RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 OBP2AQ9NY56 170 aa12.59□□□□□ -0.39
GARNL3-220ENST00000496711 USE1Q9NZ43 259 aa12.59□□□□□ -0.39
GARNL3-220ENST00000496711 GPR34Q9UPC5 381 aa12.59□□□□□ -0.39
GARNL3-220ENST00000496711 MAGED1Q9Y5V3 778 aaPredicted RBP12.59□□□□□ -0.39
GARNL3-220ENST00000496711 CHD7Q9P2D1 2997 aa12.59□□□□□ -0.39
GARNL3-220ENST00000496711 CPSF4O95639 269 aaKnown RBP12.59□□□□□ -0.39
GARNL3-220ENST00000496711 ANXA4P09525 319 aaPredicted RBP12.59□□□□□ -0.39
GARNL3-220ENST00000496711 LAMP1P11279 417 aa12.59□□□□□ -0.39
GARNL3-220ENST00000496711 ZNF8P17098 575 aaPredicted RBP12.59□□□□□ -0.39
GARNL3-220ENST00000496711 GPX2P18283 190 aa12.59□□□□□ -0.39
GARNL3-220ENST00000496711 CDH2P19022 906 aaPredicted RBP12.59□□□□□ -0.39
GARNL3-220ENST00000496711 IST1P53990 364 aa12.59□□□□□ -0.39
GARNL3-220ENST00000496711 RPS13P62277 151 aaKnown RBP12.59□□□□□ -0.39
GARNL3-220ENST00000496711 PPP2R2BQ00005 443 aa12.59□□□□□ -0.39
GARNL3-220ENST00000496711 VAC14Q08AM6 782 aa12.59□□□□□ -0.39
GARNL3-220ENST00000496711 LAPTM5Q13571 262 aa12.59□□□□□ -0.39
GARNL3-220ENST00000496711 TSTA3Q13630 321 aaPredicted RBP12.59□□□□□ -0.39
GARNL3-220ENST00000496711 SLBPQ14493 270 aaKnown RBP eCLIP12.59□□□□□ -0.39
GARNL3-220ENST00000496711 MYBPC3Q14896 1274 aa12.59□□□□□ -0.39
GARNL3-220ENST00000496711 SF1Q15637 639 aaKnown RBP12.59□□□□□ -0.39
GARNL3-220ENST00000496711 ZIK1Q3SY52 487 aaPredicted RBP12.59□□□□□ -0.39
GARNL3-220ENST00000496711 PAGE2BQ5JRK9 111 aa12.59□□□□□ -0.39
GARNL3-220ENST00000496711 ANKRD26P1Q6NSI1 321 aa12.59□□□□□ -0.39
GARNL3-220ENST00000496711 ZNF621Q6ZSS3 439 aa12.59□□□□□ -0.39
GARNL3-220ENST00000496711 MMAAQ8IVH4 418 aaKnown RBP12.59□□□□□ -0.39
GARNL3-220ENST00000496711 ZZZ3Q8IYH5 903 aa12.59□□□□□ -0.39
GARNL3-220ENST00000496711 CLECL1Q8IZS7 167 aa12.59□□□□□ -0.39
GARNL3-220ENST00000496711 OR2L2Q8NH16 312 aa12.59□□□□□ -0.39
GARNL3-220ENST00000496711 CHTF18Q8WVB6 975 aa12.59□□□□□ -0.39
GARNL3-220ENST00000496711 SH3KBP1Q96B97 665 aa12.59□□□□□ -0.39
GARNL3-220ENST00000496711 RBM4BQ9BQ04 359 aaKnown RBP12.59□□□□□ -0.39
GARNL3-220ENST00000496711 RBM4Q9BWF3 364 aaKnown RBP12.59□□□□□ -0.39
GARNL3-220ENST00000496711 OSBPL10Q9BXB5 764 aa12.59□□□□□ -0.39
GARNL3-220ENST00000496711 YTHDF1Q9BYJ9 559 aaKnown RBP12.59□□□□□ -0.39
GARNL3-220ENST00000496711 DPEP2Q9H4A9 486 aa12.59□□□□□ -0.39
GARNL3-220ENST00000496711 EHD1Q9H4M9 534 aa12.59□□□□□ -0.39
GARNL3-220ENST00000496711 SH2B3Q9UQQ2 575 aa12.59□□□□□ -0.39
GARNL3-220ENST00000496711 CKAP5Q14008 2032 aa12.58□□□□□ -0.4
GARNL3-220ENST00000496711 PIPSLA2A3N6 862 aa12.58□□□□□ -0.4
GARNL3-220ENST00000496711 GRXCR1A8MXD5 290 aa12.58□□□□□ -0.4
GARNL3-220ENST00000496711 H3BSA7 217 aa12.58□□□□□ -0.4
GARNL3-220ENST00000496711 PCDH7O60245 1069 aa12.58□□□□□ -0.4
GARNL3-220ENST00000496711 SH3BGRLO75368 114 aa12.58□□□□□ -0.4
GARNL3-220ENST00000496711 POP7O75817 140 aaKnown RBP12.58□□□□□ -0.4
GARNL3-220ENST00000496711 NPPBP16860 134 aa12.58□□□□□ -0.4
GARNL3-220ENST00000496711 P2RY2P41231 377 aa12.58□□□□□ -0.4
GARNL3-220ENST00000496711 IL12RB1P42701 662 aa12.58□□□□□ -0.4
GARNL3-220ENST00000496711 MAGEA2P43356 314 aa12.58□□□□□ -0.4
GARNL3-220ENST00000496711 DYNC1I2Q13409 638 aaKnown RBP12.58□□□□□ -0.4
GARNL3-220ENST00000496711 RBBP5Q15291 538 aaKnown RBP12.58□□□□□ -0.4
GARNL3-220ENST00000496711 DUSP6Q16828 381 aa12.58□□□□□ -0.4
GARNL3-220ENST00000496711 VMACQ2NL98 169 aa12.58□□□□□ -0.4
GARNL3-220ENST00000496711 HKDC1Q2TB90 917 aa12.58□□□□□ -0.4
GARNL3-220ENST00000496711 LRRC23Q53EV4 343 aaPredicted RBP12.58□□□□□ -0.4
GARNL3-220ENST00000496711 CATSPEREQ5SY80 951 aa12.58□□□□□ -0.4
GARNL3-220ENST00000496711 CCNYL2Q5T2Q4 361 aa12.58□□□□□ -0.4
GARNL3-220ENST00000496711 CPTPQ5TA50 214 aa12.58□□□□□ -0.4
GARNL3-220ENST00000496711 CPZQ66K79 652 aa12.58□□□□□ -0.4
GARNL3-220ENST00000496711 ZCCHC8Q6NZY4 707 aaKnown RBP12.58□□□□□ -0.4
GARNL3-220ENST00000496711 SPESP1Q6UW49 350 aa12.58□□□□□ -0.4
GARNL3-220ENST00000496711 UNC5DQ6UXZ4 953 aa12.58□□□□□ -0.4
GARNL3-220ENST00000496711 PGBD3Q8N328 593 aa12.58□□□□□ -0.4
GARNL3-220ENST00000496711 ST13P5Q8NFI4 369 aaPredicted RBP12.58□□□□□ -0.4
GARNL3-220ENST00000496711 GPR156Q8NFN8 814 aa12.58□□□□□ -0.4
GARNL3-220ENST00000496711 PJA1Q8NG27 643 aa12.58□□□□□ -0.4
GARNL3-220ENST00000496711 OR5K1Q8NHB7 308 aa12.58□□□□□ -0.4
GARNL3-220ENST00000496711 ADAMTS16Q8TE57 1224 aa12.58□□□□□ -0.4
GARNL3-220ENST00000496711 RAB7BQ96AH8 199 aa12.58□□□□□ -0.4
GARNL3-220ENST00000496711 HIC2Q96JB3 615 aa12.58□□□□□ -0.4
GARNL3-220ENST00000496711 MPP4Q96JB8 637 aa12.58□□□□□ -0.4
GARNL3-220ENST00000496711 HDAC8Q9BY41 377 aa12.58□□□□□ -0.4
GARNL3-220ENST00000496711 CCDC177Q9NQR7 707 aaPredicted RBP12.58□□□□□ -0.4
GARNL3-220ENST00000496711 AASDHPPTQ9NRN7 309 aa12.58□□□□□ -0.4
GARNL3-220ENST00000496711 RSL24D1Q9UHA3 163 aaKnown RBP12.58□□□□□ -0.4
GARNL3-220ENST00000496711 BTNL2Q9UIR0 455 aa12.58□□□□□ -0.4
GARNL3-220ENST00000496711 GNG14A0A1W2PPG7 69 aa12.57□□□□□ -0.4
GARNL3-220ENST00000496711 TBC1D3BA6NDS4 549 aa12.57□□□□□ -0.4
GARNL3-220ENST00000496711 MGAT4DA6NG13 374 aa12.57□□□□□ -0.4
GARNL3-220ENST00000496711 FOXE1O00358 373 aaPredicted RBP12.57□□□□□ -0.4
GARNL3-220ENST00000496711 E2F6O75461 281 aa12.57□□□□□ -0.4
GARNL3-220ENST00000496711 ZNF682O95780 498 aa12.57□□□□□ -0.4
GARNL3-220ENST00000496711 C1GALT1C1LP0DN25 315 aa12.57□□□□□ -0.4
GARNL3-220ENST00000496711 EN2P19622 333 aaPredicted RBP12.57□□□□□ -0.4
GARNL3-220ENST00000496711 FCARP24071 287 aa12.57□□□□□ -0.4
GARNL3-220ENST00000496711 ACADLP28330 430 aa12.57□□□□□ -0.4
GARNL3-220ENST00000496711 ESRRGP62508 458 aa12.57□□□□□ -0.4
GARNL3-220ENST00000496711 NFE2L1Q14494 772 aa12.57□□□□□ -0.4
GARNL3-220ENST00000496711 PLCL1Q15111 1095 aa12.57□□□□□ -0.4
GARNL3-220ENST00000496711 ANXA8L1Q5VT79 327 aa12.57□□□□□ -0.4
GARNL3-220ENST00000496711 GALNT18Q6P9A2 607 aa12.57□□□□□ -0.4
GARNL3-220ENST00000496711 GPR141Q7Z602 305 aa12.57□□□□□ -0.4
GARNL3-220ENST00000496711 LAS2Q8IYD9 372 aa12.57□□□□□ -0.4
GARNL3-220ENST00000496711 LRRC56Q8IYG6 542 aaPredicted RBP12.57□□□□□ -0.4
GARNL3-220ENST00000496711 CPA6Q8N4T0 437 aa12.57□□□□□ -0.4
GARNL3-220ENST00000496711 VPS37AQ8NEZ2 397 aa12.57□□□□□ -0.4
GARNL3-220ENST00000496711 SLC5A11Q8WWX8 675 aa12.57□□□□□ -0.4
GARNL3-220ENST00000496711 SNX19Q92543 992 aa12.57□□□□□ -0.4
GARNL3-220ENST00000496711 TMIGD2Q96BF3 282 aa12.57□□□□□ -0.4
GARNL3-220ENST00000496711 CXorf40BQ96DE9 158 aa12.57□□□□□ -0.4
GARNL3-220ENST00000496711 MUS81Q96NY9 551 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms