19O95750 216 aa16.73■□□□□ 0.27
HMGXB3-201ENST00000502717 IFNGP01579 166 aa16.73■□□□□ 0.27
HMGXB3-201ENST00000502717 OR4Q2P0C623 313 aa16.73■□□□□ 0.27
HMGXB3-201ENST00000502717 FDXRP22570 491 aa16.73■□□□□ 0.27
HMGXB3-201ENST00000502717 RYKP34925 604 aa16.73■□□□□ 0.27
HMGXB3-201ENST00000502717 MAGEA3P43357 314 aa16.73■□□□□ 0.27
HMGXB3-201ENST00000502717 CAPZA2P47755 286 aa16.73■□□□□ 0.27
HMGXB3-201ENST00000502717 HNMTP50135 292 aa16.73■□□□□ 0.27
HMGXB3-201ENST00000502717 VMACQ2NL98 169 aa16.73■□□□□ 0.27
HMGXB3-201ENST00000502717 KLHL36Q8N4N3 616 aa16.73■□□□□ 0.27
HMGXB3-201ENST00000502717 AQP11Q8NBQ7 271 aa16.73■□□□□ 0.27
HMGXB3-201ENST00000502717 PIGXQ8TBF5 258 aa16.73■□□□□ 0.27
HMGXB3-201ENST00000502717 PPP1R16AQ96I34 528 aa16.73■□□□□ 0.27
HMGXB3-201ENST00000502717 BEX2Q9BXY8 128 aa16.73■□□□□ 0.27
HMGXB3-201ENST00000502717 SMOC2Q9H3U7 446 aa16.73■□□□□ 0.27
HMGXB3-201ENST00000502717 RIMKLBQ9ULI2 386 aa16.73■□□□□ 0.27
HMGXB3-201ENST00000502717 TTC24A2A3L6 582 aaPredicted RBP16.73■□□□□ 0.27
HMGXB3-201ENST00000502717 PDPK1O15530 556 aa16.73■□□□□ 0.27
HMGXB3-201ENST00000502717 CTSEP14091 401 aa16.73■□□□□ 0.27
HMGXB3-201ENST00000502717 GADD45AP24522 165 aa16.73■□□□□ 0.27
HMGXB3-201ENST00000502717 KDELR2P33947 212 aa16.73■□□□□ 0.27
HMGXB3-201ENST00000502717 ZNF267Q14586 743 aaPredicted RBP16.73■□□□□ 0.27
HMGXB3-201ENST00000502717 ZBTB6Q15916 424 aa16.73■□□□□ 0.27
HMGXB3-201ENST00000502717 PROX2Q3B8N5 592 aa16.73■□□□□ 0.27
HMGXB3-201ENST00000502717 AGAP6Q5VW22 663 aa16.73■□□□□ 0.27
HMGXB3-201ENST00000502717 KIAA1324Q6UXG2 1013 aaKnown RBP16.73■□□□□ 0.27
HMGXB3-201ENST00000502717 CHDHQ8NE62 594 aaPredicted RBP16.73■□□□□ 0.27
HMGXB3-201ENST00000502717 FRS2Q8WU20 508 aa16.73■□□□□ 0.27
HMGXB3-201ENST00000502717 CMTM7Q96FZ5 175 aa16.73■□□□□ 0.27
HMGXB3-201ENST00000502717 AHCYL2Q96HN2 611 aaKnown RBP16.73■□□□□ 0.27
HMGXB3-201ENST00000502717 AGAP4Q96P64 663 aa16.73■□□□□ 0.27
HMGXB3-201ENST00000502717 PCDHGB5Q9Y5G0 923 aa16.73■□□□□ 0.27
HMGXB3-201ENST00000502717 LRRC14BA6NHZ5 514 aa16.72■□□□□ 0.27
HMGXB3-201ENST00000502717 AGXTP21549 392 aa16.72■□□□□ 0.27
HMGXB3-201ENST00000502717 HNRNPA0Q13151 305 aaKnown RBP16.72■□□□□ 0.27
HMGXB3-201ENST00000502717 DPY19L3Q6ZPD9 716 aa16.72■□□□□ 0.27
HMGXB3-201ENST00000502717 OTOP2Q7RTS6 562 aa16.72■□□□□ 0.27
HMGXB3-201ENST00000502717 OSTM1Q86WC4 334 aa16.72■□□□□ 0.27
HMGXB3-201ENST00000502717 SMG7Q92540 1137 aaKnown RBP16.72■□□□□ 0.27
HMGXB3-201ENST00000502717 IMP4Q96G21 291 aaKnown RBP16.72■□□□□ 0.27
HMGXB3-201ENST00000502717 MTERF1Q99551 399 aaKnown RBP16.72■□□□□ 0.27
HMGXB3-201ENST00000502717 SMOQ99835 787 aa16.72■□□□□ 0.27
HMGXB3-201ENST00000502717 WACQ9BTA9 647 aa16.72■□□□□ 0.27
HMGXB3-201ENST00000502717 NMUR1Q9HB89 426 aa16.72■□□□□ 0.27
HMGXB3-201ENST00000502717 PITPNM1O00562 1244 aa16.72■□□□□ 0.27
HMGXB3-201ENST00000502717 RETP07949 1114 aa16.72■□□□□ 0.27
HMGXB3-201ENST00000502717 HPGDP15428 266 aa16.72■□□□□ 0.27
HMGXB3-201ENST00000502717 PIK3CBP42338 1070 aa16.72■□□□□ 0.27
HMGXB3-201ENST00000502717 TUBB3Q13509 450 aa16.72■□□□□ 0.27
HMGXB3-201ENST00000502717 KEAP1Q14145 624 aa16.72■□□□□ 0.27
HMGXB3-201ENST00000502717 PAGE3Q5JUK9 113 aa16.72■□□□□ 0.27
HMGXB3-201ENST00000502717 ZNF438Q7Z4V0 828 aa16.72■□□□□ 0.27
HMGXB3-201ENST00000502717 TOMM5Q8N4H5 51 aa16.72■□□□□ 0.27
HMGXB3-201ENST00000502717 CREB3L1Q96BA8 519 aa16.72■□□□□ 0.27
HMGXB3-201ENST00000502717 NSUN3Q9H649 340 aaKnown RBP16.72■□□□□ 0.27
HMGXB3-201ENST00000502717 ABCG2Q9UNQ0 655 aa16.72■□□□□ 0.27
HMGXB3-201ENST00000502717 ZFP37Q9Y6Q3 630 aaPredicted RBP16.72■□□□□ 0.27
HMGXB3-201ENST00000502717 TRBC2A0A5B9 178 aa16.72■□□□□ 0.27
HMGXB3-201ENST00000502717 SNAPC5O75971 98 aa16.72■□□□□ 0.27
HMGXB3-201ENST00000502717 EMX1Q04741 257 aaPredicted RBP16.72■□□□□ 0.27
HMGXB3-201ENST00000502717 GPR33Q49SQ1 333 aa16.72■□□□□ 0.27
HMGXB3-201ENST00000502717 CRB2Q5IJ48 1285 aa16.72■□□□□ 0.27
HMGXB3-201ENST00000502717 SETD6Q8TBK2 473 aa16.72■□□□□ 0.27
HMGXB3-201ENST00000502717 ANKRD49Q8WVL7 239 aa16.72■□□□□ 0.27
HMGXB3-201ENST00000502717 IL12RB2Q99665 862 aa16.72■□□□□ 0.27
HMGXB3-201ENST00000502717 NLE1Q9NVX2 485 aaPredicted RBP16.72■□□□□ 0.27
HMGXB3-201ENST00000502717 MLXQ9UH92 298 aa16.72■□□□□ 0.27
HMGXB3-201ENST00000502717 COL18A1P39060 1754 aa16.72■□□□□ 0.27
HMGXB3-201ENST00000502717 KPNA3O00505 521 aaPredicted RBP16.72■□□□□ 0.27
HMGXB3-201ENST00000502717 STSP08842 583 aa16.72■□□□□ 0.27
HMGXB3-201ENST00000502717 KCNE1P15382 129 aa16.72■□□□□ 0.27
HMGXB3-201ENST00000502717 RAB30Q15771 203 aa16.72■□□□□ 0.27
HMGXB3-201ENST00000502717 ZNF534Q76KX8 674 aa16.72■□□□□ 0.27
HMGXB3-201ENST00000502717 CLEC14AQ86T13 490 aa16.72■□□□□ 0.27
HMGXB3-201ENST00000502717 RAVER1Q8IY67 606 aaKnown RBP16.72■□□□□ 0.27
HMGXB3-201ENST00000502717 BPIFB1Q8TDL5 484 aa16.72■□□□□ 0.27
HMGXB3-201ENST00000502717 CCDC3Q9BQI4 270 aa16.72■□□□□ 0.27
HMGXB3-201ENST00000502717 C3orf14Q9HBI5 128 aa16.72■□□□□ 0.27
HMGXB3-201ENST00000502717 EVLQ9UI08 416 aaPredicted RBP16.72■□□□□ 0.27
HMGXB3-201ENST00000502717 MAB21L2Q9Y586 359 aa16.72■□□□□ 0.27
HMGXB3-201ENST00000502717 HAS3O00219 553 aa16.71■□□□□ 0.27
HMGXB3-201ENST00000502717 ENTPD6O75354 484 aa16.71■□□□□ 0.27
HMGXB3-201ENST00000502717 PRKCGP05129 697 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms