RNA–Protein interactions for RNA: ENST00000495630.1

TMEM53-209, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-209ENST00000495630 FAM114A2Q9NRY5 505 aa16.6■□□□□ 0.25
TMEM53-209ENST00000495630 C19orf25Q9UFG5 118 aaPredicted RBP16.6■□□□□ 0.25
TMEM53-209ENST00000495630 A0A0U1RQJ8 604 aa16.59■□□□□ 0.25
TMEM53-209ENST00000495630 ASPDHA6ND91 283 aa16.59■□□□□ 0.25
TMEM53-209ENST00000495630 LIASO43766 372 aa16.59■□□□□ 0.25
TMEM53-209ENST00000495630 PSIP1O75475 530 aaKnown RBP16.59■□□□□ 0.25
TMEM53-209ENST00000495630 SEC24DO94855 1032 aaPredicted RBP16.59■□□□□ 0.25
TMEM53-209ENST00000495630 IFNB1P01574 187 aa16.59■□□□□ 0.25
TMEM53-209ENST00000495630 PTMSP20962 102 aa16.59■□□□□ 0.25
TMEM53-209ENST00000495630 CD96P40200 585 aa16.59■□□□□ 0.25
TMEM53-209ENST00000495630 MAT1AQ00266 395 aaKnown RBP16.59■□□□□ 0.25
TMEM53-209ENST00000495630 TUBA3CQ13748 450 aa16.59■□□□□ 0.25
TMEM53-209ENST00000495630 CDSNQ15517 529 aa16.59■□□□□ 0.25
TMEM53-209ENST00000495630 OASLQ15646 514 aaKnown RBP16.59■□□□□ 0.25
TMEM53-209ENST00000495630 MEP1AQ16819 746 aa16.59■□□□□ 0.25
TMEM53-209ENST00000495630 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.59■□□□□ 0.25
TMEM53-209ENST00000495630 CTSL3PQ5NE16 218 aa16.59■□□□□ 0.25
TMEM53-209ENST00000495630 TUBA3EQ6PEY2 450 aa16.59■□□□□ 0.25
TMEM53-209ENST00000495630 BEST3Q8N1M1 668 aa16.59■□□□□ 0.25
TMEM53-209ENST00000495630 ATG4AQ8WYN0 398 aa16.59■□□□□ 0.25
TMEM53-209ENST00000495630 TCF12Q99081 682 aa16.59■□□□□ 0.25
TMEM53-209ENST00000495630 UTP23Q9BRU9 249 aaKnown RBP16.59■□□□□ 0.25
TMEM53-209ENST00000495630 TSPY26PQ9H489 355 aa16.59■□□□□ 0.25
TMEM53-209ENST00000495630 TAC3Q9UHF0 121 aa16.59■□□□□ 0.25
TMEM53-209ENST00000495630 ZNF148Q9UQR1 794 aa16.59■□□□□ 0.25
TMEM53-209ENST00000495630 REXO2Q9Y3B8 237 aaKnown RBP16.59■□□□□ 0.25
TMEM53-209ENST00000495630 ARHGEF33A8MVX0 844 aa16.58■□□□□ 0.24
TMEM53-209ENST00000495630 FAM227AF5H4B4 570 aa16.58■□□□□ 0.24
TMEM53-209ENST00000495630 AP3B1O00203 1094 aa16.58■□□□□ 0.24
TMEM53-209ENST00000495630 PFDN6O15212 129 aa16.58■□□□□ 0.24
TMEM53-209ENST00000495630 ASNA1O43681 348 aa16.58■□□□□ 0.24
TMEM53-209ENST00000495630 CD46P15529 392 aa16.58■□□□□ 0.24
TMEM53-209ENST00000495630 EEF1DP29692 281 aaKnown RBP16.58■□□□□ 0.24
TMEM53-209ENST00000495630 FMO4P31512 558 aa16.58■□□□□ 0.24
TMEM53-209ENST00000495630 NPY2RP49146 381 aa16.58■□□□□ 0.24
TMEM53-209ENST00000495630 AGTR2P50052 363 aa16.58■□□□□ 0.24
TMEM53-209ENST00000495630 PNLIPRP1P54315 467 aa16.58■□□□□ 0.24
TMEM53-209ENST00000495630 ADARP55265 1226 aaKnown RBP16.58■□□□□ 0.24
TMEM53-209ENST00000495630 KRTAP10-9P60411 292 aa16.58■□□□□ 0.24
TMEM53-209ENST00000495630 TSTA3Q13630 321 aaPredicted RBP16.58■□□□□ 0.24
TMEM53-209ENST00000495630 MRNIPQ6NTE8 343 aa16.58■□□□□ 0.24
TMEM53-209ENST00000495630 CEP97Q8IW35 865 aa16.58■□□□□ 0.24
TMEM53-209ENST00000495630 HORMAD2Q8N7B1 307 aa16.58■□□□□ 0.24
TMEM53-209ENST00000495630 RNF214Q8ND24 703 aa16.58■□□□□ 0.24
TMEM53-209ENST00000495630 M1APQ8TC57 530 aa16.58■□□□□ 0.24
TMEM53-209ENST00000495630 SCMH1Q96GD3 660 aa16.58■□□□□ 0.24
TMEM53-209ENST00000495630 SIGLEC12Q96PQ1 595 aa16.58■□□□□ 0.24
TMEM53-209ENST00000495630 PKP4Q99569 1192 aa16.58■□□□□ 0.24
TMEM53-209ENST00000495630 TRIM5Q9C035 493 aa16.58■□□□□ 0.24
TMEM53-209ENST00000495630 IL22Q9GZX6 179 aa16.58■□□□□ 0.24
TMEM53-209ENST00000495630 ENKD1Q9H0I2 346 aa16.58■□□□□ 0.24
TMEM53-209ENST00000495630 KCNK13Q9HB14 408 aa16.58■□□□□ 0.24
TMEM53-209ENST00000495630 MCCC2Q9HCC0 563 aa16.58■□□□□ 0.24
TMEM53-209ENST00000495630 PCYOX1Q9UHG3 505 aa16.58■□□□□ 0.24
TMEM53-209ENST00000495630 PACSIN2Q9UNF0 486 aaPredicted RBP16.58■□□□□ 0.24
TMEM53-209ENST00000495630 AKAP9Q99996 3911 aa16.58■□□□□ 0.24
TMEM53-209ENST00000495630 IGHV3-20A0A0C4DH32 117 aa16.57■□□□□ 0.24
TMEM53-209ENST00000495630 NPIPA5E9PKD4 350 aa16.57■□□□□ 0.24
TMEM53-209ENST00000495630 CDK2AP1O14519 115 aa16.57■□□□□ 0.24
TMEM53-209ENST00000495630 NSA2O95478 260 aaKnown RBP16.57■□□□□ 0.24
TMEM53-209ENST00000495630 ESR1P03372 595 aa16.57■□□□□ 0.24
TMEM53-209ENST00000495630 CATP04040 527 aaKnown RBP16.57■□□□□ 0.24
TMEM53-209ENST00000495630 CHRM3P20309 590 aa16.57■□□□□ 0.24
TMEM53-209ENST00000495630 NMBRP28336 390 aa16.57■□□□□ 0.24
TMEM53-209ENST00000495630 SESN2P58004 480 aaPredicted RBP16.57■□□□□ 0.24
TMEM53-209ENST00000495630 PTK6Q13882 451 aa16.57■□□□□ 0.24
TMEM53-209ENST00000495630 OR1C1Q15619 314 aa16.57■□□□□ 0.24
TMEM53-209ENST00000495630 EXT1Q16394 746 aa16.57■□□□□ 0.24
TMEM53-209ENST00000495630 KLHL38Q2WGJ6 581 aa16.57■□□□□ 0.24
TMEM53-209ENST00000495630 KRTAP21-3Q3LHN1 58 aa16.57■□□□□ 0.24
TMEM53-209ENST00000495630 RNF187Q5TA31 235 aaPredicted RBP16.57■□□□□ 0.24
TMEM53-209ENST00000495630 FCRLBQ6BAA4 426 aa16.57■□□□□ 0.24
TMEM53-209ENST00000495630 PCGF5Q86SE9 256 aa16.57■□□□□ 0.24
TMEM53-209ENST00000495630 TMEM178AQ8NBL3 297 aa16.57■□□□□ 0.24
TMEM53-209ENST00000495630 ACBD4Q8NC06 268 aa16.57■□□□□ 0.24
TMEM53-209ENST00000495630 OR9A4Q8NGU2 314 aa16.57■□□□□ 0.24
TMEM53-209ENST00000495630 OR51Q1Q8NH59 317 aa16.57■□□□□ 0.24
TMEM53-209ENST00000495630 MCOLN3Q8TDD5 553 aa16.57■□□□□ 0.24
TMEM53-209ENST00000495630 PHF10Q8WUB8 498 aaKnown RBP16.57■□□□□ 0.24
TMEM53-209ENST00000495630 CHTF18Q8WVB6 975 aa16.57■□□□□ 0.24
TMEM53-209ENST00000495630 LPGAT1Q92604 370 aa16.57■□□□□ 0.24
TMEM53-209ENST00000495630 MMP25Q9NPA2 562 aa16.57■□□□□ 0.24
TMEM53-209ENST00000495630 KLHL1Q9NR64 748 aa16.57■□□□□ 0.24
TMEM53-209ENST00000495630 BFARQ9NZS9 450 aa16.57■□□□□ 0.24
TMEM53-209ENST00000495630 PAK5Q9P286 719 aa16.57■□□□□ 0.24
TMEM53-209ENST00000495630 NPIPA1Q9UND3 350 aa16.57■□□□□ 0.24
TMEM53-209ENST00000495630 DRG1Q9Y295 367 aaKnown RBP16.57■□□□□ 0.24
TMEM53-209ENST00000495630 KCNE1BA0A087WTH5 132 aa16.56■□□□□ 0.24
TMEM53-209ENST00000495630 E7ENX8 843 aa16.56■□□□□ 0.24
TMEM53-209ENST00000495630 P2RX6O15547 441 aa16.56■□□□□ 0.24
TMEM53-209ENST00000495630 NIPSNAP2O75323 286 aa16.56■□□□□ 0.24
TMEM53-209ENST00000495630 SLC16A8O95907 504 aa16.56■□□□□ 0.24
TMEM53-209ENST00000495630 SP1P08047 785 aa16.56■□□□□ 0.24
TMEM53-209ENST00000495630 ETS1P14921 441 aa16.56■□□□□ 0.24
TMEM53-209ENST00000495630 CRADDP78560 199 aa16.56■□□□□ 0.24
TMEM53-209ENST00000495630 TAP2Q03519 686 aa16.56■□□□□ 0.24
TMEM53-209ENST00000495630 SKOR2Q2VWA4 1001 aaPredicted RBP16.56■□□□□ 0.24
TMEM53-209ENST00000495630 MINDY4Q4G0A6 757 aa16.56■□□□□ 0.24
TMEM53-209ENST00000495630 ACSBG2Q5FVE4 666 aa16.56■□□□□ 0.24
TMEM53-209ENST00000495630 MFSD4BQ5TF39 518 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms