RNA–Protein interactions for RNA: ENST00000491867.5

ATG4B-222, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 435 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-222ENST00000491867 TFR2Q9UP52 801 aa13.07□□□□□ -0.32
ATG4B-222ENST00000491867 USP27XA6NNY8 438 aa13.06□□□□□ -0.32
ATG4B-222ENST00000491867 PJA2O43164 708 aa13.06□□□□□ -0.32
ATG4B-222ENST00000491867 STK10O94804 968 aaKnown RBP13.06□□□□□ -0.32
ATG4B-222ENST00000491867 FKBP9O95302 570 aa13.06□□□□□ -0.32
ATG4B-222ENST00000491867 ANXA5P08758 320 aa13.06□□□□□ -0.32
ATG4B-222ENST00000491867 PSMB5P28074 263 aa13.06□□□□□ -0.32
ATG4B-222ENST00000491867 CTNNA1P35221 906 aaKnown RBP13.06□□□□□ -0.32
ATG4B-222ENST00000491867 PLOD1Q02809 727 aaPredicted RBP13.06□□□□□ -0.32
ATG4B-222ENST00000491867 TBX2Q13207 712 aaPredicted RBP13.06□□□□□ -0.32
ATG4B-222ENST00000491867 PRPSAP1Q14558 356 aa13.06□□□□□ -0.32
ATG4B-222ENST00000491867 DENND5AQ6IQ26 1287 aa13.06□□□□□ -0.32
ATG4B-222ENST00000491867 RNF44Q7L0R7 432 aa13.06□□□□□ -0.32
ATG4B-222ENST00000491867 CPEB2Q7Z5Q1 589 aaKnown RBP13.06□□□□□ -0.32
ATG4B-222ENST00000491867 CAMKMTQ7Z624 323 aa13.06□□□□□ -0.32
ATG4B-222ENST00000491867 DCUN1D3Q8IWE4 304 aa13.06□□□□□ -0.32
ATG4B-222ENST00000491867 ACRBPQ8NEB7 543 aa13.06□□□□□ -0.32
ATG4B-222ENST00000491867 METTL21AQ8WXB1 218 aa13.06□□□□□ -0.32
ATG4B-222ENST00000491867 MVB12AQ96EY5 273 aa13.06□□□□□ -0.32
ATG4B-222ENST00000491867 SPATA13Q96N96 652 aa13.06□□□□□ -0.32
ATG4B-222ENST00000491867 TBL1YQ9BQ87 522 aa13.06□□□□□ -0.32
ATG4B-222ENST00000491867 VN1R1Q9GZP7 353 aa13.06□□□□□ -0.32
ATG4B-222ENST00000491867 TP63Q9H3D4 680 aaPredicted RBP13.06□□□□□ -0.32
ATG4B-222ENST00000491867 ARNT2Q9HBZ2 717 aa13.06□□□□□ -0.32
ATG4B-222ENST00000491867 RASSF1Q9NS23 344 aa13.06□□□□□ -0.32
ATG4B-222ENST00000491867 EFR3BQ9Y2G0 817 aa13.06□□□□□ -0.32
ATG4B-222ENST00000491867 KLK4Q9Y5K2 254 aa13.06□□□□□ -0.32
ATG4B-222ENST00000491867 PHF3Q92576 2039 aaKnown RBP13.06□□□□□ -0.32
ATG4B-222ENST00000491867 H0YGG7 62 aa13.05□□□□□ -0.32
ATG4B-222ENST00000491867 TFECO14948 347 aaPredicted RBP13.05□□□□□ -0.32
ATG4B-222ENST00000491867 CDC40O60508 579 aaKnown RBP eCLIP13.05□□□□□ -0.32
ATG4B-222ENST00000491867 SLC25A12O75746 678 aa13.05□□□□□ -0.32
ATG4B-222ENST00000491867 RPN2P04844 631 aa13.05□□□□□ -0.32
ATG4B-222ENST00000491867 RBP3P10745 1247 aa13.05□□□□□ -0.32
ATG4B-222ENST00000491867 CTNNA2P26232 953 aa13.05□□□□□ -0.32
ATG4B-222ENST00000491867 PCSK6P29122 969 aa13.05□□□□□ -0.32
ATG4B-222ENST00000491867 PTPN7P35236 360 aa13.05□□□□□ -0.32
ATG4B-222ENST00000491867 EMP3P54852 163 aa13.05□□□□□ -0.32
ATG4B-222ENST00000491867 NUP107P57740 925 aa13.05□□□□□ -0.32
ATG4B-222ENST00000491867 EIF3EP60228 445 aaKnown RBP13.05□□□□□ -0.32
ATG4B-222ENST00000491867 ARF3P61204 181 aaPredicted RBP13.05□□□□□ -0.32
ATG4B-222ENST00000491867 MAT1AQ00266 395 aaKnown RBP13.05□□□□□ -0.32
ATG4B-222ENST00000491867 UNC5DQ6UXZ4 953 aa13.05□□□□□ -0.32
ATG4B-222ENST00000491867 CDC20BQ86Y33 519 aa13.05□□□□□ -0.32
ATG4B-222ENST00000491867 VRK3Q8IV63 474 aa13.05□□□□□ -0.32
ATG4B-222ENST00000491867 MYRIPQ8NFW9 859 aa13.05□□□□□ -0.32
ATG4B-222ENST00000491867 GOT1L1Q8NHS2 421 aaPredicted RBP13.05□□□□□ -0.32
ATG4B-222ENST00000491867 PPP1R2P1Q96PQ5 205 aa13.05□□□□□ -0.32
ATG4B-222ENST00000491867 CYTH2Q99418 400 aa13.05□□□□□ -0.32
ATG4B-222ENST00000491867 FAM118BQ9BPY3 351 aa13.05□□□□□ -0.32
ATG4B-222ENST00000491867 FEZ2Q9UHY8 353 aaPredicted RBP13.05□□□□□ -0.32
ATG4B-222ENST00000491867 SLC39A10Q9ULF5 831 aa13.05□□□□□ -0.32
ATG4B-222ENST00000491867 RUVBL1Q9Y265 456 aaKnown RBP13.05□□□□□ -0.32
ATG4B-222ENST00000491867 PCDHA13Q9Y5I0 950 aa13.05□□□□□ -0.32
ATG4B-222ENST00000491867 A0A0A6YYC8 382 aaPredicted RBP13.04□□□□□ -0.32
ATG4B-222ENST00000491867 H7C0S8 307 aa13.04□□□□□ -0.32
ATG4B-222ENST00000491867 I3L1I5 382 aaPredicted RBP13.04□□□□□ -0.32
ATG4B-222ENST00000491867 QSOX1O00391 747 aa13.04□□□□□ -0.32
ATG4B-222ENST00000491867 NME2P1O60361 137 aa13.04□□□□□ -0.32
ATG4B-222ENST00000491867 LY6G6DO95868 133 aa13.04□□□□□ -0.32
ATG4B-222ENST00000491867 PTMSP20962 102 aa13.04□□□□□ -0.32
ATG4B-222ENST00000491867 NME2P22392 152 aa13.04□□□□□ -0.32
ATG4B-222ENST00000491867 RFC3P40938 356 aa13.04□□□□□ -0.32
ATG4B-222ENST00000491867 SNTB1Q13884 538 aaKnown RBP13.04□□□□□ -0.32
ATG4B-222ENST00000491867 SPARCL1Q14515 664 aa13.04□□□□□ -0.32
ATG4B-222ENST00000491867 HKDC1Q2TB90 917 aa13.04□□□□□ -0.32
ATG4B-222ENST00000491867 DEFB113Q30KQ7 82 aa13.04□□□□□ -0.32
ATG4B-222ENST00000491867 ZNF468Q5VIY5 522 aaPredicted RBP13.04□□□□□ -0.32
ATG4B-222ENST00000491867 FBXO42Q6P3S6 717 aa13.04□□□□□ -0.32
ATG4B-222ENST00000491867 DARS2Q6PI48 645 aaKnown RBP13.04□□□□□ -0.32
ATG4B-222ENST00000491867 ARSKQ6UWY0 536 aa13.04□□□□□ -0.32
ATG4B-222ENST00000491867 KLHDC8BQ8IXV7 354 aa13.04□□□□□ -0.32
ATG4B-222ENST00000491867 SLC22A15Q8IZD6 547 aa13.04□□□□□ -0.32
ATG4B-222ENST00000491867 SLC5A8Q8N695 610 aa13.04□□□□□ -0.32
ATG4B-222ENST00000491867 CSNK1A1LQ8N752 337 aa13.04□□□□□ -0.32
ATG4B-222ENST00000491867 TC2NQ8N9U0 490 aa13.04□□□□□ -0.32
ATG4B-222ENST00000491867 OR2L3Q8NG85 312 aa13.04□□□□□ -0.32
ATG4B-222ENST00000491867 ZFYVE21Q9BQ24 234 aa13.04□□□□□ -0.32
ATG4B-222ENST00000491867 OSBPL8Q9BZF1 889 aa13.04□□□□□ -0.32
ATG4B-222ENST00000491867 PCDHA3Q9Y5H8 950 aa13.04□□□□□ -0.32
ATG4B-222ENST00000491867 HEATR5BQ9P2D3 2071 aa13.03□□□□□ -0.32
ATG4B-222ENST00000491867 FOXS1O43638 330 aa13.03□□□□□ -0.32
ATG4B-222ENST00000491867 PRMT3O60678 531 aa13.03□□□□□ -0.32
ATG4B-222ENST00000491867 HOXC12P31275 282 aa13.03□□□□□ -0.32
ATG4B-222ENST00000491867 YBX1P67809 324 aaKnown RBP13.03□□□□□ -0.32
ATG4B-222ENST00000491867 HSPA14Q0VDF9 509 aa13.03□□□□□ -0.32
ATG4B-222ENST00000491867 SPA17Q15506 151 aa13.03□□□□□ -0.32
ATG4B-222ENST00000491867 MINDY4Q4G0A6 757 aa13.03□□□□□ -0.32
ATG4B-222ENST00000491867 EMC4Q5J8M3 183 aa13.03□□□□□ -0.32
ATG4B-222ENST00000491867 MFSD4BQ5TF39 518 aa13.03□□□□□ -0.32
ATG4B-222ENST00000491867 LRRC8BQ6P9F7 803 aa13.03□□□□□ -0.32
ATG4B-222ENST00000491867 PAMR1Q6UXH9 720 aa13.03□□□□□ -0.32
ATG4B-222ENST00000491867 PACS1Q6VY07 963 aa13.03□□□□□ -0.32
ATG4B-222ENST00000491867 ACAD11Q709F0 780 aa13.03□□□□□ -0.32
ATG4B-222ENST00000491867 CCDC170Q8IYT3 715 aa13.03□□□□□ -0.32
ATG4B-222ENST00000491867 RNF214Q8ND24 703 aa13.03□□□□□ -0.32
ATG4B-222ENST00000491867 LRRC45Q96CN5 670 aa13.03□□□□□ -0.32
ATG4B-222ENST00000491867 DPH7Q9BTV6 452 aa13.03□□□□□ -0.32
ATG4B-222ENST00000491867 DRC3Q9H069 523 aa13.03□□□□□ -0.32
ATG4B-222ENST00000491867 TSPY26PQ9H489 355 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms