RNA–Protein interactions for RNA: ENST00000496205.1

CLK1-214, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 480 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-214ENST00000496205 CTDSPLO15194 276 aa3.36□□□□□ -1.87
CLK1-214ENST00000496205 FLRT2O43155 660 aa3.36□□□□□ -1.87
CLK1-214ENST00000496205 KINO60870 393 aaKnown RBP3.36□□□□□ -1.87
CLK1-214ENST00000496205 RTN2O75298 545 aa3.36□□□□□ -1.87
CLK1-214ENST00000496205 SLC16A8O95907 504 aa3.36□□□□□ -1.87
CLK1-214ENST00000496205 DLATP10515 647 aaKnown RBP3.36□□□□□ -1.87
CLK1-214ENST00000496205 CETPP11597 493 aa3.36□□□□□ -1.87
CLK1-214ENST00000496205 DARSP14868 501 aaKnown RBP3.36□□□□□ -1.87
CLK1-214ENST00000496205 LIFP15018 202 aa3.36□□□□□ -1.87
CLK1-214ENST00000496205 GAP43P17677 238 aa3.36□□□□□ -1.87
CLK1-214ENST00000496205 EFNA1P20827 205 aaPredicted RBP3.36□□□□□ -1.87
CLK1-214ENST00000496205 CDH3P22223 829 aa3.36□□□□□ -1.87
CLK1-214ENST00000496205 HSD17B3P37058 310 aa3.36□□□□□ -1.87
CLK1-214ENST00000496205 CASP3P42574 277 aa3.36□□□□□ -1.87
CLK1-214ENST00000496205 RPL21P46778 160 aaKnown RBP3.36□□□□□ -1.87
CLK1-214ENST00000496205 OR3A1P47881 315 aa3.36□□□□□ -1.87
CLK1-214ENST00000496205 LINC01547P58512 204 aaPredicted RBP3.36□□□□□ -1.87
CLK1-214ENST00000496205 ACTN3Q08043 901 aaPredicted RBP3.36□□□□□ -1.87
CLK1-214ENST00000496205 P2RY6Q15077 328 aa3.36□□□□□ -1.87
CLK1-214ENST00000496205 FUT11Q495W5 492 aa3.36□□□□□ -1.87
CLK1-214ENST00000496205 GPR33Q49SQ1 333 aa3.36□□□□□ -1.87
CLK1-214ENST00000496205 IQCCQ4KMZ1 466 aa3.36□□□□□ -1.87
CLK1-214ENST00000496205 SLC39A12Q504Y0 691 aa3.36□□□□□ -1.87
CLK1-214ENST00000496205 C14orf177Q52M58 125 aa3.36□□□□□ -1.87
CLK1-214ENST00000496205 TOR1AIP1Q5JTV8 583 aa3.36□□□□□ -1.87
CLK1-214ENST00000496205 TMEM270Q6UE05 265 aa3.36□□□□□ -1.87
CLK1-214ENST00000496205 PIGWQ7Z7B1 504 aa3.36□□□□□ -1.87
CLK1-214ENST00000496205 DZIP1Q86YF9 867 aaKnown RBP3.36□□□□□ -1.87
CLK1-214ENST00000496205 MAB21L3Q8N8X9 362 aa3.36□□□□□ -1.87
CLK1-214ENST00000496205 AMER3Q8N944 861 aa3.36□□□□□ -1.87
CLK1-214ENST00000496205 PPFIBP2Q8ND30 876 aa3.36□□□□□ -1.87
CLK1-214ENST00000496205 DMBX1Q8NFW5 382 aa3.36□□□□□ -1.87
CLK1-214ENST00000496205 OR7G3Q8NG95 312 aa3.36□□□□□ -1.87
CLK1-214ENST00000496205 OR52N5Q8NH56 324 aa3.36□□□□□ -1.87
CLK1-214ENST00000496205 PHLDA1Q8WV24 401 aaPredicted RBP3.36□□□□□ -1.87
CLK1-214ENST00000496205 KRT35Q92764 455 aa3.36□□□□□ -1.87
CLK1-214ENST00000496205 SGF29Q96ES7 293 aa3.36□□□□□ -1.87
CLK1-214ENST00000496205 AK8Q96MA6 479 aa3.36□□□□□ -1.87
CLK1-214ENST00000496205 TSGA13Q96PP4 275 aa3.36□□□□□ -1.87
CLK1-214ENST00000496205 RHNO1Q9BSD3 238 aa3.36□□□□□ -1.87
CLK1-214ENST00000496205 TRMT61BQ9BVS5 477 aaKnown RBP3.36□□□□□ -1.87
CLK1-214ENST00000496205 ZNF350Q9GZX5 532 aa3.36□□□□□ -1.87
CLK1-214ENST00000496205 C1orf21Q9H246 121 aa3.36□□□□□ -1.87
CLK1-214ENST00000496205 TMEM206Q9H813 350 aa3.36□□□□□ -1.87
CLK1-214ENST00000496205 UPF2Q9HAU5 1272 aaKnown RBP3.36□□□□□ -1.87
CLK1-214ENST00000496205 IARS2Q9NSE4 1012 aaKnown RBP3.36□□□□□ -1.87
CLK1-214ENST00000496205 ABCB8Q9NUT2 735 aa3.36□□□□□ -1.87
CLK1-214ENST00000496205 P4HTMQ9NXG6 502 aa3.36□□□□□ -1.87
CLK1-214ENST00000496205 SPHK1Q9NYA1 384 aa3.36□□□□□ -1.87
CLK1-214ENST00000496205 SYNJ2BP-COX16A0A087WUM0 186 aa3.35□□□□□ -1.87
CLK1-214ENST00000496205 RNF103-CHMP3A0A140T963 221 aa3.35□□□□□ -1.87
CLK1-214ENST00000496205 A0A1W2PN81 502 aa3.35□□□□□ -1.87
CLK1-214ENST00000496205 ANKRD61A6NGH8 418 aa3.35□□□□□ -1.87
CLK1-214ENST00000496205 F8VVB4 439 aa3.35□□□□□ -1.87
CLK1-214ENST00000496205 F8VWA3 439 aa3.35□□□□□ -1.87
CLK1-214ENST00000496205 RNF103O00237 685 aa3.35□□□□□ -1.87
CLK1-214ENST00000496205 ATP6V0E1O15342 81 aa3.35□□□□□ -1.87
CLK1-214ENST00000496205 TXNL1O43396 289 aa3.35□□□□□ -1.87
CLK1-214ENST00000496205 PRPSAP2O60256 369 aa3.35□□□□□ -1.87
CLK1-214ENST00000496205 ZG16O60844 167 aa3.35□□□□□ -1.87
CLK1-214ENST00000496205 RPS6KA5O75582 802 aa3.35□□□□□ -1.87
CLK1-214ENST00000496205 PIGNO95427 931 aa3.35□□□□□ -1.87
CLK1-214ENST00000496205 OLFM2O95897 454 aa3.35□□□□□ -1.87
CLK1-214ENST00000496205 STAG3L1P0CL83 205 aa3.35□□□□□ -1.87
CLK1-214ENST00000496205 CD59P13987 128 aa3.35□□□□□ -1.87
CLK1-214ENST00000496205 AMD1P17707 334 aa3.35□□□□□ -1.87
CLK1-214ENST00000496205 ITIH1P19827 911 aa3.35□□□□□ -1.87
CLK1-214ENST00000496205 CCND3P30281 292 aaPredicted RBP3.35□□□□□ -1.87
CLK1-214ENST00000496205 CHRNA7P36544 502 aa3.35□□□□□ -1.87
CLK1-214ENST00000496205 CDX1P47902 265 aaPredicted RBP3.35□□□□□ -1.87
CLK1-214ENST00000496205 NR2C2P49116 596 aa3.35□□□□□ -1.87
CLK1-214ENST00000496205 STARD6P59095 220 aa3.35□□□□□ -1.87
CLK1-214ENST00000496205 STX1BP61266 288 aa3.35□□□□□ -1.87
CLK1-214ENST00000496205 ASIC1P78348 528 aa3.35□□□□□ -1.87
CLK1-214ENST00000496205 TEFQ10587 303 aa3.35□□□□□ -1.87
CLK1-214ENST00000496205 ILF2Q12905 390 aaKnown RBP3.35□□□□□ -1.87
CLK1-214ENST00000496205 RPA4Q13156 261 aa3.35□□□□□ -1.87
CLK1-214ENST00000496205 CBX3Q13185 183 aa3.35□□□□□ -1.87
CLK1-214ENST00000496205 RCN2Q14257 317 aa3.35□□□□□ -1.87
CLK1-214ENST00000496205 PPA1Q15181 289 aa3.35□□□□□ -1.87
CLK1-214ENST00000496205 RBBP5Q15291 538 aaKnown RBP3.35□□□□□ -1.87
CLK1-214ENST00000496205 FAM46CQ5VWP2 391 aa3.35□□□□□ -1.87
CLK1-214ENST00000496205 OR4A47Q6IF82 309 aa3.35□□□□□ -1.87
CLK1-214ENST00000496205 ZNF770Q6IQ21 691 aaPredicted RBP3.35□□□□□ -1.87
CLK1-214ENST00000496205 ISCA2Q86U28 154 aa3.35□□□□□ -1.87
CLK1-214ENST00000496205 AQP12AQ8IXF9 295 aa3.35□□□□□ -1.87
CLK1-214ENST00000496205 LRTM2Q8N967 370 aa3.35□□□□□ -1.87
CLK1-214ENST00000496205 SPATA18Q8TC71 538 aa3.35□□□□□ -1.87
CLK1-214ENST00000496205 N4BP2L2Q92802 583 aaPredicted RBP3.35□□□□□ -1.87
CLK1-214ENST00000496205 TEKT1Q969V4 418 aa3.35□□□□□ -1.87
CLK1-214ENST00000496205 PDLIM5Q96HC4 596 aaKnown RBP3.35□□□□□ -1.87
CLK1-214ENST00000496205 C16orf45Q96MC5 204 aaPredicted RBP3.35□□□□□ -1.87
CLK1-214ENST00000496205 GDAP1L1Q96MZ0 367 aa3.35□□□□□ -1.87
CLK1-214ENST00000496205 HNRNPABQ99729 332 aaKnown RBP3.35□□□□□ -1.87
CLK1-214ENST00000496205 MAP3K3Q99759 626 aa3.35□□□□□ -1.87
CLK1-214ENST00000496205 URM1Q9BTM9 101 aaKnown RBP3.35□□□□□ -1.87
CLK1-214ENST00000496205 SNX25Q9H3E2 840 aa3.35□□□□□ -1.87
CLK1-214ENST00000496205 THAP9Q9H5L6 903 aa3.35□□□□□ -1.87
CLK1-214ENST00000496205 FAM207AQ9NSI2 230 aaPredicted RBP3.35□□□□□ -1.87
CLK1-214ENST00000496205 IL19Q9UHD0 177 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms