RNA–Protein interactions for RNA: ENST00000498708.1

SPTA1-209, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 600 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-209ENST00000498708 ISM1B1AKI9 464 aa5.29□□□□□ -1.56
SPTA1-209ENST00000498708 IFRD1O00458 451 aaPredicted RBP5.29□□□□□ -1.56
SPTA1-209ENST00000498708 ZNHIT1O43257 154 aa5.29□□□□□ -1.56
SPTA1-209ENST00000498708 CNOT3O75175 753 aaKnown RBP5.29□□□□□ -1.56
SPTA1-209ENST00000498708 COQ9O75208 318 aa5.29□□□□□ -1.56
SPTA1-209ENST00000498708 OR2B3O76000 313 aa5.29□□□□□ -1.56
SPTA1-209ENST00000498708 SLCO2B1O94956 709 aa5.29□□□□□ -1.56
SPTA1-209ENST00000498708 RALBP11234 206 aa5.29□□□□□ -1.56
SPTA1-209ENST00000498708 ATP1B2P14415 290 aaPredicted RBP5.29□□□□□ -1.56
SPTA1-209ENST00000498708 UGT2B7P16662 529 aa5.29□□□□□ -1.56
SPTA1-209ENST00000498708 TPH1P17752 444 aa5.29□□□□□ -1.56
SPTA1-209ENST00000498708 ITGALP20701 1170 aa5.29□□□□□ -1.56
SPTA1-209ENST00000498708 PSMB4P28070 264 aa5.29□□□□□ -1.56
SPTA1-209ENST00000498708 MC4RP32245 332 aa5.29□□□□□ -1.56
SPTA1-209ENST00000498708 CDKN2BP42772 138 aa5.29□□□□□ -1.56
SPTA1-209ENST00000498708 MARCKSL1P49006 195 aa5.29□□□□□ -1.56
SPTA1-209ENST00000498708 GEMP55040 296 aa5.29□□□□□ -1.56
SPTA1-209ENST00000498708 XIAPP98170 497 aa5.29□□□□□ -1.56
SPTA1-209ENST00000498708 MPP3Q13368 585 aa5.29□□□□□ -1.56
SPTA1-209ENST00000498708 TAF1AQ15573 450 aaPredicted RBP5.29□□□□□ -1.56
SPTA1-209ENST00000498708 SLC14A2Q15849 920 aa5.29□□□□□ -1.56
SPTA1-209ENST00000498708 CYP2A13Q16696 494 aa5.29□□□□□ -1.56
SPTA1-209ENST00000498708 BCL7AQ4VC05 210 aa5.29□□□□□ -1.56
SPTA1-209ENST00000498708 RPUSD3Q6P087 351 aaKnown RBP5.29□□□□□ -1.56
SPTA1-209ENST00000498708 SHISA6Q6ZSJ9 500 aa5.29□□□□□ -1.56
SPTA1-209ENST00000498708 BZW1Q7L1Q6 419 aaKnown RBP5.29□□□□□ -1.56
SPTA1-209ENST00000498708 TAX1BP1Q86VP1 789 aa5.29□□□□□ -1.56
SPTA1-209ENST00000498708 AMIGO1Q86WK6 493 aa5.29□□□□□ -1.56
SPTA1-209ENST00000498708 ADGRF3Q8IZF5 1079 aa5.29□□□□□ -1.56
SPTA1-209ENST00000498708 CIARTQ8N365 385 aaPredicted RBP5.29□□□□□ -1.56
SPTA1-209ENST00000498708 CLDN19Q8N6F1 224 aa5.29□□□□□ -1.56
SPTA1-209ENST00000498708 METTL27Q8N6F8 245 aaPredicted RBP5.29□□□□□ -1.56
SPTA1-209ENST00000498708 ZNF655Q8N720 491 aaPredicted RBP5.29□□□□□ -1.56
SPTA1-209ENST00000498708 DNAAF3Q8N9W5 541 aa5.29□□□□□ -1.56
SPTA1-209ENST00000498708 MNS1Q8NEH6 495 aa5.29□□□□□ -1.56
SPTA1-209ENST00000498708 OR5AR1Q8NGP9 310 aa5.29□□□□□ -1.56
SPTA1-209ENST00000498708 OR1N1Q8NGS0 311 aa5.29□□□□□ -1.56
SPTA1-209ENST00000498708 HM13Q8TCT9 377 aa5.29□□□□□ -1.56
SPTA1-209ENST00000498708 GATAD2BQ8WXI9 593 aa5.29□□□□□ -1.56
SPTA1-209ENST00000498708 TFGQ92734 400 aaPredicted RBP5.29□□□□□ -1.56
SPTA1-209ENST00000498708 FER1L6-AS2Q96M78 137 aa5.29□□□□□ -1.56
SPTA1-209ENST00000498708 CCDC42Q96M95 316 aa5.29□□□□□ -1.56
SPTA1-209ENST00000498708 LRFN5Q96NI6 719 aa5.29□□□□□ -1.56
SPTA1-209ENST00000498708 GBP5Q96PP8 586 aa5.29□□□□□ -1.56
SPTA1-209ENST00000498708 COPS8Q99627 209 aa5.29□□□□□ -1.56
SPTA1-209ENST00000498708 GORASP1Q9BQQ3 440 aa5.29□□□□□ -1.56
SPTA1-209ENST00000498708 ZNF559Q9BR84 538 aa5.29□□□□□ -1.56
SPTA1-209ENST00000498708 CCM2Q9BSQ5 444 aa5.29□□□□□ -1.56
SPTA1-209ENST00000498708 TXLNGQ9NUQ3 528 aa5.29□□□□□ -1.56
SPTA1-209ENST00000498708 ZNHIT6Q9NWK9 470 aaKnown RBP5.29□□□□□ -1.56
SPTA1-209ENST00000498708 PIH1D1Q9NWS0 290 aaKnown RBP5.29□□□□□ -1.56
SPTA1-209ENST00000498708 P4HTMQ9NXG6 502 aa5.29□□□□□ -1.56
SPTA1-209ENST00000498708 SPHK1Q9NYA1 384 aa5.29□□□□□ -1.56
SPTA1-209ENST00000498708 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.29□□□□□ -1.56
SPTA1-209ENST00000498708 SEC14L3Q9UDX4 400 aa5.29□□□□□ -1.56
SPTA1-209ENST00000498708 LCMT1Q9UIC8 334 aa5.29□□□□□ -1.56
SPTA1-209ENST00000498708 ICKQ9UPZ9 632 aa5.29□□□□□ -1.56
SPTA1-209ENST00000498708 PADI2Q9Y2J8 665 aa5.29□□□□□ -1.56
SPTA1-209ENST00000498708 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP5.29□□□□□ -1.562e-11■■□□□ 11.5
SPTA1-209ENST00000498708 CORINQ9Y5Q5 1042 aa5.29□□□□□ -1.56
SPTA1-209ENST00000498708 HEBP2Q9Y5Z4 205 aa5.29□□□□□ -1.56
SPTA1-209ENST00000498708 PRSS21Q9Y6M0 314 aa5.29□□□□□ -1.56
SPTA1-209ENST00000498708 SONP18583 2426 aaKnown RBP5.29□□□□□ -1.56
SPTA1-209ENST00000498708 CHD3Q12873 2000 aaKnown RBP5.29□□□□□ -1.56
SPTA1-209ENST00000498708 hCG_1818297A0A087WSY0 165 aa5.28□□□□□ -1.56
SPTA1-209ENST00000498708 OR51F1A6NGY5 319 aa5.28□□□□□ -1.56
SPTA1-209ENST00000498708 ZNF487B1APH4 448 aa5.28□□□□□ -1.56
SPTA1-209ENST00000498708 MATN2O00339 956 aa5.28□□□□□ -1.56
SPTA1-209ENST00000498708 KLHL41O60662 606 aa5.28□□□□□ -1.56
SPTA1-209ENST00000498708 SLC19A2O60779 497 aa5.28□□□□□ -1.56
SPTA1-209ENST00000498708 KLF7O75840 302 aaPredicted RBP5.28□□□□□ -1.56
SPTA1-209ENST00000498708 SIX3O95343 332 aaPredicted RBP5.28□□□□□ -1.56
SPTA1-209ENST00000498708 EPOP01588 193 aa5.28□□□□□ -1.56
SPTA1-209ENST00000498708 UMODP07911 640 aa5.28□□□□□ -1.56
SPTA1-209ENST00000498708 HBQ1P09105 142 aa5.28□□□□□ -1.56
SPTA1-209ENST00000498708 DNASE1P24855 282 aa5.28□□□□□ -1.56
SPTA1-209ENST00000498708 HOXC12P31275 282 aa5.28□□□□□ -1.56
SPTA1-209ENST00000498708 TRHRP34981 398 aaPredicted RBP5.28□□□□□ -1.56
SPTA1-209ENST00000498708 ARHGAP25P42331 645 aa5.28□□□□□ -1.56
SPTA1-209ENST00000498708 NR2C2P49116 596 aa5.28□□□□□ -1.56
SPTA1-209ENST00000498708 PRLHRP49683 370 aa5.28□□□□□ -1.56
SPTA1-209ENST00000498708 LINC00310P59036 64 aa5.28□□□□□ -1.56
SPTA1-209ENST00000498708 DCDP81605 110 aaKnown RBP5.28□□□□□ -1.56
SPTA1-209ENST00000498708 PWP1Q13610 501 aa5.28□□□□□ -1.56
SPTA1-209ENST00000498708 BOP1Q14137 746 aaKnown RBP5.28□□□□□ -1.56
SPTA1-209ENST00000498708 PRPSAP1Q14558 356 aa5.28□□□□□ -1.56
SPTA1-209ENST00000498708 SSPNQ14714 243 aa5.28□□□□□ -1.56
SPTA1-209ENST00000498708 PCOLCEQ15113 449 aa5.28□□□□□ -1.56
SPTA1-209ENST00000498708 ZIC1Q15915 447 aa5.28□□□□□ -1.56
SPTA1-209ENST00000498708 ASTE1Q2TB18 679 aaPredicted RBP5.28□□□□□ -1.56
SPTA1-209ENST00000498708 ANKRD20A2Q5SQ80 823 aa5.28□□□□□ -1.56
SPTA1-209ENST00000498708 ANKRD20A1Q5TYW2 823 aa5.28□□□□□ -1.56
SPTA1-209ENST00000498708 LRRC38Q5VT99 294 aa5.28□□□□□ -1.56
SPTA1-209ENST00000498708 ANKRD20A3Q5VUR7 823 aa5.28□□□□□ -1.56
SPTA1-209ENST00000498708 ZNF449Q6P9G9 518 aa5.28□□□□□ -1.56
SPTA1-209ENST00000498708 SARM1Q6SZW1 724 aa5.28□□□□□ -1.56
SPTA1-209ENST00000498708 SPESP1Q6UW49 350 aa5.28□□□□□ -1.56
SPTA1-209ENST00000498708 UNC5AQ6ZN44 842 aa5.28□□□□□ -1.56
SPTA1-209ENST00000498708 LINC00696Q6ZRV3 163 aa5.28□□□□□ -1.56
SPTA1-209ENST00000498708 TTLL10Q6ZVT0 673 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms