RNA–Protein interactions for RNA: ENST00000501400.1

LINC00535-201, long intergenic non-protein coding RNA 535, humanhuman

TSL 1 (best) BASIC

Gene LINC00535, Length 1,914 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00535-201ENST00000501400 HMGB4Q8WW32 186 aa17.55■□□□□ 0.4
LINC00535-201ENST00000501400 OR2M4Q96R27 311 aa17.55■□□□□ 0.4
LINC00535-201ENST00000501400 FERD3LQ96RJ6 166 aa17.55■□□□□ 0.4
LINC00535-201ENST00000501400 INPP5KQ9BT40 448 aa17.55■□□□□ 0.4
LINC00535-201ENST00000501400 PIF1Q9H611 641 aa17.55■□□□□ 0.4
LINC00535-201ENST00000501400 CARS2Q9HA77 564 aaKnown RBP17.55■□□□□ 0.4
LINC00535-201ENST00000501400 TSC22D4Q9Y3Q8 395 aa17.55■□□□□ 0.4
LINC00535-201ENST00000501400 TCRBV5S2A0A599 114 aa17.55■□□□□ 0.4
LINC00535-201ENST00000501400 PRMT3O60678 531 aa17.55■□□□□ 0.4
LINC00535-201ENST00000501400 KCNJ13O60928 360 aa17.55■□□□□ 0.4
LINC00535-201ENST00000501400 CAPNS1P04632 268 aa17.55■□□□□ 0.4
LINC00535-201ENST00000501400 HNRNPA2B1P22626 353 aaKnown RBP17.55■□□□□ 0.4
LINC00535-201ENST00000501400 TIA1P31483 386 aaKnown RBP eCLIP17.55■□□□□ 0.4
LINC00535-201ENST00000501400 SOX11P35716 441 aa17.55■□□□□ 0.4
LINC00535-201ENST00000501400 CDKN2CP42773 168 aa17.55■□□□□ 0.4
LINC00535-201ENST00000501400 WNT3P56703 355 aa17.55■□□□□ 0.4
LINC00535-201ENST00000501400 LAPTM5Q13571 262 aa17.55■□□□□ 0.4
LINC00535-201ENST00000501400 OR4F3Q6IEY1 312 aa17.55■□□□□ 0.4
LINC00535-201ENST00000501400 GALNT18Q6P9A2 607 aa17.55■□□□□ 0.4
LINC00535-201ENST00000501400 ANKRD46Q86W74 232 aa17.55■□□□□ 0.4
LINC00535-201ENST00000501400 PDSS2Q86YH6 399 aa17.55■□□□□ 0.4
LINC00535-201ENST00000501400 TICAM1Q8IUC6 712 aa17.55■□□□□ 0.4
LINC00535-201ENST00000501400 OR7A2PQ8NGA2 310 aa17.55■□□□□ 0.4
LINC00535-201ENST00000501400 SMPDL3AQ92484 453 aa17.55■□□□□ 0.4
LINC00535-201ENST00000501400 CAMK1GQ96NX5 476 aa17.55■□□□□ 0.4
LINC00535-201ENST00000501400 TRIM15Q9C019 465 aa17.55■□□□□ 0.4
LINC00535-201ENST00000501400 KLHL4Q9C0H6 718 aa17.55■□□□□ 0.4
LINC00535-201ENST00000501400 KCNH6Q9H252 994 aa17.55■□□□□ 0.4
LINC00535-201ENST00000501400 WASH6PQ9NQA3 447 aa17.55■□□□□ 0.4
LINC00535-201ENST00000501400 PRDM8Q9NQV8 689 aa17.55■□□□□ 0.4
LINC00535-201ENST00000501400 SCHIP1Q9P0W5 487 aaPredicted RBP17.55■□□□□ 0.4
LINC00535-201ENST00000501400 A0A096LPI6 279 aa17.54■□□□□ 0.4
LINC00535-201ENST00000501400 PRAMEF33A0A0G2JMD5 474 aa17.54■□□□□ 0.4
LINC00535-201ENST00000501400 FPGTO14772 594 aa17.54■□□□□ 0.4
LINC00535-201ENST00000501400 SCN2BO60939 215 aa17.54■□□□□ 0.4
LINC00535-201ENST00000501400 STAMBPO95630 424 aa17.54■□□□□ 0.4
LINC00535-201ENST00000501400 TBX6O95947 436 aaPredicted RBP17.54■□□□□ 0.4
LINC00535-201ENST00000501400 IDSP22304 550 aa17.54■□□□□ 0.4
LINC00535-201ENST00000501400 OXTRP30559 389 aa17.54■□□□□ 0.4
LINC00535-201ENST00000501400 AQP4P55087 323 aa17.54■□□□□ 0.4
LINC00535-201ENST00000501400 CTBSQ01459 385 aa17.54■□□□□ 0.4
LINC00535-201ENST00000501400 SFSWAPQ12872 951 aaKnown RBP17.54■□□□□ 0.4
LINC00535-201ENST00000501400 PGS1Q32NB8 556 aa17.54■□□□□ 0.4
LINC00535-201ENST00000501400 UAP1L1Q3KQV9 507 aa17.54■□□□□ 0.4
LINC00535-201ENST00000501400 RUNDC3AQ59EK9 446 aa17.54■□□□□ 0.4
LINC00535-201ENST00000501400 IRAK1BP1Q5VVH5 260 aa17.54■□□□□ 0.4
LINC00535-201ENST00000501400 MSANTD1Q6ZTZ1 278 aa17.54■□□□□ 0.4
LINC00535-201ENST00000501400 C17orf64Q86WR6 236 aa17.54■□□□□ 0.4
LINC00535-201ENST00000501400 TMEM126BQ8IUX1 230 aa17.54■□□□□ 0.4
LINC00535-201ENST00000501400 ZNF583Q96ND8 569 aa17.54■□□□□ 0.4
LINC00535-201ENST00000501400 CPPED1Q9BRF8 314 aaPredicted RBP17.54■□□□□ 0.4
LINC00535-201ENST00000501400 REXO4Q9GZR2 422 aaKnown RBP17.54■□□□□ 0.4
LINC00535-201ENST00000501400 OR51B5Q9H339 312 aa17.54■□□□□ 0.4
LINC00535-201ENST00000501400 SIRT5Q9NXA8 310 aa17.54■□□□□ 0.4
LINC00535-201ENST00000501400 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17.54■□□□□ 0.4
LINC00535-201ENST00000501400 PCDHB14Q9Y5E9 798 aa17.54■□□□□ 0.4
LINC00535-201ENST00000501400 SNRNP200O75643 2136 aaKnown RBP17.53■□□□□ 0.4
LINC00535-201ENST00000501400 LRRC72A6NJI9 287 aa17.53■□□□□ 0.4
LINC00535-201ENST00000501400 PDZK1P1A8MUH7 402 aa17.53■□□□□ 0.4
LINC00535-201ENST00000501400 PEX1O43933 1283 aa17.53■□□□□ 0.4
LINC00535-201ENST00000501400 ERN1O75460 977 aaKnown RBP17.53■□□□□ 0.4
LINC00535-201ENST00000501400 TGFB1P01137 390 aa17.53■□□□□ 0.4
LINC00535-201ENST00000501400 PKLRP30613 574 aa17.53■□□□□ 0.4
LINC00535-201ENST00000501400 PIK3CBP42338 1070 aa17.53■□□□□ 0.4
LINC00535-201ENST00000501400 KIR3DL1P43629 444 aa17.53■□□□□ 0.4
LINC00535-201ENST00000501400 CYP4F3Q08477 520 aa17.53■□□□□ 0.4
LINC00535-201ENST00000501400 SMAD2Q15796 467 aaKnown RBP17.53■□□□□ 0.4
LINC00535-201ENST00000501400 HIST2H2ACQ16777 129 aaPredicted RBP17.53■□□□□ 0.4
LINC00535-201ENST00000501400 DPY19L1Q2PZI1 675 aa17.53■□□□□ 0.4
LINC00535-201ENST00000501400 HIST2H2AA3Q6FI13 130 aa17.53■□□□□ 0.4
LINC00535-201ENST00000501400 TMIGD1Q6UXZ0 262 aa17.53■□□□□ 0.4
LINC00535-201ENST00000501400 COMMD6Q7Z4G1 85 aa17.53■□□□□ 0.4
LINC00535-201ENST00000501400 GPR180Q86V85 440 aa17.53■□□□□ 0.4
LINC00535-201ENST00000501400 ADGRG5Q8IZF4 528 aa17.53■□□□□ 0.4
LINC00535-201ENST00000501400 ZNF687Q8N1G0 1237 aa17.53■□□□□ 0.4
LINC00535-201ENST00000501400 ABHD11Q8NFV4 315 aa17.53■□□□□ 0.4
LINC00535-201ENST00000501400 CDC26Q8NHZ8 85 aa17.53■□□□□ 0.4
LINC00535-201ENST00000501400 AURKBQ96GD4 344 aaPredicted RBP17.53■□□□□ 0.4
LINC00535-201ENST00000501400 XKR8Q9H6D3 395 aa17.53■□□□□ 0.4
LINC00535-201ENST00000501400 RPF2Q9H7B2 306 aaKnown RBP17.53■□□□□ 0.4
LINC00535-201ENST00000501400 PELI2Q9HAT8 420 aa17.53■□□□□ 0.4
LINC00535-201ENST00000501400 C2orf42Q9NWW7 574 aa17.53■□□□□ 0.4
LINC00535-201ENST00000501400 BTBD3Q9Y2F9 522 aa17.53■□□□□ 0.4
LINC00535-201ENST00000501400 LRCH1Q9Y2L9 728 aa17.53■□□□□ 0.4
LINC00535-201ENST00000501400 PCDHB3Q9Y5E6 796 aa17.53■□□□□ 0.4
LINC00535-201ENST00000501400 DHRS12A0PJE2 317 aa17.53■□□□□ 0.4
LINC00535-201ENST00000501400 SAP18O00422 153 aaKnown RBP17.53■□□□□ 0.4
LINC00535-201ENST00000501400 SCAMP2O15127 329 aaKnown RBP17.53■□□□□ 0.4
LINC00535-201ENST00000501400 PCDH7O60245 1069 aa17.53■□□□□ 0.4
LINC00535-201ENST00000501400 MYO1DO94832 1006 aa17.53■□□□□ 0.4
LINC00535-201ENST00000501400 KLHL18O94889 574 aa17.53■□□□□ 0.4
LINC00535-201ENST00000501400 EML2O95834 649 aa17.53■□□□□ 0.4
LINC00535-201ENST00000501400 ANXA4P09525 319 aaPredicted RBP17.53■□□□□ 0.4
LINC00535-201ENST00000501400 RAB28P51157 221 aa17.53■□□□□ 0.4
LINC00535-201ENST00000501400 TDGQ13569 410 aa17.53■□□□□ 0.4
LINC00535-201ENST00000501400 RPE65Q16518 533 aa17.53■□□□□ 0.4
LINC00535-201ENST00000501400 HKDC1Q2TB90 917 aa17.53■□□□□ 0.4
LINC00535-201ENST00000501400 GRAMD1BQ3KR37 738 aa17.53■□□□□ 0.4
LINC00535-201ENST00000501400 ANKRD26P1Q6NSI1 321 aa17.53■□□□□ 0.4
LINC00535-201ENST00000501400 HMBOX1Q6NT76 420 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms