RNA–Protein interactions for RNA: ENST00000491668.1

SEC61A1-206, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 4

Gene SEC61A1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-206ENST00000491668 PRTGQ2VWP7 1150 aa12.12□□□□□ -0.47
SEC61A1-206ENST00000491668 ZC3H12BQ5HYM0 836 aaKnown RBP12.12□□□□□ -0.47
SEC61A1-206ENST00000491668 DCAF10Q5QP82 559 aa12.12□□□□□ -0.47
SEC61A1-206ENST00000491668 MROH9Q5TGP6 573 aa12.12□□□□□ -0.47
SEC61A1-206ENST00000491668 ZNF425Q6IV72 752 aa12.12□□□□□ -0.47
SEC61A1-206ENST00000491668 CLEC18BQ6UXF7 455 aa12.12□□□□□ -0.47
SEC61A1-206ENST00000491668 NEK10Q6ZWH5 1172 aa12.12□□□□□ -0.47
SEC61A1-206ENST00000491668 RAPH1Q70E73 1250 aa12.12□□□□□ -0.47
SEC61A1-206ENST00000491668 OVCH1Q7RTY7 1134 aa12.12□□□□□ -0.47
SEC61A1-206ENST00000491668 PIWIL4Q7Z3Z4 852 aaKnown RBP12.12□□□□□ -0.47
SEC61A1-206ENST00000491668 RAB43Q86YS6 212 aa12.12□□□□□ -0.47
SEC61A1-206ENST00000491668 CPNE9Q8IYJ1 553 aa12.12□□□□□ -0.47
SEC61A1-206ENST00000491668 METTL27Q8N6F8 245 aaPredicted RBP12.12□□□□□ -0.47
SEC61A1-206ENST00000491668 RBMXL3Q8N7X1 1067 aaKnown RBP12.12□□□□□ -0.47
SEC61A1-206ENST00000491668 Q8NA96 180 aa12.12□□□□□ -0.47
SEC61A1-206ENST00000491668 CLEC18CQ8NCF0 446 aa12.12□□□□□ -0.47
SEC61A1-206ENST00000491668 FBXO15Q8NCQ5 510 aaPredicted RBP12.12□□□□□ -0.47
SEC61A1-206ENST00000491668 PPFIBP2Q8ND30 876 aa12.12□□□□□ -0.47
SEC61A1-206ENST00000491668 MAGEC3Q8TD91 643 aa12.12□□□□□ -0.47
SEC61A1-206ENST00000491668 SMPDL3AQ92484 453 aa12.12□□□□□ -0.47
SEC61A1-206ENST00000491668 INPP5DQ92835 1189 aa12.12□□□□□ -0.47
SEC61A1-206ENST00000491668 PTERQ96BW5 349 aa12.12□□□□□ -0.47
SEC61A1-206ENST00000491668 SPSB2Q99619 263 aa12.12□□□□□ -0.47
SEC61A1-206ENST00000491668 C17orf62Q9BQA9 187 aa12.12□□□□□ -0.47
SEC61A1-206ENST00000491668 DPH7Q9BTV6 452 aa12.12□□□□□ -0.47
SEC61A1-206ENST00000491668 SLC26A1Q9H2B4 701 aa12.12□□□□□ -0.47
SEC61A1-206ENST00000491668 EPB41L4BQ9H329 900 aa12.12□□□□□ -0.47
SEC61A1-206ENST00000491668 P4HTMQ9NXG6 502 aa12.12□□□□□ -0.47
SEC61A1-206ENST00000491668 PSMC3IPQ9P2W1 217 aaPredicted RBP12.12□□□□□ -0.47
SEC61A1-206ENST00000491668 GPN3Q9UHW5 284 aaPredicted RBP12.12□□□□□ -0.47
SEC61A1-206ENST00000491668 MTO1Q9Y2Z2 717 aaKnown RBP12.12□□□□□ -0.47
SEC61A1-206ENST00000491668 DHRS7Q9Y394 339 aa12.12□□□□□ -0.47
SEC61A1-206ENST00000491668 SHANK1Q9Y566 2161 aa12.12□□□□□ -0.47
SEC61A1-206ENST00000491668 NAV2Q8IVL1 2488 aa12.12□□□□□ -0.47
SEC61A1-206ENST00000491668 IQANK1A0A1B0GTG1 560 aa12.11□□□□□ -0.47
SEC61A1-206ENST00000491668 HYKKA2RU49 373 aa12.11□□□□□ -0.47
SEC61A1-206ENST00000491668 VSTM2BA6NLU5 285 aa12.11□□□□□ -0.47
SEC61A1-206ENST00000491668 E7ENX8 843 aa12.11□□□□□ -0.47
SEC61A1-206ENST00000491668 SRPX2O60687 465 aaPredicted RBP12.11□□□□□ -0.47
SEC61A1-206ENST00000491668 CNTFP26441 200 aa12.11□□□□□ -0.47
SEC61A1-206ENST00000491668 SLCO1A2P46721 670 aa12.11□□□□□ -0.47
SEC61A1-206ENST00000491668 RGS4P49798 205 aa12.11□□□□□ -0.47
SEC61A1-206ENST00000491668 PGGT1BP53609 377 aa12.11□□□□□ -0.47
SEC61A1-206ENST00000491668 PNLIPRP1P54315 467 aa12.11□□□□□ -0.47
SEC61A1-206ENST00000491668 ARSFP54793 590 aa12.11□□□□□ -0.47
SEC61A1-206ENST00000491668 CDKN2DP55273 166 aa12.11□□□□□ -0.47
SEC61A1-206ENST00000491668 TAP2Q03519 686 aa12.11□□□□□ -0.47
SEC61A1-206ENST00000491668 BMPR2Q13873 1038 aa12.11□□□□□ -0.47
SEC61A1-206ENST00000491668 ARHGAP19Q14CB8 494 aa12.11□□□□□ -0.47
SEC61A1-206ENST00000491668 TCTE1Q5JU00 501 aa12.11□□□□□ -0.47
SEC61A1-206ENST00000491668 YOD1Q5VVQ6 348 aaPredicted RBP12.11□□□□□ -0.47
SEC61A1-206ENST00000491668 PAQR7Q86WK9 346 aa12.11□□□□□ -0.47
SEC61A1-206ENST00000491668 CNPY4Q8N129 248 aa12.11□□□□□ -0.47
SEC61A1-206ENST00000491668 ARHGEF39Q8N4T4 335 aa12.11□□□□□ -0.47
SEC61A1-206ENST00000491668 OR2W6PQ8NHA6 318 aa12.11□□□□□ -0.47
SEC61A1-206ENST00000491668 FKBP10Q96AY3 582 aa12.11□□□□□ -0.47
SEC61A1-206ENST00000491668 C10orf90Q96M02 699 aa12.11□□□□□ -0.47
SEC61A1-206ENST00000491668 GPR22Q99680 433 aa12.11□□□□□ -0.47
SEC61A1-206ENST00000491668 SMAD5Q99717 465 aaKnown RBP12.11□□□□□ -0.47
SEC61A1-206ENST00000491668 PLCD4Q9BRC7 762 aa12.11□□□□□ -0.47
SEC61A1-206ENST00000491668 WDR54Q9H977 334 aa12.11□□□□□ -0.47
SEC61A1-206ENST00000491668 FETUBQ9UGM5 382 aa12.11□□□□□ -0.47
SEC61A1-206ENST00000491668 NDOR1Q9UHB4 597 aa12.11□□□□□ -0.47
SEC61A1-206ENST00000491668 TBK1Q9UHD2 729 aa12.11□□□□□ -0.47
SEC61A1-206ENST00000491668 TAC3Q9UHF0 121 aa12.11□□□□□ -0.47
SEC61A1-206ENST00000491668 ZNF180Q9UJW8 692 aa12.11□□□□□ -0.47
SEC61A1-206ENST00000491668 ADAMTS6Q9UKP5 1117 aa12.11□□□□□ -0.47
SEC61A1-206ENST00000491668 MDC1Q14676 2089 aaKnown RBP12.1□□□□□ -0.47
SEC61A1-206ENST00000491668 NUP210LQ5VU65 1888 aa12.1□□□□□ -0.47
SEC61A1-206ENST00000491668 H0YGG7 62 aa12.1□□□□□ -0.47
SEC61A1-206ENST00000491668 SOCS6O14544 535 aa12.1□□□□□ -0.47
SEC61A1-206ENST00000491668 ALOX12BO75342 701 aa12.1□□□□□ -0.47
SEC61A1-206ENST00000491668 CATP04040 527 aaKnown RBP12.1□□□□□ -0.47
SEC61A1-206ENST00000491668 SNRPAP09012 282 aaKnown RBP12.1□□□□□ -0.47
SEC61A1-206ENST00000491668 NUDT17P0C025 328 aa12.1□□□□□ -0.47
SEC61A1-206ENST00000491668 MPC1LP0DKB6 136 aa12.1□□□□□ -0.47
SEC61A1-206ENST00000491668 TYK2P29597 1187 aa12.1□□□□□ -0.47
SEC61A1-206ENST00000491668 SERPINB8P50452 374 aa12.1□□□□□ -0.47
SEC61A1-206ENST00000491668 RRADP55042 308 aa12.1□□□□□ -0.47
SEC61A1-206ENST00000491668 SOX8P57073 446 aa12.1□□□□□ -0.47
SEC61A1-206ENST00000491668 TAS2R39P59534 338 aa12.1□□□□□ -0.47
SEC61A1-206ENST00000491668 IL2P60568 153 aa12.1□□□□□ -0.47
SEC61A1-206ENST00000491668 ARF3P61204 181 aaPredicted RBP12.1□□□□□ -0.47
SEC61A1-206ENST00000491668 PRDX1Q06830 199 aaKnown RBP12.1□□□□□ -0.47
SEC61A1-206ENST00000491668 ZXDCQ2QGD7 858 aaPredicted RBP12.1□□□□□ -0.47
SEC61A1-206ENST00000491668 PRR30Q53SZ7 412 aaPredicted RBP12.1□□□□□ -0.47
SEC61A1-206ENST00000491668 BEND6Q5SZJ8 279 aaPredicted RBP12.1□□□□□ -0.47
SEC61A1-206ENST00000491668 ICE2Q659A1 982 aa12.1□□□□□ -0.47
SEC61A1-206ENST00000491668 JMJD6Q6NYC1 403 aaPredicted RBP12.1□□□□□ -0.47
SEC61A1-206ENST00000491668 ADGRD1Q6QNK2 874 aa12.1□□□□□ -0.47
SEC61A1-206ENST00000491668 KIRREL2Q6UWL6 708 aa12.1□□□□□ -0.47
SEC61A1-206ENST00000491668 SHISA6Q6ZSJ9 500 aa12.1□□□□□ -0.47
SEC61A1-206ENST00000491668 RAB42Q8N4Z0 105 aa12.1□□□□□ -0.47
SEC61A1-206ENST00000491668 DCAKDQ8WVC6 231 aa12.1□□□□□ -0.47
SEC61A1-206ENST00000491668 MTBPQ96DY7 904 aa12.1□□□□□ -0.47
SEC61A1-206ENST00000491668 OR2A5Q96R48 311 aa12.1□□□□□ -0.47
SEC61A1-206ENST00000491668 OLFM1Q99784 485 aa12.1□□□□□ -0.47
SEC61A1-206ENST00000491668 ZFYVE21Q9BQ24 234 aa12.1□□□□□ -0.47
SEC61A1-206ENST00000491668 CAB39LQ9H9S4 337 aa12.1□□□□□ -0.47
SEC61A1-206ENST00000491668 ZBTB20Q9HC78 741 aaPredicted RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms