RNA–Protein interactions for RNA: ENST00000491064.5

CTDSP1-210, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 786 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-210ENST00000491064 RNFT1Q5M7Z0 435 aa12.87□□□□□ -0.35
CTDSP1-210ENST00000491064 TSTD2Q5T7W7 516 aa12.87□□□□□ -0.35
CTDSP1-210ENST00000491064 LDB1Q86U70 411 aaPredicted RBP12.87□□□□□ -0.35
CTDSP1-210ENST00000491064 SHISA5Q8N114 240 aa12.87□□□□□ -0.35
CTDSP1-210ENST00000491064 FAM71DQ8N9W8 422 aa12.87□□□□□ -0.35
CTDSP1-210ENST00000491064 FAM98AQ8NCA5 519 aaKnown RBP12.87□□□□□ -0.35
CTDSP1-210ENST00000491064 OR6P1Q8NGX9 317 aa12.87□□□□□ -0.35
CTDSP1-210ENST00000491064 GSDMBQ8TAX9 411 aa12.87□□□□□ -0.35
CTDSP1-210ENST00000491064 NRGNQ92686 78 aa12.87□□□□□ -0.35
CTDSP1-210ENST00000491064 ZNF778Q96MU6 729 aa12.87□□□□□ -0.35
CTDSP1-210ENST00000491064 CXXC4Q9H2H0 198 aa12.87□□□□□ -0.35
CTDSP1-210ENST00000491064 MRPS30Q9NP92 439 aaKnown RBP12.87□□□□□ -0.35
CTDSP1-210ENST00000491064 RIMKLBQ9ULI2 386 aa12.87□□□□□ -0.35
CTDSP1-210ENST00000491064 PCDHA3Q9Y5H8 950 aa12.87□□□□□ -0.35
CTDSP1-210ENST00000491064 FBN3Q75N90 2809 aa12.87□□□□□ -0.35
CTDSP1-210ENST00000491064 FLNAP21333 2647 aaKnown RBP12.87□□□□□ -0.35
CTDSP1-210ENST00000491064 A0A1B0GTL3 188 aa12.86□□□□□ -0.35
CTDSP1-210ENST00000491064 SYCE3A1L190 88 aa12.86□□□□□ -0.35
CTDSP1-210ENST00000491064 GABRR3A8MPY1 467 aa12.86□□□□□ -0.35
CTDSP1-210ENST00000491064 P2RX6O15547 441 aa12.86□□□□□ -0.35
CTDSP1-210ENST00000491064 PSMD3O43242 534 aa12.86□□□□□ -0.35
CTDSP1-210ENST00000491064 MFAP3LO75121 409 aa12.86□□□□□ -0.35
CTDSP1-210ENST00000491064 TPM3P06753 285 aa12.86□□□□□ -0.35
CTDSP1-210ENST00000491064 ERGP11308 486 aa12.86□□□□□ -0.35
CTDSP1-210ENST00000491064 ZNF24P17028 368 aa12.86□□□□□ -0.35
CTDSP1-210ENST00000491064 OC90Q02509 493 aaPredicted RBP12.86□□□□□ -0.35
CTDSP1-210ENST00000491064 CDH17Q12864 832 aa12.86□□□□□ -0.35
CTDSP1-210ENST00000491064 MINDY4Q4G0A6 757 aa12.86□□□□□ -0.35
CTDSP1-210ENST00000491064 MFSD4BQ5TF39 518 aa12.86□□□□□ -0.35
CTDSP1-210ENST00000491064 PTRHD1Q6GMV3 140 aaKnown RBP12.86□□□□□ -0.35
CTDSP1-210ENST00000491064 ZNF425Q6IV72 752 aa12.86□□□□□ -0.35
CTDSP1-210ENST00000491064 SLC25A25Q6KCM7 469 aa12.86□□□□□ -0.35
CTDSP1-210ENST00000491064 AADACL2Q6P093 401 aa12.86□□□□□ -0.35
CTDSP1-210ENST00000491064 SUSD1Q6UWL2 747 aa12.86□□□□□ -0.35
CTDSP1-210ENST00000491064 ANKRD37Q7Z713 158 aa12.86□□□□□ -0.35
CTDSP1-210ENST00000491064 LINC00523Q86TU6 105 aa12.86□□□□□ -0.35
CTDSP1-210ENST00000491064 TMEM200AQ86VY9 491 aa12.86□□□□□ -0.35
CTDSP1-210ENST00000491064 TGIF2LYQ8IUE0 185 aa12.86□□□□□ -0.35
CTDSP1-210ENST00000491064 DMRTC2Q8IXT2 367 aaPredicted RBP12.86□□□□□ -0.35
CTDSP1-210ENST00000491064 MARVELD2Q8N4S9 558 aa12.86□□□□□ -0.35
CTDSP1-210ENST00000491064 TAB3Q8N5C8 712 aaPredicted RBP12.86□□□□□ -0.35
CTDSP1-210ENST00000491064 M1APQ8TC57 530 aa12.86□□□□□ -0.35
CTDSP1-210ENST00000491064 MAGEC3Q8TD91 643 aa12.86□□□□□ -0.35
CTDSP1-210ENST00000491064 RERGQ96A58 199 aaPredicted RBP12.86□□□□□ -0.35
CTDSP1-210ENST00000491064 MRFAP1L1Q96HT8 127 aa12.86□□□□□ -0.35
CTDSP1-210ENST00000491064 FOPNLQ96NB1 174 aa12.86□□□□□ -0.35
CTDSP1-210ENST00000491064 PANX3Q96QZ0 392 aa12.86□□□□□ -0.35
CTDSP1-210ENST00000491064 MMP25Q9NPA2 562 aa12.86□□□□□ -0.35
CTDSP1-210ENST00000491064 TFR2Q9UP52 801 aa12.86□□□□□ -0.35
CTDSP1-210ENST00000491064 PHF3Q92576 2039 aaKnown RBP12.86□□□□□ -0.35
CTDSP1-210ENST00000491064 NKX2-6A6NCS4 301 aa12.85□□□□□ -0.35
CTDSP1-210ENST00000491064 OR2W5A6NFC9 320 aa12.85□□□□□ -0.35
CTDSP1-210ENST00000491064 SOWAHDA6NJG2 315 aa12.85□□□□□ -0.35
CTDSP1-210ENST00000491064 TXNDC9O14530 226 aa12.85□□□□□ -0.35
CTDSP1-210ENST00000491064 FAM155BO75949 473 aa12.85□□□□□ -0.35
CTDSP1-210ENST00000491064 TOXO94900 526 aa12.85□□□□□ -0.35
CTDSP1-210ENST00000491064 SUN1O94901 812 aa12.85□□□□□ -0.35
CTDSP1-210ENST00000491064 TJP3O95049 919 aa12.85□□□□□ -0.35
CTDSP1-210ENST00000491064 PKMP14618 531 aaKnown RBP12.85□□□□□ -0.35
CTDSP1-210ENST00000491064 EZRP15311 586 aaKnown RBP12.85□□□□□ -0.35
CTDSP1-210ENST00000491064 MSX1P28360 303 aa12.85□□□□□ -0.35
CTDSP1-210ENST00000491064 PTGER1P34995 402 aa12.85□□□□□ -0.35
CTDSP1-210ENST00000491064 MAGEA1P43355 309 aa12.85□□□□□ -0.35
CTDSP1-210ENST00000491064 AVPR1BP47901 424 aa12.85□□□□□ -0.35
CTDSP1-210ENST00000491064 GDF10P55107 478 aa12.85□□□□□ -0.35
CTDSP1-210ENST00000491064 PRAMEP78395 509 aa12.85□□□□□ -0.35
CTDSP1-210ENST00000491064 EXT1Q16394 746 aa12.85□□□□□ -0.35
CTDSP1-210ENST00000491064 AARS2Q5JTZ9 985 aaKnown RBP12.85□□□□□ -0.35
CTDSP1-210ENST00000491064 CEP128Q6ZU80 1094 aa12.85□□□□□ -0.35
CTDSP1-210ENST00000491064 OTOAQ7RTW8 1153 aa12.85□□□□□ -0.35
CTDSP1-210ENST00000491064 CPSF7Q8N684 471 aaKnown RBP12.85□□□□□ -0.35
CTDSP1-210ENST00000491064 HORMAD2Q8N7B1 307 aa12.85□□□□□ -0.35
CTDSP1-210ENST00000491064 OR9A1PQ8NGU1 263 aa12.85□□□□□ -0.35
CTDSP1-210ENST00000491064 OR9A4Q8NGU2 314 aa12.85□□□□□ -0.35
CTDSP1-210ENST00000491064 LILRB4Q8NHJ6 448 aa12.85□□□□□ -0.35
CTDSP1-210ENST00000491064 ASB5Q8WWX0 329 aa12.85□□□□□ -0.35
CTDSP1-210ENST00000491064 SMPDL3AQ92484 453 aa12.85□□□□□ -0.35
CTDSP1-210ENST00000491064 FOXC2Q99958 501 aa12.85□□□□□ -0.35
CTDSP1-210ENST00000491064 ZNF559Q9BR84 538 aa12.85□□□□□ -0.35
CTDSP1-210ENST00000491064 UCK2Q9BZX2 261 aa12.85□□□□□ -0.35
CTDSP1-210ENST00000491064 P2RY12Q9H244 342 aa12.85□□□□□ -0.35
CTDSP1-210ENST00000491064 LRFN1Q9P244 771 aa12.85□□□□□ -0.35
CTDSP1-210ENST00000491064 MARCH4Q9P2E8 410 aaPredicted RBP12.85□□□□□ -0.35
CTDSP1-210ENST00000491064 PCYOX1Q9UHG3 505 aa12.85□□□□□ -0.35
CTDSP1-210ENST00000491064 ZNF407Q9C0G0 2248 aa12.85□□□□□ -0.35
CTDSP1-210ENST00000491064 FAM90A27PA6NNH2 459 aa12.84□□□□□ -0.35
CTDSP1-210ENST00000491064 H0YIG0 161 aa12.84□□□□□ -0.35
CTDSP1-210ENST00000491064 KPNA5O15131 536 aa12.84□□□□□ -0.35
CTDSP1-210ENST00000491064 NME2P1O60361 137 aa12.84□□□□□ -0.35
CTDSP1-210ENST00000491064 SLC25A12O75746 678 aa12.84□□□□□ -0.35
CTDSP1-210ENST00000491064 NSA2O95478 260 aaKnown RBP12.84□□□□□ -0.35
CTDSP1-210ENST00000491064 KLK2P20151 261 aa12.84□□□□□ -0.35
CTDSP1-210ENST00000491064 NME2P22392 152 aa12.84□□□□□ -0.35
CTDSP1-210ENST00000491064 ADRA1DP25100 572 aa12.84□□□□□ -0.35
CTDSP1-210ENST00000491064 CHRNB4P30926 498 aa12.84□□□□□ -0.35
CTDSP1-210ENST00000491064 RPA3P35244 121 aaPredicted RBP12.84□□□□□ -0.35
CTDSP1-210ENST00000491064 XCR1P46094 333 aa12.84□□□□□ -0.35
CTDSP1-210ENST00000491064 TTPAP49638 278 aa12.84□□□□□ -0.35
CTDSP1-210ENST00000491064 AGTR2P50052 363 aa12.84□□□□□ -0.35
CTDSP1-210ENST00000491064 RELAQ04206 551 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms