RNA–Protein interactions for RNA: ENST00000497580.5

GAPVD1-220, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 3,720 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-220ENST00000497580 DENND1CQ8IV53 801 aa12.67□□□□□ -0.38
GAPVD1-220ENST00000497580 DPCDQ9BVM2 203 aaPredicted RBP12.67□□□□□ -0.38
GAPVD1-220ENST00000497580 RETREG1Q9H6L5 497 aa12.67□□□□□ -0.38
GAPVD1-220ENST00000497580 IPPKQ9H8X2 491 aa12.67□□□□□ -0.38
GAPVD1-220ENST00000497580 HEBP1Q9NRV9 189 aa12.67□□□□□ -0.38
GAPVD1-220ENST00000497580 COL2A1P02458 1487 aaPredicted RBP12.67□□□□□ -0.38
GAPVD1-220ENST00000497580 TEX51A0A1B0GUA7 166 aa12.67□□□□□ -0.38
GAPVD1-220ENST00000497580 LZTS3O60299 673 aaPredicted RBP12.67□□□□□ -0.38
GAPVD1-220ENST00000497580 PAGE1O75459 146 aa12.67□□□□□ -0.38
GAPVD1-220ENST00000497580 MTRF1O75570 445 aaKnown RBP12.67□□□□□ -0.38
GAPVD1-220ENST00000497580 SDHBP21912 280 aa12.67□□□□□ -0.38
GAPVD1-220ENST00000497580 APEX1P27695 318 aaKnown RBP12.67□□□□□ -0.38
GAPVD1-220ENST00000497580 MAP2K3P46734 347 aa12.67□□□□□ -0.38
GAPVD1-220ENST00000497580 PRIM2P49643 509 aa12.67□□□□□ -0.38
GAPVD1-220ENST00000497580 ZXDBP98169 803 aa12.67□□□□□ -0.38
GAPVD1-220ENST00000497580 KDELC1Q6UW63 502 aa12.67□□□□□ -0.38
GAPVD1-220ENST00000497580 PAQR9Q6ZVX9 377 aa12.67□□□□□ -0.38
GAPVD1-220ENST00000497580 ANKS3Q6ZW76 656 aa12.67□□□□□ -0.38
GAPVD1-220ENST00000497580 CREB3L2Q70SY1 520 aa12.67□□□□□ -0.38
GAPVD1-220ENST00000497580 POF1BQ8WVV4 589 aa12.67□□□□□ -0.38
GAPVD1-220ENST00000497580 ULK4Q96C45 1275 aa12.67□□□□□ -0.38
GAPVD1-220ENST00000497580 B3GALT6Q96L58 329 aa12.67□□□□□ -0.38
GAPVD1-220ENST00000497580 ERVW-1Q9UQF0 538 aa12.67□□□□□ -0.38
GAPVD1-220ENST00000497580 AP3M1Q9Y2T2 418 aa12.67□□□□□ -0.38
GAPVD1-220ENST00000497580 RFXANKO14593 260 aa12.66□□□□□ -0.38
GAPVD1-220ENST00000497580 NBNO60934 754 aa12.66□□□□□ -0.38
GAPVD1-220ENST00000497580 AOC2O75106 756 aa12.66□□□□□ -0.38
GAPVD1-220ENST00000497580 SLC22A5O76082 557 aa12.66□□□□□ -0.38
GAPVD1-220ENST00000497580 C22orf31O95567 290 aa12.66□□□□□ -0.38
GAPVD1-220ENST00000497580 C1QBP02746 253 aa12.66□□□□□ -0.38
GAPVD1-220ENST00000497580 SCAPQ12770 1279 aa12.66□□□□□ -0.38
GAPVD1-220ENST00000497580 USP39Q53GS9 565 aaKnown RBP12.66□□□□□ -0.38
GAPVD1-220ENST00000497580 LAMTOR1Q6IAA8 161 aa12.66□□□□□ -0.38
GAPVD1-220ENST00000497580 ARSKQ6UWY0 536 aa12.66□□□□□ -0.38
GAPVD1-220ENST00000497580 GPR65Q8IYL9 337 aa12.66□□□□□ -0.38
GAPVD1-220ENST00000497580 RLIMQ9NVW2 624 aa12.66□□□□□ -0.38
GAPVD1-220ENST00000497580 MYBPHLA2RUH7 354 aa12.66□□□□□ -0.38
GAPVD1-220ENST00000497580 CSTF2P33240 577 aaKnown RBP eCLIP12.66□□□□□ -0.38
GAPVD1-220ENST00000497580 MGAT3Q09327 533 aa12.66□□□□□ -0.38
GAPVD1-220ENST00000497580 LCN1P1Q5VSP4 162 aa12.66□□□□□ -0.38
GAPVD1-220ENST00000497580 GARNL3Q5VVW2 1013 aa12.66□□□□□ -0.38
GAPVD1-220ENST00000497580 LRRC66Q68CR7 880 aa12.66□□□□□ -0.38
GAPVD1-220ENST00000497580 TYW3Q6IPR3 259 aaKnown RBP12.66□□□□□ -0.38
GAPVD1-220ENST00000497580 MSANTD2Q6P1R3 559 aa12.66□□□□□ -0.38
GAPVD1-220ENST00000497580 TMEM65Q6PI78 240 aa12.66□□□□□ -0.38
GAPVD1-220ENST00000497580 ZNF431Q8TF32 576 aaPredicted RBP12.66□□□□□ -0.38
GAPVD1-220ENST00000497580 SENP8Q96LD8 212 aa12.66□□□□□ -0.38
GAPVD1-220ENST00000497580 SLC25A51Q9H1U9 297 aa12.66□□□□□ -0.38
GAPVD1-220ENST00000497580 MCCC2Q9HCC0 563 aa12.66□□□□□ -0.38
GAPVD1-220ENST00000497580 TMEM30AQ9NV96 361 aa12.66□□□□□ -0.38
GAPVD1-220ENST00000497580 ERAP1Q9NZ08 941 aa12.66□□□□□ -0.38
GAPVD1-220ENST00000497580 GPRC5BQ9NZH0 403 aa12.66□□□□□ -0.38
GAPVD1-220ENST00000497580 TNS1Q9HBL0 1735 aaKnown RBP12.66□□□□□ -0.38
GAPVD1-220ENST00000497580 ADM5C9JUS6 153 aa12.66□□□□□ -0.38
GAPVD1-220ENST00000497580 E2F3O00716 465 aa12.66□□□□□ -0.38
GAPVD1-220ENST00000497580 FABP7O15540 132 aa12.66□□□□□ -0.38
GAPVD1-220ENST00000497580 STAU1O95793 577 aaKnown RBP12.66□□□□□ -0.38
GAPVD1-220ENST00000497580 F9P00740 461 aa12.66□□□□□ -0.38
GAPVD1-220ENST00000497580 ALAS2P22557 587 aa12.66□□□□□ -0.38
GAPVD1-220ENST00000497580 SMSP52788 366 aa12.66□□□□□ -0.38
GAPVD1-220ENST00000497580 RPA4Q13156 261 aa12.66□□□□□ -0.38
GAPVD1-220ENST00000497580 SNAPC1Q16533 368 aa12.66□□□□□ -0.38
GAPVD1-220ENST00000497580 FKBP1CQ5VVH2 108 aa12.66□□□□□ -0.38
GAPVD1-220ENST00000497580 SUSD1Q6UWL2 747 aa12.66□□□□□ -0.38
GAPVD1-220ENST00000497580 CHMP1BQ7LBR1 199 aa12.66□□□□□ -0.38
GAPVD1-220ENST00000497580 GOLGA7Q7Z5G4 137 aa12.66□□□□□ -0.38
GAPVD1-220ENST00000497580 SLC5A8Q8N695 610 aa12.66□□□□□ -0.38
GAPVD1-220ENST00000497580 LRRC52Q8N7C0 313 aa12.66□□□□□ -0.38
GAPVD1-220ENST00000497580 RNF39Q9H2S5 420 aa12.66□□□□□ -0.38
GAPVD1-220ENST00000497580 CATSPERBQ9H7T0 1116 aa12.66□□□□□ -0.38
GAPVD1-220ENST00000497580 BPIFA1Q9NP55 256 aa12.66□□□□□ -0.38
GAPVD1-220ENST00000497580 ASAH2Q9NR71 780 aa12.66□□□□□ -0.38
GAPVD1-220ENST00000497580 B3GNT2Q9NY97 397 aa12.66□□□□□ -0.38
GAPVD1-220ENST00000497580 RGS17Q9UGC6 210 aaPredicted RBP12.66□□□□□ -0.38
GAPVD1-220ENST00000497580 RIMKLBQ9ULI2 386 aa12.66□□□□□ -0.38
GAPVD1-220ENST00000497580 SCML1Q9UN30 329 aa12.66□□□□□ -0.38
GAPVD1-220ENST00000497580 UBR3Q6ZT12 1888 aa12.65□□□□□ -0.38
GAPVD1-220ENST00000497580 MYL12BO14950 172 aa12.65□□□□□ -0.38
GAPVD1-220ENST00000497580 WISP3O95389 354 aaPredicted RBP12.65□□□□□ -0.38
GAPVD1-220ENST00000497580 MYL12AP19105 171 aa12.65□□□□□ -0.38
GAPVD1-220ENST00000497580 SSX1Q16384 188 aa12.65□□□□□ -0.38
GAPVD1-220ENST00000497580 SLC35F1Q5T1Q4 408 aa12.65□□□□□ -0.38
GAPVD1-220ENST00000497580 LIPKQ5VXJ0 399 aa12.65□□□□□ -0.38
GAPVD1-220ENST00000497580 CFAP77Q6ZQR2 320 aa12.65□□□□□ -0.38
GAPVD1-220ENST00000497580 ZNF598Q86UK7 904 aaKnown RBP12.65□□□□□ -0.38
GAPVD1-220ENST00000497580 METTL2AQ96IZ6 378 aaKnown RBP12.65□□□□□ -0.38
GAPVD1-220ENST00000497580 PPP3R2Q96LZ3 170 aa12.65□□□□□ -0.38
GAPVD1-220ENST00000497580 SMOQ99835 787 aa12.65□□□□□ -0.38
GAPVD1-220ENST00000497580 SEMA3CQ99985 751 aa12.65□□□□□ -0.38
GAPVD1-220ENST00000497580 DERL2Q9GZP9 239 aa12.65□□□□□ -0.38
GAPVD1-220ENST00000497580 RACGAP1Q9H0H5 632 aa12.65□□□□□ -0.38
GAPVD1-220ENST00000497580 FAM220BPB1ANY3 271 aa12.65□□□□□ -0.38
GAPVD1-220ENST00000497580 TRIM77I1YAP6 450 aa12.65□□□□□ -0.38
GAPVD1-220ENST00000497580 GPR39O43194 453 aa12.65□□□□□ -0.38
GAPVD1-220ENST00000497580 LDB2O43679 373 aa12.65□□□□□ -0.38
GAPVD1-220ENST00000497580 CACNG3O60359 315 aa12.65□□□□□ -0.38
GAPVD1-220ENST00000497580 C9P02748 559 aa12.65□□□□□ -0.38
GAPVD1-220ENST00000497580 SLC2A2P11168 524 aaPredicted RBP12.65□□□□□ -0.38
GAPVD1-220ENST00000497580 ADCYAP1R1P41586 468 aa12.65□□□□□ -0.38
GAPVD1-220ENST00000497580 OR1E2P47887 323 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms