RNA–Protein interactions for RNA: ENST00000492506.1

HDAC3-213, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 830 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-213ENST00000492506 SLC22A11Q9NSA0 550 aa12.62□□□□□ -0.39
HDAC3-213ENST00000492506 GRHL1Q9NZI5 618 aa12.62□□□□□ -0.39
HDAC3-213ENST00000492506 HACD3Q9P035 362 aa12.62□□□□□ -0.39
HDAC3-213ENST00000492506 HEBP2Q9Y5Z4 205 aa12.62□□□□□ -0.39
HDAC3-213ENST00000492506 AP1M2Q9Y6Q5 423 aa12.62□□□□□ -0.39
HDAC3-213ENST00000492506 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.62□□□□□ -0.39
HDAC3-213ENST00000492506 AGAP14A8MT82 685 aa12.61□□□□□ -0.39
HDAC3-213ENST00000492506 E9PBE3 544 aa12.61□□□□□ -0.39
HDAC3-213ENST00000492506 APOL1O14791 398 aa12.61□□□□□ -0.39
HDAC3-213ENST00000492506 GYG2O15488 501 aa12.61□□□□□ -0.39
HDAC3-213ENST00000492506 ENTPD5O75356 428 aa12.61□□□□□ -0.39
HDAC3-213ENST00000492506 OR2B3O76000 313 aa12.61□□□□□ -0.39
HDAC3-213ENST00000492506 STK10O94804 968 aaKnown RBP12.61□□□□□ -0.39
HDAC3-213ENST00000492506 DCDP81605 110 aaKnown RBP12.61□□□□□ -0.39
HDAC3-213ENST00000492506 WASHC5Q12768 1159 aa12.61□□□□□ -0.39
HDAC3-213ENST00000492506 AIMP2Q13155 320 aaKnown RBP12.61□□□□□ -0.39
HDAC3-213ENST00000492506 KRT33BQ14525 404 aa12.61□□□□□ -0.39
HDAC3-213ENST00000492506 SLC9A5Q14940 896 aa12.61□□□□□ -0.39
HDAC3-213ENST00000492506 PRKD1Q15139 912 aaPredicted RBP12.61□□□□□ -0.39
HDAC3-213ENST00000492506 TCEAL1Q15170 157 aa12.61□□□□□ -0.39
HDAC3-213ENST00000492506 SLC1A5Q15758 541 aa12.61□□□□□ -0.39
HDAC3-213ENST00000492506 NDUFA5Q16718 116 aa12.61□□□□□ -0.39
HDAC3-213ENST00000492506 CGB2Q6NT52 195 aa12.61□□□□□ -0.39
HDAC3-213ENST00000492506 ALKBH5Q6P6C2 394 aaKnown RBP12.61□□□□□ -0.39
HDAC3-213ENST00000492506 CENPUQ71F23 418 aa12.61□□□□□ -0.39
HDAC3-213ENST00000492506 GLT6D1Q7Z4J2 308 aa12.61□□□□□ -0.39
HDAC3-213ENST00000492506 PATL1Q86TB9 770 aaKnown RBP12.61□□□□□ -0.39
HDAC3-213ENST00000492506 FJX1Q86VR8 437 aa12.61□□□□□ -0.39
HDAC3-213ENST00000492506 TDRPQ86YL5 185 aa12.61□□□□□ -0.39
HDAC3-213ENST00000492506 RELL1Q8IUW5 271 aa12.61□□□□□ -0.39
HDAC3-213ENST00000492506 GPR135Q8IZ08 494 aa12.61□□□□□ -0.39
HDAC3-213ENST00000492506 SLC25A41Q8N5S1 370 aa12.61□□□□□ -0.39
HDAC3-213ENST00000492506 OR52E1Q8NGJ3 308 aa12.61□□□□□ -0.39
HDAC3-213ENST00000492506 FBXO25Q8TCJ0 367 aa12.61□□□□□ -0.39
HDAC3-213ENST00000492506 PROKR1Q8TCW9 393 aa12.61□□□□□ -0.39
HDAC3-213ENST00000492506 BLOC1S5Q8TDH9 187 aa12.61□□□□□ -0.39
HDAC3-213ENST00000492506 JADE3Q92613 823 aa12.61□□□□□ -0.39
HDAC3-213ENST00000492506 OXNAD1Q96HP4 312 aaPredicted RBP12.61□□□□□ -0.39
HDAC3-213ENST00000492506 BIRC8Q96P09 236 aa12.61□□□□□ -0.39
HDAC3-213ENST00000492506 FERD3LQ96RJ6 166 aa12.61□□□□□ -0.39
HDAC3-213ENST00000492506 SIKE1Q9BRV8 207 aa12.61□□□□□ -0.39
HDAC3-213ENST00000492506 CCM2Q9BSQ5 444 aa12.61□□□□□ -0.39
HDAC3-213ENST00000492506 OR52A5Q9H2C5 316 aa12.61□□□□□ -0.39
HDAC3-213ENST00000492506 ACTR10Q9NZ32 417 aa12.61□□□□□ -0.39
HDAC3-213ENST00000492506 IFT80Q9P2H3 777 aaPredicted RBP12.61□□□□□ -0.39
HDAC3-213ENST00000492506 COPG2Q9UBF2 871 aa12.61□□□□□ -0.39
HDAC3-213ENST00000492506 DHCR7Q9UBM7 475 aaKnown RBP12.61□□□□□ -0.39
HDAC3-213ENST00000492506 GPN3Q9UHW5 284 aaPredicted RBP12.61□□□□□ -0.39
HDAC3-213ENST00000492506 R3HDM2Q9Y2K5 976 aaKnown RBP12.61□□□□□ -0.39
HDAC3-213ENST00000492506 MTO1Q9Y2Z2 717 aaKnown RBP12.61□□□□□ -0.39
HDAC3-213ENST00000492506 A0A1B0GUH1 482 aa12.6□□□□□ -0.39
HDAC3-213ENST00000492506 CCDC78A2IDD5 438 aa12.6□□□□□ -0.39
HDAC3-213ENST00000492506 C2orf74A8MZ97 194 aa12.6□□□□□ -0.39
HDAC3-213ENST00000492506 PEX1O43933 1283 aa12.6□□□□□ -0.39
HDAC3-213ENST00000492506 ALOX12BO75342 701 aa12.6□□□□□ -0.39
HDAC3-213ENST00000492506 PDE5AO76074 875 aa12.6□□□□□ -0.39
HDAC3-213ENST00000492506 PRAMEF1O95521 474 aa12.6□□□□□ -0.39
HDAC3-213ENST00000492506 CD63P08962 238 aa12.6□□□□□ -0.39
HDAC3-213ENST00000492506 TMEM253P0C7T8 217 aa12.6□□□□□ -0.39
HDAC3-213ENST00000492506 T-ENOLP0DO92 83 aa12.6□□□□□ -0.39
HDAC3-213ENST00000492506 PYGMP11217 842 aa12.6□□□□□ -0.39
HDAC3-213ENST00000492506 NFKB1P19838 968 aa12.6□□□□□ -0.39
HDAC3-213ENST00000492506 CTNNA2P26232 953 aa12.6□□□□□ -0.39
HDAC3-213ENST00000492506 GCGRP47871 477 aa12.6□□□□□ -0.39
HDAC3-213ENST00000492506 PRLHRP49683 370 aa12.6□□□□□ -0.39
HDAC3-213ENST00000492506 ART3Q13508 389 aa12.6□□□□□ -0.39
HDAC3-213ENST00000492506 ZNF169Q14929 603 aaPredicted RBP12.6□□□□□ -0.39
HDAC3-213ENST00000492506 BCL2A1Q16548 175 aa12.6□□□□□ -0.39
HDAC3-213ENST00000492506 CYP2A13Q16696 494 aa12.6□□□□□ -0.39
HDAC3-213ENST00000492506 ZXDCQ2QGD7 858 aaPredicted RBP12.6□□□□□ -0.39
HDAC3-213ENST00000492506 ZFYVE27Q5T4F4 411 aa12.6□□□□□ -0.39
HDAC3-213ENST00000492506 SEL1L2Q5TEA6 688 aa12.6□□□□□ -0.39
HDAC3-213ENST00000492506 B3GNTL1Q67FW5 361 aaPredicted RBP12.6□□□□□ -0.39
HDAC3-213ENST00000492506 SPESP1Q6UW49 350 aa12.6□□□□□ -0.39
HDAC3-213ENST00000492506 AMIGO1Q86WK6 493 aa12.6□□□□□ -0.39
HDAC3-213ENST00000492506 SCUBE1Q8IWY4 988 aa12.6□□□□□ -0.39
HDAC3-213ENST00000492506 RHOT2Q8IXI1 618 aa12.6□□□□□ -0.39
HDAC3-213ENST00000492506 ANKRD42Q8N9B4 389 aa12.6□□□□□ -0.39
HDAC3-213ENST00000492506 FLVCR1-AS1Q8TAF5 88 aa12.6□□□□□ -0.39
HDAC3-213ENST00000492506 DNAJB14Q8TBM8 379 aa12.6□□□□□ -0.39
HDAC3-213ENST00000492506 CCDC110Q8TBZ0 833 aa12.6□□□□□ -0.39
HDAC3-213ENST00000492506 HM13Q8TCT9 377 aa12.6□□□□□ -0.39
HDAC3-213ENST00000492506 RELTQ969Z4 430 aa12.6□□□□□ -0.39
HDAC3-213ENST00000492506 LURAP1Q96LR2 239 aa12.6□□□□□ -0.39
HDAC3-213ENST00000492506 TRIM51Q9BSJ1 452 aa12.6□□□□□ -0.39
HDAC3-213ENST00000492506 OSBPL8Q9BZF1 889 aa12.6□□□□□ -0.39
HDAC3-213ENST00000492506 CHRNA10Q9GZZ6 450 aa12.6□□□□□ -0.39
HDAC3-213ENST00000492506 XKR8Q9H6D3 395 aa12.6□□□□□ -0.39
HDAC3-213ENST00000492506 PLGRKTQ9HBL7 147 aa12.6□□□□□ -0.39
HDAC3-213ENST00000492506 SLC6A20Q9NP91 592 aa12.6□□□□□ -0.39
HDAC3-213ENST00000492506 UVRAGQ9P2Y5 699 aa12.6□□□□□ -0.39
HDAC3-213ENST00000492506 NDOR1Q9UHB4 597 aa12.6□□□□□ -0.39
HDAC3-213ENST00000492506 FBXL4Q9UKA2 621 aa12.6□□□□□ -0.39
HDAC3-213ENST00000492506 PKP3Q9Y446 797 aa12.6□□□□□ -0.39
HDAC3-213ENST00000492506 NCOA6Q14686 2063 aaPredicted RBP12.6□□□□□ -0.39
HDAC3-213ENST00000492506 CPAMD8Q8IZJ3 1885 aa12.59□□□□□ -0.39
HDAC3-213ENST00000492506 C17orf113A0A1B0GUU1 675 aa12.59□□□□□ -0.39
HDAC3-213ENST00000492506 HTR3EA5X5Y0 456 aa12.59□□□□□ -0.39
HDAC3-213ENST00000492506 SOCS6O14544 535 aa12.59□□□□□ -0.39
HDAC3-213ENST00000492506 GSC2O15499 205 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms