RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 LTFP02788 710 aa6.67□□□□□ -1.34
VPS13B-205ENST00000493587 ALPPP05187 535 aa6.67□□□□□ -1.34
VPS13B-205ENST00000493587 CLUP10909 449 aa6.67□□□□□ -1.34
VPS13B-205ENST00000493587 HAPLN1P10915 354 aaPredicted RBP6.67□□□□□ -1.34
VPS13B-205ENST00000493587 ARSBP15848 533 aa6.67□□□□□ -1.34
VPS13B-205ENST00000493587 C4BPBP20851 252 aa6.67□□□□□ -1.34
VPS13B-205ENST00000493587 RORAP35398 523 aa6.67□□□□□ -1.34
VPS13B-205ENST00000493587 PIGAP37287 484 aa6.67□□□□□ -1.34
VPS13B-205ENST00000493587 KIR2DL3P43628 341 aa6.67□□□□□ -1.34
VPS13B-205ENST00000493587 RGS19P49795 217 aa6.67□□□□□ -1.34
VPS13B-205ENST00000493587 PFKFB4Q16877 469 aa6.67□□□□□ -1.34
VPS13B-205ENST00000493587 SYT6Q5T7P8 510 aaPredicted RBP6.67□□□□□ -1.34
VPS13B-205ENST00000493587 MAP1SQ66K74 1059 aaPredicted RBP6.67□□□□□ -1.34
VPS13B-205ENST00000493587 ZNF470Q6ECI4 717 aa6.67□□□□□ -1.34
VPS13B-205ENST00000493587 FAM45BPQ6NSW5 357 aa6.67□□□□□ -1.34
VPS13B-205ENST00000493587 FUT10Q6P4F1 479 aa6.67□□□□□ -1.34
VPS13B-205ENST00000493587 USP53Q70EK8 1073 aa6.67□□□□□ -1.34
VPS13B-205ENST00000493587 NLRC3Q7RTR2 1065 aa6.67□□□□□ -1.34
VPS13B-205ENST00000493587 SLC9B2Q86UD5 537 aa6.67□□□□□ -1.34
VPS13B-205ENST00000493587 UNC5BQ8IZJ1 945 aa6.67□□□□□ -1.34
VPS13B-205ENST00000493587 HS3ST5Q8IZT8 346 aa6.67□□□□□ -1.34
VPS13B-205ENST00000493587 ZNF248Q8NDW4 579 aa6.67□□□□□ -1.34
VPS13B-205ENST00000493587 PHOSPHO1Q8TCT1 267 aa6.67□□□□□ -1.34
VPS13B-205ENST00000493587 C18orf25Q96B23 403 aaPredicted RBP6.67□□□□□ -1.34
VPS13B-205ENST00000493587 ERMAPQ96PL5 475 aaPredicted RBP6.67□□□□□ -1.34
VPS13B-205ENST00000493587 ALG2Q9H553 416 aa6.67□□□□□ -1.34
VPS13B-205ENST00000493587 AMBNQ9NP70 447 aa6.67□□□□□ -1.34
VPS13B-205ENST00000493587 ACOT13Q9NPJ3 140 aa6.67□□□□□ -1.34
VPS13B-205ENST00000493587 MED11Q9P086 117 aa6.67□□□□□ -1.34
VPS13B-205ENST00000493587 GHRLQ9UBU3 117 aa6.67□□□□□ -1.34
VPS13B-205ENST00000493587 ZDHHC2Q9UIJ5 367 aa6.67□□□□□ -1.34
VPS13B-205ENST00000493587 HCN2Q9UL51 889 aa6.67□□□□□ -1.34
VPS13B-205ENST00000493587 NCKAP1Q9Y2A7 1128 aa6.67□□□□□ -1.34
VPS13B-205ENST00000493587 KCNMB2Q9Y691 235 aa6.67□□□□□ -1.34
VPS13B-205ENST00000493587 ANKDD1BA6NHY2 528 aa6.66□□□□□ -1.34
VPS13B-205ENST00000493587 CLDN24A6NM45 220 aa6.66□□□□□ -1.34
VPS13B-205ENST00000493587 ZNF729A6NN14 1252 aaPredicted RBP6.66□□□□□ -1.34
VPS13B-205ENST00000493587 DISC1C4P0D8 188 aa6.66□□□□□ -1.34
VPS13B-205ENST00000493587 H7C0S8 307 aa6.66□□□□□ -1.34
VPS13B-205ENST00000493587 DNASE2O00115 360 aaPredicted RBP6.66□□□□□ -1.34
VPS13B-205ENST00000493587 NME4O00746 187 aa6.66□□□□□ -1.34
VPS13B-205ENST00000493587 ADAM12O43184 909 aa6.66□□□□□ -1.34
VPS13B-205ENST00000493587 ANXA6P08133 673 aa6.66□□□□□ -1.34
VPS13B-205ENST00000493587 SPP1P10451 314 aa6.66□□□□□ -1.34
VPS13B-205ENST00000493587 ITGB8P26012 769 aa6.66□□□□□ -1.34
VPS13B-205ENST00000493587 CNTFP26441 200 aa6.66□□□□□ -1.34
VPS13B-205ENST00000493587 KIAA1024LP59773 190 aa6.66□□□□□ -1.34
VPS13B-205ENST00000493587 DCDC1P59894 354 aa6.66□□□□□ -1.34
VPS13B-205ENST00000493587 RAB5BP61020 215 aa6.66□□□□□ -1.34
VPS13B-205ENST00000493587 MC2RQ01718 297 aa6.66□□□□□ -1.34
VPS13B-205ENST00000493587 MVKQ03426 396 aa6.66□□□□□ -1.34
VPS13B-205ENST00000493587 MXD1Q05195 221 aa6.66□□□□□ -1.34
VPS13B-205ENST00000493587 PTPN11Q06124 597 aaPredicted RBP6.66□□□□□ -1.34
VPS13B-205ENST00000493587 CRYZQ08257 329 aaKnown RBP6.66□□□□□ -1.34
VPS13B-205ENST00000493587 ILF3Q12906 894 aaKnown RBP eCLIP6.66□□□□□ -1.34
VPS13B-205ENST00000493587 CDK5R2Q13319 367 aa6.66□□□□□ -1.34
VPS13B-205ENST00000493587 SNTB1Q13884 538 aaKnown RBP6.66□□□□□ -1.34
VPS13B-205ENST00000493587 LARS2Q15031 903 aaKnown RBP6.66□□□□□ -1.34
VPS13B-205ENST00000493587 FCN2Q15485 313 aa6.66□□□□□ -1.34
VPS13B-205ENST00000493587 FAM98BQ52LJ0 330 aaKnown RBP6.66□□□□□ -1.34
VPS13B-205ENST00000493587 TCTE1Q5JU00 501 aa6.66□□□□□ -1.34
VPS13B-205ENST00000493587 FAM74A1Q5RGS3 127 aa6.66□□□□□ -1.34
VPS13B-205ENST00000493587 PLA2G4FQ68DD2 849 aa6.66□□□□□ -1.34
VPS13B-205ENST00000493587 PRSS58Q8IYP2 241 aa6.66□□□□□ -1.34
VPS13B-205ENST00000493587 ZNF614Q8N883 585 aa6.66□□□□□ -1.34
VPS13B-205ENST00000493587 OR6B3Q8NGW1 331 aa6.66□□□□□ -1.34
VPS13B-205ENST00000493587 SVIPQ8NHG7 77 aa6.66□□□□□ -1.34
VPS13B-205ENST00000493587 C12orf42Q96LP6 360 aa6.66□□□□□ -1.34
VPS13B-205ENST00000493587 CSPG4P5Q96PW8 444 aa6.66□□□□□ -1.34
VPS13B-205ENST00000493587 TSNAXQ99598 290 aaKnown RBP6.66□□□□□ -1.34
VPS13B-205ENST00000493587 SLC30A3Q99726 388 aa6.66□□□□□ -1.34
VPS13B-205ENST00000493587 UNKLQ9H9P5 680 aaKnown RBP6.66□□□□□ -1.34
VPS13B-205ENST00000493587 CCNB1IP1Q9NPC3 277 aa6.66□□□□□ -1.34
VPS13B-205ENST00000493587 HACL1Q9UJ83 578 aa6.66□□□□□ -1.34
VPS13B-205ENST00000493587 PURGQ9UJV8 347 aaKnown RBP6.66□□□□□ -1.34
VPS13B-205ENST00000493587 NOCTQ9UK39 431 aaKnown RBP6.66□□□□□ -1.34
VPS13B-205ENST00000493587 CRYL1Q9Y2S2 319 aa6.66□□□□□ -1.34
VPS13B-205ENST00000493587 hCG_1818297A0A087WSY0 165 aa6.66□□□□□ -1.34
VPS13B-205ENST00000493587 A0A0B4J293 547 aa6.66□□□□□ -1.34
VPS13B-205ENST00000493587 DSCR3O14972 297 aa6.66□□□□□ -1.34
VPS13B-205ENST00000493587 KIAA0513O60268 411 aa6.66□□□□□ -1.34
VPS13B-205ENST00000493587 CFDP00746 253 aaPredicted RBP6.66□□□□□ -1.34
VPS13B-205ENST00000493587 SERPINA1P01009 418 aa6.66□□□□□ -1.34
VPS13B-205ENST00000493587 CST1P01037 141 aa6.66□□□□□ -1.34
VPS13B-205ENST00000493587 ANXA3P12429 323 aa6.66□□□□□ -1.34
VPS13B-205ENST00000493587 GJA1P17302 382 aa6.66□□□□□ -1.34
VPS13B-205ENST00000493587 LAP3P28838 519 aa6.66□□□□□ -1.34
VPS13B-205ENST00000493587 EIF2S3P41091 472 aaKnown RBP6.66□□□□□ -1.34
VPS13B-205ENST00000493587 MASP1P48740 699 aa6.66□□□□□ -1.34
VPS13B-205ENST00000493587 SESN2P58004 480 aaPredicted RBP6.66□□□□□ -1.34
VPS13B-205ENST00000493587 CLINT1Q14677 625 aa6.66□□□□□ -1.34
VPS13B-205ENST00000493587 CCDC157Q569K6 752 aa6.66□□□□□ -1.34
VPS13B-205ENST00000493587 ZNF484Q5JVG2 852 aa6.66□□□□□ -1.34
VPS13B-205ENST00000493587 DRICH1Q6PGQ1 229 aaPredicted RBP6.66□□□□□ -1.34
VPS13B-205ENST00000493587 SPAG16Q8N0X2 631 aa6.66□□□□□ -1.34
VPS13B-205ENST00000493587 ANKRD52Q8NB46 1076 aa6.66□□□□□ -1.34
VPS13B-205ENST00000493587 IPMKQ8NFU5 416 aa6.66□□□□□ -1.34
VPS13B-205ENST00000493587 DNAJB8Q8NHS0 232 aa6.66□□□□□ -1.34
VPS13B-205ENST00000493587 POC1BQ8TC44 478 aa6.66□□□□□ -1.34
VPS13B-205ENST00000493587 PYCR2Q96C36 320 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms