RNA–Protein interactions for RNA: ENST00000493919.5

BRCA1-222, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-222ENST00000493919 DLG2Q15700 870 aa11.25□□□□□ -0.61
BRCA1-222ENST00000493919 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.25□□□□□ -0.61
BRCA1-222ENST00000493919 LYPD8Q6UX82 237 aa11.25□□□□□ -0.61
BRCA1-222ENST00000493919 IGFN1Q86VF2 1251 aa11.25□□□□□ -0.61
BRCA1-222ENST00000493919 HORMAD1Q86X24 394 aa11.25□□□□□ -0.61
BRCA1-222ENST00000493919 NPWQ8N729 165 aa11.25□□□□□ -0.61
BRCA1-222ENST00000493919 MDGA1Q8NFP4 955 aa11.25□□□□□ -0.61
BRCA1-222ENST00000493919 RNASE11Q8TAA1 199 aaKnown RBP11.25□□□□□ -0.61
BRCA1-222ENST00000493919 PYDC1Q8WXC3 89 aa11.25□□□□□ -0.61
BRCA1-222ENST00000493919 MRPL48Q96GC5 212 aaKnown RBP11.25□□□□□ -0.61
BRCA1-222ENST00000493919 MYO19Q96H55 970 aa11.25□□□□□ -0.61
BRCA1-222ENST00000493919 DOK1Q99704 481 aa11.25□□□□□ -0.61
BRCA1-222ENST00000493919 ZNF670Q9BS34 389 aa11.25□□□□□ -0.61
BRCA1-222ENST00000493919 EFHD1Q9BUP0 239 aa11.25□□□□□ -0.61
BRCA1-222ENST00000493919 RACGAP1Q9H0H5 632 aa11.25□□□□□ -0.61
BRCA1-222ENST00000493919 MAGEH1Q9H213 219 aa11.25□□□□□ -0.61
BRCA1-222ENST00000493919 OR51M1Q9H341 326 aa11.25□□□□□ -0.61
BRCA1-222ENST00000493919 NOL6Q9H6R4 1146 aaKnown RBP11.25□□□□□ -0.61
BRCA1-222ENST00000493919 RANBP3Q9H6Z4 567 aaPredicted RBP11.25□□□□□ -0.61
BRCA1-222ENST00000493919 LRRC40Q9H9A6 602 aa11.25□□□□□ -0.61
BRCA1-222ENST00000493919 ZNF556Q9HAH1 456 aa11.25□□□□□ -0.61
BRCA1-222ENST00000493919 FAM86C1Q9NVL1 165 aa11.25□□□□□ -0.61
BRCA1-222ENST00000493919 MID2Q9UJV3 735 aa11.25□□□□□ -0.61
BRCA1-222ENST00000493919 PPIL1Q9Y3C6 166 aa11.25□□□□□ -0.61
BRCA1-222ENST00000493919 TRAF6Q9Y4K3 522 aa11.25□□□□□ -0.61
BRCA1-222ENST00000493919 NYNRINQ9P2P1 1898 aaKnown RBP11.24□□□□□ -0.61
BRCA1-222ENST00000493919 GRID2IPA4D2P6 1211 aa11.24□□□□□ -0.61
BRCA1-222ENST00000493919 WASH4PA8MWX3 477 aa11.24□□□□□ -0.61
BRCA1-222ENST00000493919 DCLK1O15075 740 aa11.24□□□□□ -0.61
BRCA1-222ENST00000493919 SLC31A2O15432 143 aa11.24□□□□□ -0.61
BRCA1-222ENST00000493919 PSTPIP1O43586 416 aa11.24□□□□□ -0.61
BRCA1-222ENST00000493919 CST8O60676 142 aa11.24□□□□□ -0.61
BRCA1-222ENST00000493919 LILRB5O75023 590 aa11.24□□□□□ -0.61
BRCA1-222ENST00000493919 PAPSS2O95340 614 aaPredicted RBP11.24□□□□□ -0.61
BRCA1-222ENST00000493919 NSA2O95478 260 aaKnown RBP11.24□□□□□ -0.61
BRCA1-222ENST00000493919 MT-CO1P00395 513 aa11.24□□□□□ -0.61
BRCA1-222ENST00000493919 IFNA4P05014 189 aa11.24□□□□□ -0.61
BRCA1-222ENST00000493919 TCN1P20061 433 aaPredicted RBP11.24□□□□□ -0.61
BRCA1-222ENST00000493919 PIK3R1P27986 724 aa11.24□□□□□ -0.61
BRCA1-222ENST00000493919 ACTR1BP42025 376 aa11.24□□□□□ -0.61
BRCA1-222ENST00000493919 GNG10P50151 68 aa11.24□□□□□ -0.61
BRCA1-222ENST00000493919 DNA2P51530 1060 aa11.24□□□□□ -0.61
BRCA1-222ENST00000493919 ESRRGP62508 458 aa11.24□□□□□ -0.61
BRCA1-222ENST00000493919 IKZF1Q13422 519 aa11.24□□□□□ -0.61
BRCA1-222ENST00000493919 BMPR2Q13873 1038 aa11.24□□□□□ -0.61
BRCA1-222ENST00000493919 MLC1Q15049 377 aa11.24□□□□□ -0.61
BRCA1-222ENST00000493919 PDK2Q15119 407 aa11.24□□□□□ -0.61
BRCA1-222ENST00000493919 PARP15Q460N3 678 aa11.24□□□□□ -0.61
BRCA1-222ENST00000493919 LBHQ53QV2 105 aaPredicted RBP11.24□□□□□ -0.61
BRCA1-222ENST00000493919 RSBN1Q5VWQ0 802 aaPredicted RBP11.24□□□□□ -0.61
BRCA1-222ENST00000493919 TMEM65Q6PI78 240 aa11.24□□□□□ -0.61
BRCA1-222ENST00000493919 KIAA1324Q6UXG2 1013 aaKnown RBP11.24□□□□□ -0.61
BRCA1-222ENST00000493919 Q6ZVU0 165 aa11.24□□□□□ -0.61
BRCA1-222ENST00000493919 FAM122BQ7Z309 247 aa11.24□□□□□ -0.61
BRCA1-222ENST00000493919 KIF18BQ86Y91 864 aa11.24□□□□□ -0.61
BRCA1-222ENST00000493919 CREG2Q8IUH2 290 aa11.24□□□□□ -0.61
BRCA1-222ENST00000493919 GALNT12Q8IXK2 581 aa11.24□□□□□ -0.61
BRCA1-222ENST00000493919 KLHL7Q8IXQ5 586 aa11.24□□□□□ -0.61
BRCA1-222ENST00000493919 RP9Q8TA86 221 aaKnown RBP11.24□□□□□ -0.61
BRCA1-222ENST00000493919 ASB12Q8WXK4 309 aa11.24□□□□□ -0.61
BRCA1-222ENST00000493919 NXPE2Q96DL1 559 aa11.24□□□□□ -0.61
BRCA1-222ENST00000493919 LRRC37BQ96QE4 947 aa11.24□□□□□ -0.61
BRCA1-222ENST00000493919 CCNL2Q96S94 520 aaPredicted RBP11.24□□□□□ -0.61
BRCA1-222ENST00000493919 BTBD10Q9BSF8 475 aa11.24□□□□□ -0.61
BRCA1-222ENST00000493919 CHID1Q9BWS9 393 aa11.24□□□□□ -0.61
BRCA1-222ENST00000493919 MMP27Q9H306 513 aa11.24□□□□□ -0.61
BRCA1-222ENST00000493919 EPB41L5Q9HCM4 733 aa11.24□□□□□ -0.61
BRCA1-222ENST00000493919 CCDC59Q9P031 241 aaKnown RBP11.24□□□□□ -0.61
BRCA1-222ENST00000493919 TMEM9Q9P0T7 183 aa11.24□□□□□ -0.61
BRCA1-222ENST00000493919 IL19Q9UHD0 177 aa11.24□□□□□ -0.61
BRCA1-222ENST00000493919 SNX12Q9UMY4 172 aa11.24□□□□□ -0.61
BRCA1-222ENST00000493919 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.24□□□□□ -0.61
BRCA1-222ENST00000493919 UGT2A1Q9Y4X1 527 aa11.24□□□□□ -0.61
BRCA1-222ENST00000493919 CKAP5Q14008 2032 aa11.24□□□□□ -0.61
BRCA1-222ENST00000493919 LINC00862A6NCI5 91 aa11.23□□□□□ -0.61
BRCA1-222ENST00000493919 ZNF729A6NN14 1252 aaPredicted RBP11.23□□□□□ -0.61
BRCA1-222ENST00000493919 SPAG7O75391 227 aa11.23□□□□□ -0.61
BRCA1-222ENST00000493919 MBP02144 154 aa11.23□□□□□ -0.61
BRCA1-222ENST00000493919 FAM153BP0C7A2 387 aa11.23□□□□□ -0.61
BRCA1-222ENST00000493919 PRF1P14222 555 aa11.23□□□□□ -0.61
BRCA1-222ENST00000493919 NFKB1P19838 968 aa11.23□□□□□ -0.61
BRCA1-222ENST00000493919 KDELR1P24390 212 aa11.23□□□□□ -0.61
BRCA1-222ENST00000493919 CD79BP40259 229 aa11.23□□□□□ -0.61
BRCA1-222ENST00000493919 CASP3P42574 277 aa11.23□□□□□ -0.61
BRCA1-222ENST00000493919 CARSP49589 748 aaKnown RBP11.23□□□□□ -0.61
BRCA1-222ENST00000493919 ARSEP51690 589 aa11.23□□□□□ -0.61
BRCA1-222ENST00000493919 HK3P52790 923 aa11.23□□□□□ -0.61
BRCA1-222ENST00000493919 DRG2P55039 364 aaKnown RBP11.23□□□□□ -0.61
BRCA1-222ENST00000493919 ARF5P84085 180 aa11.23□□□□□ -0.61
BRCA1-222ENST00000493919 TRAF2Q12933 501 aa11.23□□□□□ -0.61
BRCA1-222ENST00000493919 ART3Q13508 389 aa11.23□□□□□ -0.61
BRCA1-222ENST00000493919 ENPP2Q13822 863 aa11.23□□□□□ -0.61
BRCA1-222ENST00000493919 DDX39BQ13838 428 aaKnown RBP11.23□□□□□ -0.61
BRCA1-222ENST00000493919 LLGL1Q15334 1064 aa11.23□□□□□ -0.61
BRCA1-222ENST00000493919 HNRNPA1L2Q32P51 320 aaKnown RBP11.23□□□□□ -0.61
BRCA1-222ENST00000493919 FAM153CQ494X1 144 aa11.23□□□□□ -0.61
BRCA1-222ENST00000493919 PLEKHG7Q6ZR37 379 aa11.23□□□□□ -0.61
BRCA1-222ENST00000493919 LINC00523Q86TU6 105 aa11.23□□□□□ -0.61
BRCA1-222ENST00000493919 ARMC8Q8IUR7 673 aa11.23□□□□□ -0.61
BRCA1-222ENST00000493919 TIGD4Q8IY51 512 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms