RNA–Protein interactions for RNA: ENST00000492280.5

HMGN1-220, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 2,707 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-220ENST00000492280 SNX19Q92543 992 aa12.02□□□□□ -0.49
HMGN1-220ENST00000492280 CIDECQ96AQ7 238 aaPredicted RBP12.02□□□□□ -0.49
HMGN1-220ENST00000492280 PREBQ9HCU5 417 aa12.02□□□□□ -0.49
HMGN1-220ENST00000492280 SIRT5Q9NXA8 310 aa12.02□□□□□ -0.49
HMGN1-220ENST00000492280 WARS2Q9UGM6 360 aaKnown RBP12.02□□□□□ -0.49
HMGN1-220ENST00000492280 MAN2B2Q9Y2E5 1009 aa12.02□□□□□ -0.49
HMGN1-220ENST00000492280 TMEM98Q9Y2Y6 226 aa12.02□□□□□ -0.49
HMGN1-220ENST00000492280 KIAA1549LQ6ZVL6 1849 aa12.02□□□□□ -0.49
HMGN1-220ENST00000492280 TRIM64A6NGJ6 449 aa12.02□□□□□ -0.49
HMGN1-220ENST00000492280 TRIM64CA6NLI5 447 aa12.02□□□□□ -0.49
HMGN1-220ENST00000492280 NPC1O15118 1278 aa12.02□□□□□ -0.49
HMGN1-220ENST00000492280 SCAMP1O15126 338 aa12.02□□□□□ -0.49
HMGN1-220ENST00000492280 ATG13O75143 517 aa12.02□□□□□ -0.49
HMGN1-220ENST00000492280 SNRNP200O75643 2136 aaKnown RBP12.02□□□□□ -0.49
HMGN1-220ENST00000492280 EPN2O95208 641 aa12.02□□□□□ -0.49
HMGN1-220ENST00000492280 KCNK5O95279 499 aa12.02□□□□□ -0.49
HMGN1-220ENST00000492280 DGKEP52429 567 aa12.02□□□□□ -0.49
HMGN1-220ENST00000492280 CRYBA2P53672 197 aa12.02□□□□□ -0.49
HMGN1-220ENST00000492280 AP1S2P56377 157 aa12.02□□□□□ -0.49
HMGN1-220ENST00000492280 TCEA2Q15560 299 aa12.02□□□□□ -0.49
HMGN1-220ENST00000492280 DPY19L1Q2PZI1 675 aa12.02□□□□□ -0.49
HMGN1-220ENST00000492280 COX20Q5RI15 118 aa12.02□□□□□ -0.49
HMGN1-220ENST00000492280 C1orf53Q5VUE5 145 aa12.02□□□□□ -0.49
HMGN1-220ENST00000492280 ARHGAP22Q7Z5H3 698 aa12.02□□□□□ -0.49
HMGN1-220ENST00000492280 TECPR1Q7Z6L1 1165 aa12.02□□□□□ -0.49
HMGN1-220ENST00000492280 ZCCHC7Q8N3Z6 543 aaKnown RBP12.02□□□□□ -0.49
HMGN1-220ENST00000492280 TRAM1L1Q8N609 369 aa12.02□□□□□ -0.49
HMGN1-220ENST00000492280 ARL10Q8N8L6 244 aa12.02□□□□□ -0.49
HMGN1-220ENST00000492280 BADQ92934 168 aa12.02□□□□□ -0.49
HMGN1-220ENST00000492280 TESCQ96BS2 214 aa12.02□□□□□ -0.49
HMGN1-220ENST00000492280 FBXL8Q96CD0 374 aa12.02□□□□□ -0.49
HMGN1-220ENST00000492280 REXO5Q96IC2 774 aaKnown RBP12.02□□□□□ -0.49
HMGN1-220ENST00000492280 SH3GL1Q99961 368 aa12.02□□□□□ -0.49
HMGN1-220ENST00000492280 TRIM39Q9HCM9 518 aa12.02□□□□□ -0.49
HMGN1-220ENST00000492280 RASSF1Q9NS23 344 aa12.02□□□□□ -0.49
HMGN1-220ENST00000492280 HEATR5BQ9P2D3 2071 aa12.01□□□□□ -0.49
HMGN1-220ENST00000492280 MYO10Q9HD67 2058 aa12.01□□□□□ -0.49
HMGN1-220ENST00000492280 LOC100130705A0A1B0GUX0 176 aa12.01□□□□□ -0.49
HMGN1-220ENST00000492280 EVPLLA8MZ36 301 aa12.01□□□□□ -0.49
HMGN1-220ENST00000492280 H3BM21 787 aa12.01□□□□□ -0.49
HMGN1-220ENST00000492280 TLL1O43897 1013 aa12.01□□□□□ -0.49
HMGN1-220ENST00000492280 PSIP1O75475 530 aaKnown RBP12.01□□□□□ -0.49
HMGN1-220ENST00000492280 RECQL5O94762 991 aaPredicted RBP12.01□□□□□ -0.49
HMGN1-220ENST00000492280 STATHP02808 62 aa12.01□□□□□ -0.49
HMGN1-220ENST00000492280 ZNF30P17039 623 aa12.01□□□□□ -0.49
HMGN1-220ENST00000492280 LSM3P62310 102 aaKnown RBP12.01□□□□□ -0.49
HMGN1-220ENST00000492280 ABHD18Q0P651 414 aa12.01□□□□□ -0.49
HMGN1-220ENST00000492280 TMED1Q13445 227 aa12.01□□□□□ -0.49
HMGN1-220ENST00000492280 DUOXA1Q1HG43 343 aa12.01□□□□□ -0.49
HMGN1-220ENST00000492280 CPZQ66K79 652 aa12.01□□□□□ -0.49
HMGN1-220ENST00000492280 DCP2Q8IU60 420 aaKnown RBP12.01□□□□□ -0.49
HMGN1-220ENST00000492280 TCAIMQ8N3R3 496 aa12.01□□□□□ -0.49
HMGN1-220ENST00000492280 ZNF555Q8NEP9 628 aa12.01□□□□□ -0.49
HMGN1-220ENST00000492280 WDR48Q8TAF3 677 aa12.01□□□□□ -0.49
HMGN1-220ENST00000492280 TANKQ92844 425 aa12.01□□□□□ -0.49
HMGN1-220ENST00000492280 ARRDC3Q96B67 414 aa12.01□□□□□ -0.49
HMGN1-220ENST00000492280 ZSCAN5AQ9BUG6 496 aa12.01□□□□□ -0.49
HMGN1-220ENST00000492280 DUSP26Q9BV47 211 aa12.01□□□□□ -0.49
HMGN1-220ENST00000492280 TPT1P8Q9HAU6 139 aa12.01□□□□□ -0.49
HMGN1-220ENST00000492280 TM7SF3Q9NS93 570 aa12.01□□□□□ -0.49
HMGN1-220ENST00000492280 BRWD1Q9NSI6 2320 aa12.01□□□□□ -0.49
HMGN1-220ENST00000492280 TMEM45AQ9NWC5 275 aa12.01□□□□□ -0.49
HMGN1-220ENST00000492280 RHBDL2Q9NX52 303 aa12.01□□□□□ -0.49
HMGN1-220ENST00000492280 MRPS23Q9Y3D9 190 aaKnown RBP12.01□□□□□ -0.49
HMGN1-220ENST00000492280 H0YAE9 185 aa12.01□□□□□ -0.49
HMGN1-220ENST00000492280 WNT9AO14904 365 aa12.01□□□□□ -0.49
HMGN1-220ENST00000492280 PCDH7O60245 1069 aa12.01□□□□□ -0.49
HMGN1-220ENST00000492280 INMTO95050 263 aa12.01□□□□□ -0.49
HMGN1-220ENST00000492280 CATP04040 527 aaKnown RBP12.01□□□□□ -0.49
HMGN1-220ENST00000492280 RETP07949 1114 aa12.01□□□□□ -0.49
HMGN1-220ENST00000492280 IGFBP5P24593 272 aa12.01□□□□□ -0.49
HMGN1-220ENST00000492280 WASP42768 502 aa12.01□□□□□ -0.49
HMGN1-220ENST00000492280 OR1E2P47887 323 aa12.01□□□□□ -0.49
HMGN1-220ENST00000492280 PTPN5P54829 565 aa12.01□□□□□ -0.49
HMGN1-220ENST00000492280 CYP4F2P78329 520 aa12.01□□□□□ -0.49
HMGN1-220ENST00000492280 SP140Q13342 867 aa12.01□□□□□ -0.49
HMGN1-220ENST00000492280 SLBPQ14493 270 aaKnown RBP eCLIP12.01□□□□□ -0.49
HMGN1-220ENST00000492280 VMACQ2NL98 169 aa12.01□□□□□ -0.49
HMGN1-220ENST00000492280 ZNF773Q6PK81 442 aa12.01□□□□□ -0.49
HMGN1-220ENST00000492280 ADHFE1Q8IWW8 467 aa12.01□□□□□ -0.49
HMGN1-220ENST00000492280 OR52J3Q8NH60 311 aa12.01□□□□□ -0.49
HMGN1-220ENST00000492280 CLP1Q92989 425 aaKnown RBP12.01□□□□□ -0.49
HMGN1-220ENST00000492280 ABTB1Q969K4 478 aaPredicted RBP12.01□□□□□ -0.49
HMGN1-220ENST00000492280 CSF3RQ99062 836 aa12.01□□□□□ -0.49
HMGN1-220ENST00000492280 FZD4Q9ULV1 537 aa12.01□□□□□ -0.49
HMGN1-220ENST00000492280 EXO1Q9UQ84 846 aaKnown RBP12.01□□□□□ -0.49
HMGN1-220ENST00000492280 SLC5A10A0PJK1 596 aa12□□□□□ -0.49
HMGN1-220ENST00000492280 GRXCR1A8MXD5 290 aa12□□□□□ -0.49
HMGN1-220ENST00000492280 BCKDKO14874 412 aa12□□□□□ -0.49
HMGN1-220ENST00000492280 C7P10643 843 aa12□□□□□ -0.49
HMGN1-220ENST00000492280 ADH5P11766 374 aa12□□□□□ -0.49
HMGN1-220ENST00000492280 MAPK1P28482 360 aa12□□□□□ -0.49
HMGN1-220ENST00000492280 MAP2K4P45985 399 aa12□□□□□ -0.49
HMGN1-220ENST00000492280 PRLHRP49683 370 aa12□□□□□ -0.49
HMGN1-220ENST00000492280 DAPP51397 102 aa12□□□□□ -0.49
HMGN1-220ENST00000492280 MLLT10P55197 1068 aa12□□□□□ -0.49
HMGN1-220ENST00000492280 CREMQ03060 361 aa12□□□□□ -0.49
HMGN1-220ENST00000492280 FNDC3BQ53EP0 1204 aaKnown RBP12□□□□□ -0.49
HMGN1-220ENST00000492280 C6orf141Q5SZD1 244 aa12□□□□□ -0.49
HMGN1-220ENST00000492280 CCDC81Q6ZN84 652 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms