RNA–Protein interactions for RNA: ENST00000498438.1

HOXD11-202, Transcript of homeobox D11, humanhuman

TSL 1 (best)

Gene HOXD11, Length 1,259 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD11-202ENST00000498438 CEP97Q8IW35 865 aa17.51■□□□□ 0.39
HOXD11-202ENST00000498438 ARHGEF39Q8N4T4 335 aa17.51■□□□□ 0.39
HOXD11-202ENST00000498438 NKAPQ8N5F7 415 aaKnown RBP17.51■□□□□ 0.39
HOXD11-202ENST00000498438 CDKL2Q92772 493 aa17.51■□□□□ 0.39
HOXD11-202ENST00000498438 PYCR2Q96C36 320 aa17.51■□□□□ 0.39
HOXD11-202ENST00000498438 FBXL8Q96CD0 374 aa17.51■□□□□ 0.39
HOXD11-202ENST00000498438 MVB12AQ96EY5 273 aa17.51■□□□□ 0.39
HOXD11-202ENST00000498438 PHACTR1Q9C0D0 580 aa17.51■□□□□ 0.39
HOXD11-202ENST00000498438 GPR83Q9NYM4 423 aa17.51■□□□□ 0.39
HOXD11-202ENST00000498438 ZNF282Q9UDV7 671 aaPredicted RBP17.51■□□□□ 0.39
HOXD11-202ENST00000498438 CDC14AQ9UNH5 594 aa17.51■□□□□ 0.39
HOXD11-202ENST00000498438 NOVA2Q9UNW9 492 aaKnown RBP17.51■□□□□ 0.39
HOXD11-202ENST00000498438 FEZF1A0PJY2 475 aa17.5■□□□□ 0.39
HOXD11-202ENST00000498438 AGPSO00116 658 aa17.5■□□□□ 0.39
HOXD11-202ENST00000498438 CDC7O00311 574 aa17.5■□□□□ 0.39
HOXD11-202ENST00000498438 SOCS6O14544 535 aa17.5■□□□□ 0.39
HOXD11-202ENST00000498438 ZIC2O95409 532 aaPredicted RBP17.5■□□□□ 0.39
HOXD11-202ENST00000498438 GPX6P59796 221 aa17.5■□□□□ 0.39
HOXD11-202ENST00000498438 OCA2Q04671 838 aa17.5■□□□□ 0.39
HOXD11-202ENST00000498438 KLC1Q07866 573 aa17.5■□□□□ 0.39
HOXD11-202ENST00000498438 DSG2Q14126 1118 aa17.5■□□□□ 0.39
HOXD11-202ENST00000498438 PRSS58Q8IYP2 241 aa17.5■□□□□ 0.39
HOXD11-202ENST00000498438 OR56A3Q8NH54 315 aa17.5■□□□□ 0.39
HOXD11-202ENST00000498438 STT3BQ8TCJ2 826 aa17.5■□□□□ 0.39
HOXD11-202ENST00000498438 ATL1Q8WXF7 558 aa17.5■□□□□ 0.39
HOXD11-202ENST00000498438 NACC2Q96BF6 587 aa17.5■□□□□ 0.39
HOXD11-202ENST00000498438 MIEF2Q96C03 454 aa17.5■□□□□ 0.39
HOXD11-202ENST00000498438 HAUS8Q9BT25 410 aa17.5■□□□□ 0.39
HOXD11-202ENST00000498438 CRB3Q9BUF7 120 aa17.5■□□□□ 0.39
HOXD11-202ENST00000498438 DRC3Q9H069 523 aa17.5■□□□□ 0.39
HOXD11-202ENST00000498438 GPAMQ9HCL2 828 aa17.5■□□□□ 0.39
HOXD11-202ENST00000498438 FBXL4Q9UKA2 621 aa17.5■□□□□ 0.39
HOXD11-202ENST00000498438 MTO1Q9Y2Z2 717 aaKnown RBP17.5■□□□□ 0.39
HOXD11-202ENST00000498438 ZNF451Q9Y4E5 1061 aa17.5■□□□□ 0.39
HOXD11-202ENST00000498438 PCDHGB7Q9Y5F8 929 aa17.5■□□□□ 0.39
HOXD11-202ENST00000498438 HS3ST3B1Q9Y662 390 aa17.5■□□□□ 0.39
HOXD11-202ENST00000498438 UBR5O95071 2799 aaPredicted RBP17.49■□□□□ 0.39
HOXD11-202ENST00000498438 IGLV3-12A0A075B6K2 115 aa17.49■□□□□ 0.39
HOXD11-202ENST00000498438 KCNE1BA0A087WTH5 132 aa17.49■□□□□ 0.39
HOXD11-202ENST00000498438 ESYT3A0FGR9 886 aa17.49■□□□□ 0.39
HOXD11-202ENST00000498438 FAM159BA6NKW6 160 aa17.49■□□□□ 0.39
HOXD11-202ENST00000498438 FFAR3O14843 346 aa17.49■□□□□ 0.39
HOXD11-202ENST00000498438 GPR42O15529 346 aa17.49■□□□□ 0.39
HOXD11-202ENST00000498438 PRPF4O43172 522 aaKnown RBP eCLIP17.49■□□□□ 0.39
HOXD11-202ENST00000498438 FOXS1O43638 330 aa17.49■□□□□ 0.39
HOXD11-202ENST00000498438 URI1O94763 535 aaPredicted RBP17.49■□□□□ 0.39
HOXD11-202ENST00000498438 GSTA2P09210 222 aa17.49■□□□□ 0.39
HOXD11-202ENST00000498438 ZGLP1P0C6A0 271 aa17.49■□□□□ 0.39
HOXD11-202ENST00000498438 NPPBP16860 134 aa17.49■□□□□ 0.39
HOXD11-202ENST00000498438 BCL6P41182 706 aa17.49■□□□□ 0.39
HOXD11-202ENST00000498438 CSRP3P50461 194 aa17.49■□□□□ 0.39
HOXD11-202ENST00000498438 SNRPNP63162 240 aaKnown RBP17.49■□□□□ 0.39
HOXD11-202ENST00000498438 SLC7A5Q01650 507 aa17.49■□□□□ 0.39
HOXD11-202ENST00000498438 ILF2Q12905 390 aaKnown RBP17.49■□□□□ 0.39
HOXD11-202ENST00000498438 RBBP7Q16576 425 aa17.49■□□□□ 0.39
HOXD11-202ENST00000498438 VWA2Q5GFL6 755 aa17.49■□□□□ 0.39
HOXD11-202ENST00000498438 C8orf74Q6P047 294 aa17.49■□□□□ 0.39
HOXD11-202ENST00000498438 C3orf62Q6ZUJ4 267 aa17.49■□□□□ 0.39
HOXD11-202ENST00000498438 GALNT16Q8N428 558 aa17.49■□□□□ 0.39
HOXD11-202ENST00000498438 AMER3Q8N944 861 aa17.49■□□□□ 0.39
HOXD11-202ENST00000498438 ANKRD49Q8WVL7 239 aa17.49■□□□□ 0.39
HOXD11-202ENST00000498438 MMABQ96EY8 250 aaPredicted RBP17.49■□□□□ 0.39
HOXD11-202ENST00000498438 OR4K3Q96R72 315 aa17.49■□□□□ 0.39
HOXD11-202ENST00000498438 SMAD5Q99717 465 aaKnown RBP17.49■□□□□ 0.39
HOXD11-202ENST00000498438 CPNE1Q99829 537 aa17.49■□□□□ 0.39
HOXD11-202ENST00000498438 CAB39LQ9H9S4 337 aa17.49■□□□□ 0.39
HOXD11-202ENST00000498438 POPDC3Q9HBV1 291 aa17.49■□□□□ 0.39
HOXD11-202ENST00000498438 SEMA3GQ9NS98 782 aa17.49■□□□□ 0.39
HOXD11-202ENST00000498438 TXNDC16Q9P2K2 825 aa17.49■□□□□ 0.39
HOXD11-202ENST00000498438 TRPC4Q9UBN4 977 aa17.49■□□□□ 0.39
HOXD11-202ENST00000498438 MRPS2Q9Y399 296 aaKnown RBP17.49■□□□□ 0.39
HOXD11-202ENST00000498438 DOCK10Q96BY6 2186 aa17.49■□□□□ 0.39
HOXD11-202ENST00000498438 A0A0A6YYC8 382 aaPredicted RBP17.48■□□□□ 0.39
HOXD11-202ENST00000498438 I3L1I5 382 aaPredicted RBP17.48■□□□□ 0.39
HOXD11-202ENST00000498438 ALOX12BO75342 701 aa17.48■□□□□ 0.39
HOXD11-202ENST00000498438 C1QAP02745 245 aa17.48■□□□□ 0.39
HOXD11-202ENST00000498438 ANXA5P08758 320 aa17.48■□□□□ 0.39
HOXD11-202ENST00000498438 SLC26A3P40879 764 aa17.48■□□□□ 0.39
HOXD11-202ENST00000498438 MAGEA4P43358 317 aa17.48■□□□□ 0.39
HOXD11-202ENST00000498438 SLC12A2P55011 1212 aa17.48■□□□□ 0.39
HOXD11-202ENST00000498438 POU4F1Q01851 419 aa17.48■□□□□ 0.39
HOXD11-202ENST00000498438 KCNC4Q03721 635 aa17.48■□□□□ 0.39
HOXD11-202ENST00000498438 TSNQ15631 228 aaKnown RBP17.48■□□□□ 0.39
HOXD11-202ENST00000498438 NDUFA9Q16795 377 aa17.48■□□□□ 0.39
HOXD11-202ENST00000498438 WHAMMP3Q1A5X7 153 aa17.48■□□□□ 0.39
HOXD11-202ENST00000498438 NADK2Q4G0N4 442 aa17.48■□□□□ 0.39
HOXD11-202ENST00000498438 VWA5B1Q5TIE3 1220 aa17.48■□□□□ 0.39
HOXD11-202ENST00000498438 KIRREL2Q6UWL6 708 aa17.48■□□□□ 0.39
HOXD11-202ENST00000498438 CYS1Q717R9 158 aa17.48■□□□□ 0.39
HOXD11-202ENST00000498438 ANKRD7Q92527 254 aa17.48■□□□□ 0.39
HOXD11-202ENST00000498438 THAP11Q96EK4 314 aa17.48■□□□□ 0.39
HOXD11-202ENST00000498438 RBBP8Q99708 897 aa17.48■□□□□ 0.39
HOXD11-202ENST00000498438 MACROD1Q9BQ69 325 aa17.48■□□□□ 0.39
HOXD11-202ENST00000498438 MESP1Q9BRJ9 268 aa17.48■□□□□ 0.39
HOXD11-202ENST00000498438 LRRC1Q9BTT6 524 aa17.48■□□□□ 0.39
HOXD11-202ENST00000498438 YIPF2Q9BWQ6 316 aa17.48■□□□□ 0.39
HOXD11-202ENST00000498438 UNKQ9C0B0 810 aaKnown RBP17.48■□□□□ 0.39
HOXD11-202ENST00000498438 CLMPQ9H6B4 373 aa17.48■□□□□ 0.39
HOXD11-202ENST00000498438 C3orf18Q9UK00 162 aa17.48■□□□□ 0.39
HOXD11-202ENST00000498438 MAP4K5Q9Y4K4 846 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms