RNA–Protein interactions for RNA: ENST00000493161.1

SAMM50-204, Transcript of SAMM50 sorting and assembly machinery component, human

TSL 3

Gene SAMM50, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SAMM50-204	ENST00000493161	MACROD1	Q9BQ69	325 aa		12.95	□□□□□ -0.34
SAMM50-204	ENST00000493161	DRC3	Q9H069	523 aa		12.95	□□□□□ -0.34
SAMM50-204	ENST00000493161	TSPY26P	Q9H489	355 aa		12.95	□□□□□ -0.34
SAMM50-204	ENST00000493161	KLHL1	Q9NR64	748 aa		12.95	□□□□□ -0.34
SAMM50-204	ENST00000493161	ABCF3	Q9NUQ8	709 aa		12.95	□□□□□ -0.34
SAMM50-204	ENST00000493161	MEMO1	Q9Y316	297 aa		12.95	□□□□□ -0.34
SAMM50-204	ENST00000493161	SETD2	Q9BYW2	2564 aa	Predicted RBP	12.95	□□□□□ -0.34
SAMM50-204	ENST00000493161	CCDC168	Q8NDH2	2452 aa		12.95	□□□□□ -0.34
SAMM50-204	ENST00000493161	NF1	P21359	2839 aa		12.94	□□□□□ -0.34
SAMM50-204	ENST00000493161	NPIPA5	E9PKD4	350 aa		12.94	□□□□□ -0.34
SAMM50-204	ENST00000493161	MYO1C	O00159	1063 aa		12.94	□□□□□ -0.34
SAMM50-204	ENST00000493161	KPNA5	O15131	536 aa		12.94	□□□□□ -0.34
SAMM50-204	ENST00000493161	CLDN14	O95500	239 aa		12.94	□□□□□ -0.34
SAMM50-204	ENST00000493161	F7	P08709	466 aa	Predicted RBP	12.94	□□□□□ -0.34
SAMM50-204	ENST00000493161	AGA	P20933	346 aa		12.94	□□□□□ -0.34
SAMM50-204	ENST00000493161	STIP1	P31948	543 aa	Known RBP	12.94	□□□□□ -0.34
SAMM50-204	ENST00000493161	CASP6	P55212	293 aa		12.94	□□□□□ -0.34
SAMM50-204	ENST00000493161	HSF1	Q00613	529 aa		12.94	□□□□□ -0.34
SAMM50-204	ENST00000493161	PRDX1	Q06830	199 aa	Known RBP	12.94	□□□□□ -0.34
SAMM50-204	ENST00000493161	SNX1	Q13596	522 aa		12.94	□□□□□ -0.34
SAMM50-204	ENST00000493161	KCNJ11	Q14654	390 aa		12.94	□□□□□ -0.34
SAMM50-204	ENST00000493161	ANKRD20A4	Q4UJ75	823 aa		12.94	□□□□□ -0.34
SAMM50-204	ENST00000493161	GARNL3	Q5VVW2	1013 aa		12.94	□□□□□ -0.34
SAMM50-204	ENST00000493161	SPINK14	Q6IE38	97 aa		12.94	□□□□□ -0.34
SAMM50-204	ENST00000493161	H3F3C	Q6NXT2	135 aa		12.94	□□□□□ -0.34
SAMM50-204	ENST00000493161	C3P1	Q6ZMU1	363 aa		12.94	□□□□□ -0.34
SAMM50-204	ENST00000493161		Q6ZPB1	254 aa	Predicted RBP	12.94	□□□□□ -0.34
SAMM50-204	ENST00000493161	CPEB2	Q7Z5Q1	589 aa	Known RBP	12.94	□□□□□ -0.34
SAMM50-204	ENST00000493161	LRRC6	Q86X45	466 aa		12.94	□□□□□ -0.34
SAMM50-204	ENST00000493161	SPPL2C	Q8IUH8	684 aa		12.94	□□□□□ -0.34
SAMM50-204	ENST00000493161	CRLF3	Q8IUI8	442 aa		12.94	□□□□□ -0.34
SAMM50-204	ENST00000493161	MAGEC3	Q8TD91	643 aa		12.94	□□□□□ -0.34
SAMM50-204	ENST00000493161	LPGAT1	Q92604	370 aa		12.94	□□□□□ -0.34
SAMM50-204	ENST00000493161	PEX13	Q92968	403 aa		12.94	□□□□□ -0.34
SAMM50-204	ENST00000493161	RERG	Q96A58	199 aa	Predicted RBP	12.94	□□□□□ -0.34
SAMM50-204	ENST00000493161	MRFAP1L1	Q96HT8	127 aa		12.94	□□□□□ -0.34
SAMM50-204	ENST00000493161	MAGED4	Q96JG8	741 aa		12.94	□□□□□ -0.34
SAMM50-204	ENST00000493161	TRIM5	Q9C035	493 aa		12.94	□□□□□ -0.34
SAMM50-204	ENST00000493161	NPIPA1	Q9UND3	350 aa		12.94	□□□□□ -0.34
SAMM50-204	ENST00000493161	MRFAP1	Q9Y605	127 aa		12.94	□□□□□ -0.34
SAMM50-204	ENST00000493161	PCNX1	Q96RV3	2341 aa		12.94	□□□□□ -0.34
SAMM50-204	ENST00000493161	TTI1	O43156	1089 aa		12.93	□□□□□ -0.34
SAMM50-204	ENST00000493161	PHF2	O75151	1096 aa		12.93	□□□□□ -0.34
SAMM50-204	ENST00000493161	PSIP1	O75475	530 aa	Known RBP	12.93	□□□□□ -0.34
SAMM50-204	ENST00000493161	SLC16A8	O95907	504 aa		12.93	□□□□□ -0.34
SAMM50-204	ENST00000493161	EZR	P15311	586 aa	Known RBP	12.93	□□□□□ -0.34
SAMM50-204	ENST00000493161	SSTR2	P30874	369 aa		12.93	□□□□□ -0.34
SAMM50-204	ENST00000493161	SMS	P52788	366 aa		12.93	□□□□□ -0.34
SAMM50-204	ENST00000493161	PNLIPRP1	P54315	467 aa		12.93	□□□□□ -0.34
SAMM50-204	ENST00000493161	NAA25	Q14CX7	972 aa		12.93	□□□□□ -0.34
SAMM50-204	ENST00000493161	OR1C1	Q15619	314 aa		12.93	□□□□□ -0.34
SAMM50-204	ENST00000493161	LONRF1	Q17RB8	773 aa		12.93	□□□□□ -0.34
SAMM50-204	ENST00000493161	KLHL38	Q2WGJ6	581 aa		12.93	□□□□□ -0.34
SAMM50-204	ENST00000493161	MINDY4	Q4G0A6	757 aa		12.93	□□□□□ -0.34
SAMM50-204	ENST00000493161	MFSD4B	Q5TF39	518 aa		12.93	□□□□□ -0.34
SAMM50-204	ENST00000493161	PLAG1	Q6DJT9	500 aa		12.93	□□□□□ -0.34
SAMM50-204	ENST00000493161	ADCK2	Q7Z695	626 aa		12.93	□□□□□ -0.34
SAMM50-204	ENST00000493161	ANKRD37	Q7Z713	158 aa		12.93	□□□□□ -0.34
SAMM50-204	ENST00000493161	SIAH3	Q8IW03	269 aa		12.93	□□□□□ -0.34
SAMM50-204	ENST00000493161	CHERP	Q8IWX8	916 aa	Known RBP	12.93	□□□□□ -0.34
SAMM50-204	ENST00000493161	OTUD6B	Q8N6M0	293 aa		12.93	□□□□□ -0.34
SAMM50-204	ENST00000493161	THAP3	Q8WTV1	239 aa	Predicted RBP	12.93	□□□□□ -0.34
SAMM50-204	ENST00000493161	ZNF480	Q8WV37	535 aa		12.93	□□□□□ -0.34
SAMM50-204	ENST00000493161	METTL21A	Q8WXB1	218 aa		12.93	□□□□□ -0.34
SAMM50-204	ENST00000493161	MFSD3	Q96ES6	412 aa		12.93	□□□□□ -0.34
SAMM50-204	ENST00000493161	SCMH1	Q96GD3	660 aa		12.93	□□□□□ -0.34
SAMM50-204	ENST00000493161	CCDC138	Q96M89	665 aa		12.93	□□□□□ -0.34
SAMM50-204	ENST00000493161	FRMD6	Q96NE9	622 aa		12.93	□□□□□ -0.34
SAMM50-204	ENST00000493161	SLC30A3	Q99726	388 aa		12.93	□□□□□ -0.34
SAMM50-204	ENST00000493161	HCN3	Q9P1Z3	774 aa		12.93	□□□□□ -0.34
SAMM50-204	ENST00000493161	TEKT2	Q9UIF3	430 aa		12.93	□□□□□ -0.34
SAMM50-204	ENST00000493161	ZNF148	Q9UQR1	794 aa		12.93	□□□□□ -0.34
SAMM50-204	ENST00000493161	CRYL1	Q9Y2S2	319 aa		12.93	□□□□□ -0.34
SAMM50-204	ENST00000493161	MIF4GD	A9UHW6	222 aa	Known RBP	12.92	□□□□□ -0.34
SAMM50-204	ENST00000493161		E7ENX8	843 aa		12.92	□□□□□ -0.34
SAMM50-204	ENST00000493161		H7BY64	318 aa		12.92	□□□□□ -0.34
SAMM50-204	ENST00000493161	VAPB	O95292	243 aa		12.92	□□□□□ -0.34
SAMM50-204	ENST00000493161	MYBL2	P10244	700 aa		12.92	□□□□□ -0.34
SAMM50-204	ENST00000493161	CHRM3	P20309	590 aa		12.92	□□□□□ -0.34
SAMM50-204	ENST00000493161	ATP5D	P30049	168 aa		12.92	□□□□□ -0.34
SAMM50-204	ENST00000493161	RPL22	P35268	128 aa	Known RBP	12.92	□□□□□ -0.34
SAMM50-204	ENST00000493161	AP2B1	P63010	937 aa		12.92	□□□□□ -0.34
SAMM50-204	ENST00000493161	ALDH6A1	Q02252	535 aa	Known RBP	12.92	□□□□□ -0.34
SAMM50-204	ENST00000493161	TAP2	Q03519	686 aa		12.92	□□□□□ -0.34
SAMM50-204	ENST00000493161	FAM53B	Q14153	422 aa		12.92	□□□□□ -0.34
SAMM50-204	ENST00000493161	RNFT1	Q5M7Z0	435 aa		12.92	□□□□□ -0.34
SAMM50-204	ENST00000493161	VN1R4	Q7Z5H5	301 aa		12.92	□□□□□ -0.34
SAMM50-204	ENST00000493161	FGD2	Q7Z6J4	655 aa		12.92	□□□□□ -0.34
SAMM50-204	ENST00000493161	CEP97	Q8IW35	865 aa		12.92	□□□□□ -0.34
SAMM50-204	ENST00000493161	LRRC56	Q8IYG6	542 aa	Predicted RBP	12.92	□□□□□ -0.34
SAMM50-204	ENST00000493161	MPP5	Q8N3R9	675 aa		12.92	□□□□□ -0.34
SAMM50-204	ENST00000493161	OR51Q1	Q8NH59	317 aa		12.92	□□□□□ -0.34
SAMM50-204	ENST00000493161	AGAP11	Q8TF27	550 aa		12.92	□□□□□ -0.34
SAMM50-204	ENST00000493161	HES6	Q96HZ4	224 aa		12.92	□□□□□ -0.34
SAMM50-204	ENST00000493161	ZNF354B	Q96LW1	612 aa		12.92	□□□□□ -0.34
SAMM50-204	ENST00000493161	PRAP1	Q96NZ9	151 aa		12.92	□□□□□ -0.34
SAMM50-204	ENST00000493161	PANX2	Q96RD6	677 aa		12.92	□□□□□ -0.34
SAMM50-204	ENST00000493161	TRIM51	Q9BSJ1	452 aa		12.92	□□□□□ -0.34
SAMM50-204	ENST00000493161	KCNK13	Q9HB14	408 aa		12.92	□□□□□ -0.34
SAMM50-204	ENST00000493161	IGSF5	Q9NSI5	407 aa		12.92	□□□□□ -0.34

Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms