RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 BDKRB2P30411 391 aa3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 CSF2RBP32927 897 aa3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 CYP2C18P33260 490 aa3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 MSX2P35548 267 aaPredicted RBP3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 GPX4P36969 197 aaPredicted RBP3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 RPL35P42766 123 aaKnown RBP3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 MAGEB1P43366 347 aa3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 PKNOX1P55347 436 aa3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 PSME3P61289 254 aa3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 VSNL1P62760 191 aa3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 ERVK-8P63133 956 aa3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 FMO1Q01740 532 aa3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 SPIBQ01892 262 aa3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 MRPL49Q13405 166 aaKnown RBP3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 TNFAIP1Q13829 316 aa3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 IL18Q14116 193 aa3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 DRAP1Q14919 205 aaPredicted RBP3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 TOMM34Q15785 309 aaPredicted RBP3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 ZNF568Q3ZCX4 644 aa3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 ZNF628Q5EBL2 1059 aa3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 ARMCX4Q5H9R4 360 aa3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 ACER2Q5QJU3 275 aa3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 PDZK1Q5T2W1 519 aa3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 ARMC12Q5T9G4 340 aa3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 AGAP7PQ5VUJ5 663 aa3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 MFSD14CQ5VZR4 134 aa3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 LIPJQ5W064 366 aa3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 KRT39Q6A163 491 aa3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 MFSD5Q6N075 450 aa3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 PMF1Q6P1K2 205 aa3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 TMIGD1Q6UXZ0 262 aa3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 PRRT2Q7Z6L0 340 aaPredicted RBP3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 CUZD1Q86UP6 607 aa3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 ERI1Q8IV48 349 aaKnown RBP3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 GPR135Q8IZ08 494 aa3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 WDTC1Q8N5D0 677 aa3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 POMGNT2Q8NAT1 580 aa3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 OR2L8Q8NGY9 312 aa3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 OR52J3Q8NH60 311 aa3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 DTX3LQ8TDB6 740 aa3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 CHURC1Q8WUH1 139 aa3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 C22orf15Q8WYQ4 148 aa3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 ST8SIA2Q92186 375 aa3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 ESR2Q92731 530 aa3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 DLG3Q92796 817 aa3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 AP2M1Q96CW1 435 aa3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 TCEAL4Q96EI5 215 aa3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 LOXL4Q96JB6 756 aa3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 C16orf92Q96LL3 132 aa3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 ZNF641Q96N77 438 aaPredicted RBP3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 SPATA13Q96N96 652 aa3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 FOPNLQ96NB1 174 aa3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 QKIQ96PU8 341 aaKnown RBP eCLIP3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 GCNAQ96QF7 691 aa3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 RBM15Q96T37 977 aaKnown RBP eCLIP3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 SEMA3CQ99985 751 aa3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 ORAI3Q9BRQ5 295 aa3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 FUCA2Q9BTY2 467 aa3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 GPR87Q9BY21 358 aa3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 KRTAP3-1Q9BYR8 98 aa3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 WWP1Q9H0M0 922 aa3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 VCX2Q9H322 139 aa3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 SMYD3Q9H7B4 428 aa3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 GLOD4Q9HC38 313 aa3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 MTPAPQ9NVV4 582 aaKnown RBP eCLIP3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 STOML2Q9UJZ1 356 aa3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 MGAT4AQ9UM21 535 aa3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 KCNK7Q9Y2U2 307 aa3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 UTP11Q9Y3A2 253 aaKnown RBP3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 COPG1Q9Y678 874 aaKnown RBP3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 FYCO1Q9BQS8 1478 aa3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 UBE4BO95155 1302 aa3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 LMTK2Q8IWU2 1503 aa3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 TEX13CA0A0J9YWL9 993 aa3□□□□□ -1.93
SNRNP48-202ENST00000496946 RFPL4AA6NLU0 287 aa3□□□□□ -1.93
SNRNP48-202ENST00000496946 EFCAB7A8K855 629 aa3□□□□□ -1.93
SNRNP48-202ENST00000496946 LRRN3E7EW58 273 aa3□□□□□ -1.93
SNRNP48-202ENST00000496946 RFPL4AL1F8VTS6 287 aa3□□□□□ -1.93
SNRNP48-202ENST00000496946 FOXE1O00358 373 aaPredicted RBP3□□□□□ -1.93
SNRNP48-202ENST00000496946 PRRG1O14668 218 aa3□□□□□ -1.93
SNRNP48-202ENST00000496946 PRRG2O14669 202 aa3□□□□□ -1.93
SNRNP48-202ENST00000496946 ARHGEF9O43307 516 aa3□□□□□ -1.93
SNRNP48-202ENST00000496946 TSPAN2O60636 221 aa3□□□□□ -1.93
SNRNP48-202ENST00000496946 DPM1O60762 260 aa3□□□□□ -1.93
SNRNP48-202ENST00000496946 GATBO75879 557 aaKnown RBP3□□□□□ -1.93
SNRNP48-202ENST00000496946 CNTN5O94779 1100 aa3□□□□□ -1.93
SNRNP48-202ENST00000496946 PEX11BO96011 259 aa3□□□□□ -1.93
SNRNP48-202ENST00000496946 EPOP01588 193 aa3□□□□□ -1.93
SNRNP48-202ENST00000496946 IFNA4P05014 189 aa3□□□□□ -1.93
SNRNP48-202ENST00000496946 KLK3P07288 261 aaPredicted RBP3□□□□□ -1.93
SNRNP48-202ENST00000496946 FAM86B2P0C5J1 330 aa3□□□□□ -1.93
SNRNP48-202ENST00000496946 ZDHHC11BP0C7U3 371 aa3□□□□□ -1.93
SNRNP48-202ENST00000496946 LINC00614P0C842 121 aa3□□□□□ -1.93
SNRNP48-202ENST00000496946 PEPDP12955 493 aa3□□□□□ -1.93
SNRNP48-202ENST00000496946 ADRB3P13945 408 aa3□□□□□ -1.93
SNRNP48-202ENST00000496946 CCNOP22674 350 aa3□□□□□ -1.93
SNRNP48-202ENST00000496946 PIK3R1P27986 724 aa3□□□□□ -1.93
SNRNP48-202ENST00000496946 HSD11B1P28845 292 aa3□□□□□ -1.93
SNRNP48-202ENST00000496946 MPIP34949 423 aa3□□□□□ -1.93
SNRNP48-202ENST00000496946 PGM1P36871 562 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms