RNA–Protein interactions for RNA: ENST00000492772.1

SND1-215, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-215ENST00000492772 NPIPA5E9PKD4 350 aa10.4□□□□□ -0.74
SND1-215ENST00000492772 E9PLN8 166 aa10.4□□□□□ -0.74
SND1-215ENST00000492772 H0YIG0 161 aa10.4□□□□□ -0.74
SND1-215ENST00000492772 MYO1CO00159 1063 aa10.4□□□□□ -0.74
SND1-215ENST00000492772 NDUFS3O75489 264 aa10.4□□□□□ -0.74
SND1-215ENST00000492772 IPO7O95373 1038 aaKnown RBP10.4□□□□□ -0.74
SND1-215ENST00000492772 MATN4O95460 622 aa10.4□□□□□ -0.74
SND1-215ENST00000492772 TSPAN12O95859 305 aa10.4□□□□□ -0.74
SND1-215ENST00000492772 HSD17B2P37059 387 aa10.4□□□□□ -0.74
SND1-215ENST00000492772 AGTR2P50052 363 aa10.4□□□□□ -0.74
SND1-215ENST00000492772 EFNA3P52797 238 aa10.4□□□□□ -0.74
SND1-215ENST00000492772 EIF3BP55884 814 aaKnown RBP10.4□□□□□ -0.74
SND1-215ENST00000492772 YBX1P67809 324 aaKnown RBP10.4□□□□□ -0.74
SND1-215ENST00000492772 MAT1AQ00266 395 aaKnown RBP10.4□□□□□ -0.74
SND1-215ENST00000492772 PTK6Q13882 451 aa10.4□□□□□ -0.74
SND1-215ENST00000492772 EXT1Q16394 746 aa10.4□□□□□ -0.74
SND1-215ENST00000492772 MINDY4Q4G0A6 757 aa10.4□□□□□ -0.74
SND1-215ENST00000492772 MFSD4BQ5TF39 518 aa10.4□□□□□ -0.74
SND1-215ENST00000492772 ICE2Q659A1 982 aa10.4□□□□□ -0.74
SND1-215ENST00000492772 ZNF425Q6IV72 752 aa10.4□□□□□ -0.74
SND1-215ENST00000492772 SUSD1Q6UWL2 747 aa10.4□□□□□ -0.74
SND1-215ENST00000492772 MEX3BQ6ZN04 569 aaKnown RBP10.4□□□□□ -0.74
SND1-215ENST00000492772 LANCL3Q6ZV70 420 aa10.4□□□□□ -0.74
SND1-215ENST00000492772 SIAH3Q8IW03 269 aa10.4□□□□□ -0.74
SND1-215ENST00000492772 UBL4BQ8N7F7 174 aa10.4□□□□□ -0.74
SND1-215ENST00000492772 TC2NQ8N9U0 490 aa10.4□□□□□ -0.74
SND1-215ENST00000492772 MCOLN3Q8TDD5 553 aa10.4□□□□□ -0.74
SND1-215ENST00000492772 AGAP11Q8TF27 550 aa10.4□□□□□ -0.74
SND1-215ENST00000492772 CA5BP1Q8WTZ4 195 aa10.4□□□□□ -0.74
SND1-215ENST00000492772 SIGLEC12Q96PQ1 595 aa10.4□□□□□ -0.74
SND1-215ENST00000492772 EBNA1BP2Q99848 306 aaKnown RBP10.4□□□□□ -0.74
SND1-215ENST00000492772 TREX2Q9BQ50 279 aaPredicted RBP10.4□□□□□ -0.74
SND1-215ENST00000492772 VKORC1Q9BQB6 163 aa10.4□□□□□ -0.74
SND1-215ENST00000492772 TSPAN10Q9H1Z9 355 aaPredicted RBP10.4□□□□□ -0.74
SND1-215ENST00000492772 SYNPO2LQ9H987 977 aa10.4□□□□□ -0.74
SND1-215ENST00000492772 KCNK13Q9HB14 408 aa10.4□□□□□ -0.74
SND1-215ENST00000492772 KLHL1Q9NR64 748 aa10.4□□□□□ -0.74
SND1-215ENST00000492772 TAC3Q9UHF0 121 aa10.4□□□□□ -0.74
SND1-215ENST00000492772 PCYOX1Q9UHG3 505 aa10.4□□□□□ -0.74
SND1-215ENST00000492772 NPIPA1Q9UND3 350 aa10.4□□□□□ -0.74
SND1-215ENST00000492772 IGHV3-20A0A0C4DH32 117 aa10.39□□□□□ -0.75
SND1-215ENST00000492772 ARHGEF33A8MVX0 844 aa10.39□□□□□ -0.75
SND1-215ENST00000492772 BTNL10A8MVZ5 291 aa10.39□□□□□ -0.75
SND1-215ENST00000492772 MIF4GDA9UHW6 222 aaKnown RBP10.39□□□□□ -0.75
SND1-215ENST00000492772 H3BMM5 538 aa10.39□□□□□ -0.75
SND1-215ENST00000492772 CDK2AP1O14519 115 aa10.39□□□□□ -0.75
SND1-215ENST00000492772 PRRG2O14669 202 aa10.39□□□□□ -0.75
SND1-215ENST00000492772 PFDN6O15212 129 aa10.39□□□□□ -0.75
SND1-215ENST00000492772 P2RX6O15547 441 aa10.39□□□□□ -0.75
SND1-215ENST00000492772 ASNA1O43681 348 aa10.39□□□□□ -0.75
SND1-215ENST00000492772 WISP2O76076 250 aa10.39□□□□□ -0.75
SND1-215ENST00000492772 NSA2O95478 260 aaKnown RBP10.39□□□□□ -0.75
SND1-215ENST00000492772 CATP04040 527 aaKnown RBP10.39□□□□□ -0.75
SND1-215ENST00000492772 ZNF24P17028 368 aa10.39□□□□□ -0.75
SND1-215ENST00000492772 STIP1P31948 543 aaKnown RBP10.39□□□□□ -0.75
SND1-215ENST00000492772 GRIA1P42261 906 aa10.39□□□□□ -0.75
SND1-215ENST00000492772 CSNK1G2P78368 415 aa10.39□□□□□ -0.75
SND1-215ENST00000492772 ABATP80404 500 aa10.39□□□□□ -0.75
SND1-215ENST00000492772 PRDX1Q06830 199 aaKnown RBP10.39□□□□□ -0.75
SND1-215ENST00000492772 TSTA3Q13630 321 aaPredicted RBP10.39□□□□□ -0.75
SND1-215ENST00000492772 GBX1Q14549 363 aa10.39□□□□□ -0.75
SND1-215ENST00000492772 EEF1AKMT2Q5JPI9 291 aaKnown RBP10.39□□□□□ -0.75
SND1-215ENST00000492772 PCID2Q5JVF3 399 aa10.39□□□□□ -0.75
SND1-215ENST00000492772 CTSL3PQ5NE16 218 aa10.39□□□□□ -0.75
SND1-215ENST00000492772 RNF187Q5TA31 235 aaPredicted RBP10.39□□□□□ -0.75
SND1-215ENST00000492772 FCRLBQ6BAA4 426 aa10.39□□□□□ -0.75
SND1-215ENST00000492772 ADCK2Q7Z695 626 aa10.39□□□□□ -0.75
SND1-215ENST00000492772 CRLF3Q8IUI8 442 aa10.39□□□□□ -0.75
SND1-215ENST00000492772 LGI4Q8N135 537 aa10.39□□□□□ -0.75
SND1-215ENST00000492772 SLC5A8Q8N695 610 aa10.39□□□□□ -0.75
SND1-215ENST00000492772 OTUD6BQ8N6M0 293 aa10.39□□□□□ -0.75
SND1-215ENST00000492772 LRRC57Q8N9N7 239 aa10.39□□□□□ -0.75
SND1-215ENST00000492772 M1APQ8TC57 530 aa10.39□□□□□ -0.75
SND1-215ENST00000492772 POM121Q96HA1 1249 aa10.39□□□□□ -0.75
SND1-215ENST00000492772 PANX2Q96RD6 677 aa10.39□□□□□ -0.75
SND1-215ENST00000492772 DMRTA2Q96SC8 542 aa10.39□□□□□ -0.75
SND1-215ENST00000492772 CYTH2Q99418 400 aa10.39□□□□□ -0.75
SND1-215ENST00000492772 TRIM51Q9BSJ1 452 aa10.39□□□□□ -0.75
SND1-215ENST00000492772 HES7Q9BYE0 225 aa10.39□□□□□ -0.75
SND1-215ENST00000492772 ETNK1Q9HBU6 452 aa10.39□□□□□ -0.75
SND1-215ENST00000492772 MMP25Q9NPA2 562 aa10.39□□□□□ -0.75
SND1-215ENST00000492772 COQ3Q9NZJ6 369 aa10.39□□□□□ -0.75
SND1-215ENST00000492772 GRID2IPA4D2P6 1211 aa10.38□□□□□ -0.75
SND1-215ENST00000492772 GABRR3A8MPY1 467 aa10.38□□□□□ -0.75
SND1-215ENST00000492772 FOXO6A8MYZ6 492 aa10.38□□□□□ -0.75
SND1-215ENST00000492772 HAT1O14929 419 aa10.38□□□□□ -0.75
SND1-215ENST00000492772 KIF5CO60282 957 aa10.38□□□□□ -0.75
SND1-215ENST00000492772 PSIP1O75475 530 aaKnown RBP10.38□□□□□ -0.75
SND1-215ENST00000492772 CD96P40200 585 aa10.38□□□□□ -0.75
SND1-215ENST00000492772 XCR1P46094 333 aa10.38□□□□□ -0.75
SND1-215ENST00000492772 PNLIPRP1P54315 467 aa10.38□□□□□ -0.75
SND1-215ENST00000492772 TAS2R50P59544 299 aa10.38□□□□□ -0.75
SND1-215ENST00000492772 OC90Q02509 493 aaPredicted RBP10.38□□□□□ -0.75
SND1-215ENST00000492772 MRNIPQ6NTE8 343 aa10.38□□□□□ -0.75
SND1-215ENST00000492772 NCCRP1Q6ZVX7 275 aaPredicted RBP10.38□□□□□ -0.75
SND1-215ENST00000492772 PEX26Q7Z412 305 aa10.38□□□□□ -0.75
SND1-215ENST00000492772 GALNTL5Q7Z4T8 443 aa10.38□□□□□ -0.75
SND1-215ENST00000492772 ANKRD37Q7Z713 158 aa10.38□□□□□ -0.75
SND1-215ENST00000492772 PCGF5Q86SE9 256 aa10.38□□□□□ -0.75
SND1-215ENST00000492772 OR9A4Q8NGU2 314 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms