RNA–Protein interactions for RNA: ENST00000491685.5

TMEM39A-211, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 852 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-211ENST00000491685 TLDC2A0PJX2 215 aa10.56□□□□□ -0.72
TMEM39A-211ENST00000491685 ISM1B1AKI9 464 aa10.56□□□□□ -0.72
TMEM39A-211ENST00000491685 GFYI3L273 518 aa10.56□□□□□ -0.72
TMEM39A-211ENST00000491685 RASGRF2O14827 1237 aa10.56□□□□□ -0.72
TMEM39A-211ENST00000491685 PSIP1O75475 530 aaKnown RBP10.56□□□□□ -0.72
TMEM39A-211ENST00000491685 F7P08709 466 aaPredicted RBP10.56□□□□□ -0.72
TMEM39A-211ENST00000491685 ENO2P09104 434 aaPredicted RBP10.56□□□□□ -0.72
TMEM39A-211ENST00000491685 NUDT17P0C025 328 aa10.56□□□□□ -0.72
TMEM39A-211ENST00000491685 CCDC166P0CW27 439 aa10.56□□□□□ -0.72
TMEM39A-211ENST00000491685 COL6A2P12110 1019 aa10.56□□□□□ -0.72
TMEM39A-211ENST00000491685 ITGAXP20702 1163 aa10.56□□□□□ -0.72
TMEM39A-211ENST00000491685 PKLRP30613 574 aa10.56□□□□□ -0.72
TMEM39A-211ENST00000491685 SERPINB8P50452 374 aa10.56□□□□□ -0.72
TMEM39A-211ENST00000491685 SP140Q13342 867 aa10.56□□□□□ -0.72
TMEM39A-211ENST00000491685 GRB7Q14451 532 aa10.56□□□□□ -0.72
TMEM39A-211ENST00000491685 FAM83EQ2M2I3 478 aa10.56□□□□□ -0.72
TMEM39A-211ENST00000491685 MLIPQ5VWP3 458 aa10.56□□□□□ -0.72
TMEM39A-211ENST00000491685 SLC6A19Q695T7 634 aa10.56□□□□□ -0.72
TMEM39A-211ENST00000491685 JMJD6Q6NYC1 403 aaPredicted RBP10.56□□□□□ -0.72
TMEM39A-211ENST00000491685 LRIG3Q6UXM1 1119 aa10.56□□□□□ -0.72
TMEM39A-211ENST00000491685 MTERF4Q7Z6M4 381 aaKnown RBP10.56□□□□□ -0.72
TMEM39A-211ENST00000491685 TAX1BP1Q86VP1 789 aa10.56□□□□□ -0.72
TMEM39A-211ENST00000491685 RIBC1Q8N443 379 aaPredicted RBP10.56□□□□□ -0.72
TMEM39A-211ENST00000491685 DNAJC22Q8N4W6 341 aa10.56□□□□□ -0.72
TMEM39A-211ENST00000491685 C2orf73Q8N5S3 287 aaPredicted RBP10.56□□□□□ -0.72
TMEM39A-211ENST00000491685 ZNF655Q8N720 491 aaPredicted RBP10.56□□□□□ -0.72
TMEM39A-211ENST00000491685 EFCAB3Q8N7B9 438 aa10.56□□□□□ -0.72
TMEM39A-211ENST00000491685 FBXO15Q8NCQ5 510 aaPredicted RBP10.56□□□□□ -0.72
TMEM39A-211ENST00000491685 IL17FQ96PD4 163 aa10.56□□□□□ -0.72
TMEM39A-211ENST00000491685 OLFM1Q99784 485 aa10.56□□□□□ -0.72
TMEM39A-211ENST00000491685 MCMBPQ9BTE3 642 aa10.56□□□□□ -0.72
TMEM39A-211ENST00000491685 TMEM109Q9BVC6 243 aa10.56□□□□□ -0.72
TMEM39A-211ENST00000491685 DERL2Q9GZP9 239 aa10.56□□□□□ -0.72
TMEM39A-211ENST00000491685 SLC22A11Q9NSA0 550 aa10.56□□□□□ -0.72
TMEM39A-211ENST00000491685 UTP6Q9NYH9 597 aaKnown RBP10.56□□□□□ -0.72
TMEM39A-211ENST00000491685 PSMC3IPQ9P2W1 217 aaPredicted RBP10.56□□□□□ -0.72
TMEM39A-211ENST00000491685 NOVA2Q9UNW9 492 aaKnown RBP10.56□□□□□ -0.72
TMEM39A-211ENST00000491685 RUVBL2Q9Y230 463 aaKnown RBP10.56□□□□□ -0.72
TMEM39A-211ENST00000491685 AP1M2Q9Y6Q5 423 aa10.56□□□□□ -0.72
TMEM39A-211ENST00000491685 CACNA1DQ01668 2161 aa10.56□□□□□ -0.72
TMEM39A-211ENST00000491685 CENPEQ02224 2701 aa10.56□□□□□ -0.72
TMEM39A-211ENST00000491685 CRYBG3Q68DQ2 2970 aa10.55□□□□□ -0.72
TMEM39A-211ENST00000491685 A0A096LPK6 155 aa10.55□□□□□ -0.72
TMEM39A-211ENST00000491685 ZSCAN9O15535 394 aaPredicted RBP10.55□□□□□ -0.72
TMEM39A-211ENST00000491685 CDH16O75309 829 aa10.55□□□□□ -0.72
TMEM39A-211ENST00000491685 SEMA7AO75326 666 aa10.55□□□□□ -0.72
TMEM39A-211ENST00000491685 VPS4BO75351 444 aa10.55□□□□□ -0.72
TMEM39A-211ENST00000491685 FKBP9O95302 570 aa10.55□□□□□ -0.72
TMEM39A-211ENST00000491685 C1QAP02745 245 aa10.55□□□□□ -0.72
TMEM39A-211ENST00000491685 S100BP04271 92 aaPredicted RBP10.55□□□□□ -0.72
TMEM39A-211ENST00000491685 C2P06681 752 aa10.55□□□□□ -0.72
TMEM39A-211ENST00000491685 UMODP07911 640 aa10.55□□□□□ -0.72
TMEM39A-211ENST00000491685 ANXA5P08758 320 aa10.55□□□□□ -0.72
TMEM39A-211ENST00000491685 RBP1P09455 135 aa10.55□□□□□ -0.72
TMEM39A-211ENST00000491685 LTA4HP09960 611 aaKnown RBP10.55□□□□□ -0.72
TMEM39A-211ENST00000491685 ZNF37AP17032 561 aaPredicted RBP10.55□□□□□ -0.72
TMEM39A-211ENST00000491685 KRT15P19012 456 aa10.55□□□□□ -0.72
TMEM39A-211ENST00000491685 MAGP20916 626 aa10.55□□□□□ -0.72
TMEM39A-211ENST00000491685 GCGRP47871 477 aa10.55□□□□□ -0.72
TMEM39A-211ENST00000491685 RAB28P51157 221 aa10.55□□□□□ -0.72
TMEM39A-211ENST00000491685 AP1S2P56377 157 aa10.55□□□□□ -0.72
TMEM39A-211ENST00000491685 MRPL49Q13405 166 aaKnown RBP10.55□□□□□ -0.72
TMEM39A-211ENST00000491685 CSHL1Q14406 222 aa10.55□□□□□ -0.72
TMEM39A-211ENST00000491685 ACAP2Q15057 778 aa10.55□□□□□ -0.72
TMEM39A-211ENST00000491685 INPP5JQ15735 1006 aaPredicted RBP10.55□□□□□ -0.72
TMEM39A-211ENST00000491685 RHBDD2Q6NTF9 364 aa10.55□□□□□ -0.72
TMEM39A-211ENST00000491685 TIFABQ6ZNK6 161 aa10.55□□□□□ -0.72
TMEM39A-211ENST00000491685 FRA10AC1Q70Z53 315 aa10.55□□□□□ -0.72
TMEM39A-211ENST00000491685 PPP1R32Q7Z5V6 425 aa10.55□□□□□ -0.72
TMEM39A-211ENST00000491685 TDRPQ86YL5 185 aa10.55□□□□□ -0.72
TMEM39A-211ENST00000491685 RAB43Q86YS6 212 aa10.55□□□□□ -0.72
TMEM39A-211ENST00000491685 CEP97Q8IW35 865 aa10.55□□□□□ -0.72
TMEM39A-211ENST00000491685 DTWD1Q8N5C7 304 aa10.55□□□□□ -0.72
TMEM39A-211ENST00000491685 GALNT11Q8NCW6 608 aa10.55□□□□□ -0.72
TMEM39A-211ENST00000491685 DCAKDQ8WVC6 231 aa10.55□□□□□ -0.72
TMEM39A-211ENST00000491685 TCTN2Q96GX1 697 aa10.55□□□□□ -0.72
TMEM39A-211ENST00000491685 SLC30A3Q99726 388 aa10.55□□□□□ -0.72
TMEM39A-211ENST00000491685 VPS11Q9H270 941 aa10.55□□□□□ -0.72
TMEM39A-211ENST00000491685 CAB39LQ9H9S4 337 aa10.55□□□□□ -0.72
TMEM39A-211ENST00000491685 GPR83Q9NYM4 423 aa10.55□□□□□ -0.72
TMEM39A-211ENST00000491685 SPATA7Q9P0W8 599 aa10.55□□□□□ -0.72
TMEM39A-211ENST00000491685 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.55□□□□□ -0.72
TMEM39A-211ENST00000491685 DCDC2Q9UHG0 476 aa10.55□□□□□ -0.72
TMEM39A-211ENST00000491685 TSR3Q9UJK0 312 aaKnown RBP10.55□□□□□ -0.72
TMEM39A-211ENST00000491685 VPS4AQ9UN37 437 aa10.55□□□□□ -0.72
TMEM39A-211ENST00000491685 SRPK3Q9UPE1 567 aa10.55□□□□□ -0.72
TMEM39A-211ENST00000491685 MED16Q9Y2X0 877 aa10.55□□□□□ -0.72
TMEM39A-211ENST00000491685 PTRH2Q9Y3E5 179 aaKnown RBP10.55□□□□□ -0.72
TMEM39A-211ENST00000491685 ZNF451Q9Y4E5 1061 aa10.55□□□□□ -0.72
TMEM39A-211ENST00000491685 NFS1Q9Y697 457 aa10.55□□□□□ -0.72
TMEM39A-211ENST00000491685 HIVEP3Q5T1R4 2406 aa10.55□□□□□ -0.72
TMEM39A-211ENST00000491685 PRRC2CQ9Y520 2896 aaKnown RBP10.55□□□□□ -0.72
TMEM39A-211ENST00000491685 ESPL1Q14674 2120 aa10.54□□□□□ -0.72
TMEM39A-211ENST00000491685 SYCE1LA8MT33 242 aa10.54□□□□□ -0.72
TMEM39A-211ENST00000491685 TCP11X1B4DZS4 312 aa10.54□□□□□ -0.72
TMEM39A-211ENST00000491685 TRIM49D1C9J1S8 452 aa10.54□□□□□ -0.72
TMEM39A-211ENST00000491685 PHGDHO43175 533 aaKnown RBP10.54□□□□□ -0.72
TMEM39A-211ENST00000491685 NRP2O60462 931 aa10.54□□□□□ -0.72
TMEM39A-211ENST00000491685 ALOX12BO75342 701 aa10.54□□□□□ -0.72
TMEM39A-211ENST00000491685 CCND1P24385 295 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms