RNA–Protein interactions for RNA: ENST00000493582.5

HDAC4-210, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,188 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-210ENST00000493582 GPR150Q8NGU9 434 aa11.34□□□□□ -0.59
HDAC4-210ENST00000493582 PSMG2Q969U7 264 aa11.34□□□□□ -0.59
HDAC4-210ENST00000493582 SH3KBP1Q96B97 665 aa11.34□□□□□ -0.59
HDAC4-210ENST00000493582 HMCESQ96FZ2 354 aa11.34□□□□□ -0.59
HDAC4-210ENST00000493582 C1orf74Q96LT6 269 aa11.34□□□□□ -0.59
HDAC4-210ENST00000493582 MCUBQ9NWR8 336 aa11.34□□□□□ -0.59
HDAC4-210ENST00000493582 CFAP20Q9Y6A4 193 aaKnown RBP11.34□□□□□ -0.59
HDAC4-210ENST00000493582 ATP6V1G2-DDX39BF2Z307 99 aa11.34□□□□□ -0.59
HDAC4-210ENST00000493582 ONECUT3O60422 494 aaPredicted RBP11.34□□□□□ -0.59
HDAC4-210ENST00000493582 GUCA1CO95843 209 aa11.34□□□□□ -0.59
HDAC4-210ENST00000493582 C9P02748 559 aa11.34□□□□□ -0.59
HDAC4-210ENST00000493582 HLA-DMAP28067 261 aa11.34□□□□□ -0.59
HDAC4-210ENST00000493582 RORCP51449 518 aa11.34□□□□□ -0.59
HDAC4-210ENST00000493582 ABHD18Q0P651 414 aa11.34□□□□□ -0.59
HDAC4-210ENST00000493582 GTF2H2Q13888 395 aa11.34□□□□□ -0.59
HDAC4-210ENST00000493582 TIMM50Q3ZCQ8 353 aa11.34□□□□□ -0.59
HDAC4-210ENST00000493582 SLC39A12Q504Y0 691 aa11.34□□□□□ -0.59
HDAC4-210ENST00000493582 RAB41Q5JT25 222 aa11.34□□□□□ -0.59
HDAC4-210ENST00000493582 GTF2H2CQ6P1K8 395 aa11.34□□□□□ -0.59
HDAC4-210ENST00000493582 LIMS2Q7Z4I7 341 aa11.34□□□□□ -0.59
HDAC4-210ENST00000493582 OR52J3Q8NH60 311 aa11.34□□□□□ -0.59
HDAC4-210ENST00000493582 DIRAS2Q96HU8 199 aa11.34□□□□□ -0.59
HDAC4-210ENST00000493582 SMIM14Q96QK8 99 aa11.34□□□□□ -0.59
HDAC4-210ENST00000493582 MRPL9Q9BYD2 267 aaKnown RBP11.34□□□□□ -0.59
HDAC4-210ENST00000493582 NIPAL2Q9H841 368 aa11.34□□□□□ -0.59
HDAC4-210ENST00000493582 OSER1Q9NX31 292 aa11.34□□□□□ -0.59
HDAC4-210ENST00000493582 B3GNT2Q9NY97 397 aa11.34□□□□□ -0.59
HDAC4-210ENST00000493582 GPRC5BQ9NZH0 403 aa11.34□□□□□ -0.59
HDAC4-210ENST00000493582 NYNRINQ9P2P1 1898 aaKnown RBP11.34□□□□□ -0.59
HDAC4-210ENST00000493582 PCP4L1A6NKN8 68 aa11.33□□□□□ -0.6
HDAC4-210ENST00000493582 HHLA1C9JL84 531 aa11.33□□□□□ -0.6
HDAC4-210ENST00000493582 LRATO95237 230 aa11.33□□□□□ -0.6
HDAC4-210ENST00000493582 ESR1P03372 595 aa11.33□□□□□ -0.6
HDAC4-210ENST00000493582 KDELR2P33947 212 aa11.33□□□□□ -0.6
HDAC4-210ENST00000493582 PGFP49763 221 aa11.33□□□□□ -0.6
HDAC4-210ENST00000493582 RAB25P57735 213 aa11.33□□□□□ -0.6
HDAC4-210ENST00000493582 ACVR1Q04771 509 aa11.33□□□□□ -0.6
HDAC4-210ENST00000493582 RUNX1T1Q06455 604 aa11.33□□□□□ -0.6
HDAC4-210ENST00000493582 GRIK4Q16099 956 aa11.33□□□□□ -0.6
HDAC4-210ENST00000493582 GLYR1Q49A26 553 aaPredicted RBP11.33□□□□□ -0.6
HDAC4-210ENST00000493582 PYDC2Q56P42 97 aa11.33□□□□□ -0.6
HDAC4-210ENST00000493582 ARTNQ5T4W7 220 aa11.33□□□□□ -0.6
HDAC4-210ENST00000493582 MLIPQ5VWP3 458 aa11.33□□□□□ -0.6
HDAC4-210ENST00000493582 C19orf48Q6RUI8 117 aa11.33□□□□□ -0.6
HDAC4-210ENST00000493582 ZNF598Q86UK7 904 aaKnown RBP11.33□□□□□ -0.6
HDAC4-210ENST00000493582 TMEM132CQ8N3T6 1108 aa11.33□□□□□ -0.6
HDAC4-210ENST00000493582 NKAPQ8N5F7 415 aaKnown RBP11.33□□□□□ -0.6
HDAC4-210ENST00000493582 WDR36Q8NI36 951 aaKnown RBP11.33□□□□□ -0.6
HDAC4-210ENST00000493582 CMAHPQ9Y471 501 aa11.33□□□□□ -0.6
HDAC4-210ENST00000493582 E9PAM4 449 aa11.33□□□□□ -0.6
HDAC4-210ENST00000493582 E9PQ18 207 aa11.33□□□□□ -0.6
HDAC4-210ENST00000493582 FGF10O15520 208 aaPredicted RBP11.33□□□□□ -0.6
HDAC4-210ENST00000493582 TREHO43280 583 aa11.33□□□□□ -0.6
HDAC4-210ENST00000493582 CYP17A1P05093 508 aa11.33□□□□□ -0.6
HDAC4-210ENST00000493582 LGALS2P05162 132 aa11.33□□□□□ -0.6
HDAC4-210ENST00000493582 CKMT1AP12532 417 aa11.33□□□□□ -0.6
HDAC4-210ENST00000493582 POU2F1P14859 743 aa11.33□□□□□ -0.6
HDAC4-210ENST00000493582 PRKACAP17612 351 aa11.33□□□□□ -0.6
HDAC4-210ENST00000493582 CPN2P22792 545 aa11.33□□□□□ -0.6
HDAC4-210ENST00000493582 RPS3P23396 243 aaKnown RBP eCLIP11.33□□□□□ -0.6
HDAC4-210ENST00000493582 PTPN6P29350 595 aa11.33□□□□□ -0.6
HDAC4-210ENST00000493582 IL2P60568 153 aa11.33□□□□□ -0.6
HDAC4-210ENST00000493582 OR4F3Q6IEY1 312 aa11.33□□□□□ -0.6
HDAC4-210ENST00000493582 FAM124AQ86V42 546 aa11.33□□□□□ -0.6
HDAC4-210ENST00000493582 TIGD4Q8IY51 512 aa11.33□□□□□ -0.6
HDAC4-210ENST00000493582 SLC5A8Q8N695 610 aa11.33□□□□□ -0.6
HDAC4-210ENST00000493582 SCAMP5Q8TAC9 235 aa11.33□□□□□ -0.6
HDAC4-210ENST00000493582 ARRDC2Q8TBH0 407 aa11.33□□□□□ -0.6
HDAC4-210ENST00000493582 CRELD1Q96HD1 420 aa11.33□□□□□ -0.6
HDAC4-210ENST00000493582 TMEM80Q96HE8 168 aa11.33□□□□□ -0.6
HDAC4-210ENST00000493582 GABARAPL3Q9BY60 117 aa11.33□□□□□ -0.6
HDAC4-210ENST00000493582 ABHD16BQ9H3Z7 469 aa11.33□□□□□ -0.6
HDAC4-210ENST00000493582 TRIM45Q9H8W5 580 aaPredicted RBP11.33□□□□□ -0.6
HDAC4-210ENST00000493582 LOC285095A0A1B0GVY8 99 aa11.32□□□□□ -0.6
HDAC4-210ENST00000493582 WNT9AO14904 365 aa11.32□□□□□ -0.6
HDAC4-210ENST00000493582 CHRM5P08912 532 aaPredicted RBP11.32□□□□□ -0.6
HDAC4-210ENST00000493582 TSPAN19P0C672 248 aa11.32□□□□□ -0.6
HDAC4-210ENST00000493582 ACADMP11310 421 aa11.32□□□□□ -0.6
HDAC4-210ENST00000493582 ICAM2P13598 275 aa11.32□□□□□ -0.6
HDAC4-210ENST00000493582 AQP1P29972 269 aa11.32□□□□□ -0.6
HDAC4-210ENST00000493582 EVI2BP34910 448 aa11.32□□□□□ -0.6
HDAC4-210ENST00000493582 PNPLA4P41247 253 aa11.32□□□□□ -0.6
HDAC4-210ENST00000493582 GNPDA1P46926 289 aa11.32□□□□□ -0.6
HDAC4-210ENST00000493582 HSPA7P48741 367 aa11.32□□□□□ -0.6
HDAC4-210ENST00000493582 DGKEP52429 567 aa11.32□□□□□ -0.6
HDAC4-210ENST00000493582 CXCL9Q07325 125 aa11.32□□□□□ -0.6
HDAC4-210ENST00000493582 MGAT3Q09327 533 aa11.32□□□□□ -0.6
HDAC4-210ENST00000493582 NFE2L1Q14494 772 aa11.32□□□□□ -0.6
HDAC4-210ENST00000493582 OVOS1Q6IE37 1185 aa11.32□□□□□ -0.6
HDAC4-210ENST00000493582 GET4Q7L5D6 327 aaPredicted RBP11.32□□□□□ -0.6
HDAC4-210ENST00000493582 RGL4Q8IZJ4 473 aa11.32□□□□□ -0.6
HDAC4-210ENST00000493582 RTL3Q8N8U3 475 aaKnown RBP11.32□□□□□ -0.6
HDAC4-210ENST00000493582 SENP8Q96LD8 212 aa11.32□□□□□ -0.6
HDAC4-210ENST00000493582 SEMA3CQ99985 751 aa11.32□□□□□ -0.6
HDAC4-210ENST00000493582 KCNH6Q9H252 994 aa11.32□□□□□ -0.6
HDAC4-210ENST00000493582 MIXL1Q9H2W2 232 aa11.32□□□□□ -0.6
HDAC4-210ENST00000493582 HHATLQ9HCP6 504 aa11.32□□□□□ -0.6
HDAC4-210ENST00000493582 ING3Q9NXR8 418 aa11.32□□□□□ -0.6
HDAC4-210ENST00000493582 NLKQ9UBE8 527 aa11.32□□□□□ -0.6
HDAC4-210ENST00000493582 A0A1W2PQL4 384 aaPredicted RBP11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms