RNA–Protein interactions for RNA: ENST00000494334.1

COL1A1-208, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 396 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-208ENST00000494334 TTC29Q8NA56 475 aaPredicted RBP12.94□□□□□ -0.34
COL1A1-208ENST00000494334 ACMSDQ8TDX5 336 aa12.94□□□□□ -0.34
COL1A1-208ENST00000494334 MR1Q95460 341 aa12.94□□□□□ -0.34
COL1A1-208ENST00000494334 CRELD1Q96HD1 420 aa12.94□□□□□ -0.34
COL1A1-208ENST00000494334 SCYL1Q96KG9 808 aa12.94□□□□□ -0.34
COL1A1-208ENST00000494334 NDC1Q9BTX1 674 aa12.94□□□□□ -0.34
COL1A1-208ENST00000494334 SARGQ9BW04 601 aa12.94□□□□□ -0.34
COL1A1-208ENST00000494334 CAPS2Q9BXY5 557 aa12.94□□□□□ -0.34
COL1A1-208ENST00000494334 SPNS1Q9H2V7 528 aa12.94□□□□□ -0.34
COL1A1-208ENST00000494334 PELI2Q9HAT8 420 aa12.94□□□□□ -0.34
COL1A1-208ENST00000494334 CUTCQ9NTM9 273 aa12.94□□□□□ -0.34
COL1A1-208ENST00000494334 DNAJC11Q9NVH1 559 aa12.94□□□□□ -0.34
COL1A1-208ENST00000494334 GPRC5BQ9NZH0 403 aa12.94□□□□□ -0.34
COL1A1-208ENST00000494334 XPR1Q9UBH6 696 aa12.94□□□□□ -0.34
COL1A1-208ENST00000494334 CROTQ9UKG9 612 aa12.94□□□□□ -0.34
COL1A1-208ENST00000494334 SRPK3Q9UPE1 567 aa12.94□□□□□ -0.34
COL1A1-208ENST00000494334 DMXL2Q8TDJ6 3036 aa12.94□□□□□ -0.34
COL1A1-208ENST00000494334 TLDC2A0PJX2 215 aa12.93□□□□□ -0.34
COL1A1-208ENST00000494334 HYKKA2RU49 373 aa12.93□□□□□ -0.34
COL1A1-208ENST00000494334 CDH16O75309 829 aa12.93□□□□□ -0.34
COL1A1-208ENST00000494334 MED26O95402 600 aa12.93□□□□□ -0.34
COL1A1-208ENST00000494334 SBK3P0C264 359 aa12.93□□□□□ -0.34
COL1A1-208ENST00000494334 PYGBP11216 843 aa12.93□□□□□ -0.34
COL1A1-208ENST00000494334 GFAPP14136 432 aa12.93□□□□□ -0.34
COL1A1-208ENST00000494334 GNAZP19086 355 aa12.93□□□□□ -0.34
COL1A1-208ENST00000494334 TCN2P20062 427 aa12.93□□□□□ -0.34
COL1A1-208ENST00000494334 ALAS2P22557 587 aa12.93□□□□□ -0.34
COL1A1-208ENST00000494334 VARSP26640 1264 aaKnown RBP12.93□□□□□ -0.34
COL1A1-208ENST00000494334 GRK3P35626 688 aa12.93□□□□□ -0.34
COL1A1-208ENST00000494334 DLSTP36957 453 aa12.93□□□□□ -0.34
COL1A1-208ENST00000494334 BCL6P41182 706 aa12.93□□□□□ -0.34
COL1A1-208ENST00000494334 UCNP55089 124 aa12.93□□□□□ -0.34
COL1A1-208ENST00000494334 CDC16Q13042 620 aa12.93□□□□□ -0.34
COL1A1-208ENST00000494334 PFKFB4Q16877 469 aa12.93□□□□□ -0.34
COL1A1-208ENST00000494334 HKDC1Q2TB90 917 aa12.93□□□□□ -0.34
COL1A1-208ENST00000494334 FAM214AQ32MH5 1076 aa12.93□□□□□ -0.34
COL1A1-208ENST00000494334 C1orf189Q5VU69 101 aa12.93□□□□□ -0.34
COL1A1-208ENST00000494334 YOD1Q5VVQ6 348 aaPredicted RBP12.93□□□□□ -0.34
COL1A1-208ENST00000494334 SH2D5Q6ZV89 423 aa12.93□□□□□ -0.34
COL1A1-208ENST00000494334 TTLL10Q6ZVT0 673 aa12.93□□□□□ -0.34
COL1A1-208ENST00000494334 VN1R4Q7Z5H5 301 aa12.93□□□□□ -0.34
COL1A1-208ENST00000494334 TMPRSS11BQ86T26 416 aa12.93□□□□□ -0.34
COL1A1-208ENST00000494334 CSNK1A1LQ8N752 337 aa12.93□□□□□ -0.34
COL1A1-208ENST00000494334 ZNF740Q8NDX6 193 aa12.93□□□□□ -0.34
COL1A1-208ENST00000494334 PROKR1Q8TCW9 393 aa12.93□□□□□ -0.34
COL1A1-208ENST00000494334 CT55Q8WUE5 264 aa12.93□□□□□ -0.34
COL1A1-208ENST00000494334 UBTD2Q8WUN7 234 aa12.93□□□□□ -0.34
COL1A1-208ENST00000494334 RERGQ96A58 199 aaPredicted RBP12.93□□□□□ -0.34
COL1A1-208ENST00000494334 THAP11Q96EK4 314 aa12.93□□□□□ -0.34
COL1A1-208ENST00000494334 GBP5Q96PP8 586 aa12.93□□□□□ -0.34
COL1A1-208ENST00000494334 RUFY1Q96T51 708 aa12.93□□□□□ -0.34
COL1A1-208ENST00000494334 MRPL57Q9BQC6 102 aaKnown RBP12.93□□□□□ -0.34
COL1A1-208ENST00000494334 ROPN1BQ9BZX4 212 aaPredicted RBP12.93□□□□□ -0.34
COL1A1-208ENST00000494334 CHST8Q9H2A9 424 aa12.93□□□□□ -0.34
COL1A1-208ENST00000494334 GPN2Q9H9Y4 310 aaPredicted RBP12.93□□□□□ -0.34
COL1A1-208ENST00000494334 ROPN1Q9HAT0 212 aaPredicted RBP12.93□□□□□ -0.34
COL1A1-208ENST00000494334 CPNE5Q9HCH3 593 aa12.93□□□□□ -0.34
COL1A1-208ENST00000494334 TXLNGQ9NUQ3 528 aa12.93□□□□□ -0.34
COL1A1-208ENST00000494334 TMEM216Q9P0N5 145 aa12.93□□□□□ -0.34
COL1A1-208ENST00000494334 CPSF2Q9P2I0 782 aaKnown RBP12.93□□□□□ -0.34
COL1A1-208ENST00000494334 IL17BQ9UHF5 180 aa12.93□□□□□ -0.34
COL1A1-208ENST00000494334 RUVBL1Q9Y265 456 aaKnown RBP12.93□□□□□ -0.34
COL1A1-208ENST00000494334 PCDHGA4Q9Y5G9 962 aa12.93□□□□□ -0.34
COL1A1-208ENST00000494334 K7ENP7 123 aa12.92□□□□□ -0.34
COL1A1-208ENST00000494334 K7EPI3 171 aa12.92□□□□□ -0.34
COL1A1-208ENST00000494334 TK2O00142 265 aa12.92□□□□□ -0.34
COL1A1-208ENST00000494334 TXNDC9O14530 226 aa12.92□□□□□ -0.34
COL1A1-208ENST00000494334 P2RX6O15547 441 aa12.92□□□□□ -0.34
COL1A1-208ENST00000494334 OR1F1O43749 312 aa12.92□□□□□ -0.34
COL1A1-208ENST00000494334 PRAMEF4O60810 478 aa12.92□□□□□ -0.34
COL1A1-208ENST00000494334 STATHP02808 62 aa12.92□□□□□ -0.34
COL1A1-208ENST00000494334 CAPN1P07384 714 aa12.92□□□□□ -0.34
COL1A1-208ENST00000494334 C1GALT1C1LP0DN25 315 aa12.92□□□□□ -0.34
COL1A1-208ENST00000494334 KRT15P19012 456 aa12.92□□□□□ -0.34
COL1A1-208ENST00000494334 EPORP19235 508 aa12.92□□□□□ -0.34
COL1A1-208ENST00000494334 AGXTP21549 392 aa12.92□□□□□ -0.34
COL1A1-208ENST00000494334 SCTRP47872 440 aa12.92□□□□□ -0.34
COL1A1-208ENST00000494334 ALDH18A1P54886 795 aaKnown RBP12.92□□□□□ -0.34
COL1A1-208ENST00000494334 TMPRSS3P57727 454 aa12.92□□□□□ -0.34
COL1A1-208ENST00000494334 DCDP81605 110 aaKnown RBP12.92□□□□□ -0.34
COL1A1-208ENST00000494334 REEP5Q00765 189 aa12.92□□□□□ -0.34
COL1A1-208ENST00000494334 IFFO1Q0D2I5 559 aa12.92□□□□□ -0.34
COL1A1-208ENST00000494334 DNASE1L3Q13609 305 aa12.92□□□□□ -0.34
COL1A1-208ENST00000494334 SETDB1Q15047 1291 aa12.92□□□□□ -0.34
COL1A1-208ENST00000494334 PCBP2Q15366 365 aaKnown RBP eCLIP12.92□□□□□ -0.34
COL1A1-208ENST00000494334 PDK4Q16654 411 aa12.92□□□□□ -0.34
COL1A1-208ENST00000494334 COL28A1Q2UY09 1125 aa12.92□□□□□ -0.34
COL1A1-208ENST00000494334 PRAMEF9Q5VWM5 478 aa12.92□□□□□ -0.34
COL1A1-208ENST00000494334 ATG9BQ674R7 924 aa12.92□□□□□ -0.34
COL1A1-208ENST00000494334 C16orf46Q6P387 395 aa12.92□□□□□ -0.34
COL1A1-208ENST00000494334 INO80CQ6PI98 192 aaPredicted RBP12.92□□□□□ -0.34
COL1A1-208ENST00000494334 SLCO4C1Q6ZQN7 724 aa12.92□□□□□ -0.34
COL1A1-208ENST00000494334 LRRC70Q7Z2Q7 622 aa12.92□□□□□ -0.34
COL1A1-208ENST00000494334 LCA5Q86VQ0 697 aa12.92□□□□□ -0.34
COL1A1-208ENST00000494334 ARHGEF39Q8N4T4 335 aa12.92□□□□□ -0.34
COL1A1-208ENST00000494334 DTWD1Q8N5C7 304 aa12.92□□□□□ -0.34
COL1A1-208ENST00000494334 SNX31Q8N9S9 440 aa12.92□□□□□ -0.34
COL1A1-208ENST00000494334 MFSD9Q8NBP5 474 aa12.92□□□□□ -0.34
COL1A1-208ENST00000494334 KIAA1143Q96AT1 154 aaPredicted RBP12.92□□□□□ -0.34
COL1A1-208ENST00000494334 TM4SF19Q96DZ7 209 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms