RNA–Protein interactions for RNA: ENST00000491028.1

MCF2L-230, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-230ENST00000491028 SLC9B1P1A6NJY1 282 aa17.87■□□□□ 0.45
MCF2L-230ENST00000491028 HAT1O14929 419 aa17.87■□□□□ 0.45
MCF2L-230ENST00000491028 CASC3O15234 703 aaKnown RBP17.87■□□□□ 0.45
MCF2L-230ENST00000491028 MAP3K7O43318 606 aa17.87■□□□□ 0.45
MCF2L-230ENST00000491028 CAPN1P07384 714 aa17.87■□□□□ 0.45
MCF2L-230ENST00000491028 UROSP10746 265 aa17.87■□□□□ 0.45
MCF2L-230ENST00000491028 CEACAM1P13688 526 aa17.87■□□□□ 0.45
MCF2L-230ENST00000491028 HMOX2P30519 316 aa17.87■□□□□ 0.45
MCF2L-230ENST00000491028 RPL14P50914 215 aaKnown RBP17.87■□□□□ 0.45
MCF2L-230ENST00000491028 HK2P52789 917 aa17.87■□□□□ 0.45
MCF2L-230ENST00000491028 RPS15AP62244 130 aaKnown RBP17.87■□□□□ 0.45
MCF2L-230ENST00000491028 KANK2Q63ZY3 851 aa17.87■□□□□ 0.45
MCF2L-230ENST00000491028 TTC19Q6DKK2 380 aaPredicted RBP17.87■□□□□ 0.45
MCF2L-230ENST00000491028 TMIGD1Q6UXZ0 262 aa17.87■□□□□ 0.45
MCF2L-230ENST00000491028 RBM44Q6ZP01 1051 aaKnown RBP17.87■□□□□ 0.45
MCF2L-230ENST00000491028 RNF44Q7L0R7 432 aa17.87■□□□□ 0.45
MCF2L-230ENST00000491028 TMPRSS9Q7Z410 1059 aa17.87■□□□□ 0.45
MCF2L-230ENST00000491028 SLITRK4Q8IW52 837 aa17.87■□□□□ 0.45
MCF2L-230ENST00000491028 LAS2Q8IYD9 372 aa17.87■□□□□ 0.45
MCF2L-230ENST00000491028 CLYBLQ8N0X4 340 aa17.87■□□□□ 0.45
MCF2L-230ENST00000491028 CDYL2Q8N8U2 506 aa17.87■□□□□ 0.45
MCF2L-230ENST00000491028 METTL6Q8TCB7 284 aa17.87■□□□□ 0.45
MCF2L-230ENST00000491028 KLHL6Q8WZ60 621 aa17.87■□□□□ 0.45
MCF2L-230ENST00000491028 SEC16BQ96JE7 1060 aa17.87■□□□□ 0.45
MCF2L-230ENST00000491028 SLC41A2Q96JW4 573 aa17.87■□□□□ 0.45
MCF2L-230ENST00000491028 TMEM74Q96NL1 305 aa17.87■□□□□ 0.45
MCF2L-230ENST00000491028 SPNS1Q9H2V7 528 aa17.87■□□□□ 0.45
MCF2L-230ENST00000491028 TNFRSF12AQ9NP84 129 aa17.87■□□□□ 0.45
MCF2L-230ENST00000491028 SLCO1B3Q9NPD5 702 aa17.87■□□□□ 0.45
MCF2L-230ENST00000491028 ZDHHC2Q9UIJ5 367 aa17.87■□□□□ 0.45
MCF2L-230ENST00000491028 SNX6Q9UNH7 406 aa17.87■□□□□ 0.45
MCF2L-230ENST00000491028 KLHL20Q9Y2M5 609 aa17.87■□□□□ 0.45
MCF2L-230ENST00000491028 TSC22D4Q9Y3Q8 395 aa17.87■□□□□ 0.45
MCF2L-230ENST00000491028 TRAF6Q9Y4K3 522 aa17.87■□□□□ 0.45
MCF2L-230ENST00000491028 ADAMTS20P59510 1910 aa17.87■□□□□ 0.45
MCF2L-230ENST00000491028 FAM186AA6NE01 2351 aa17.87■□□□□ 0.45
MCF2L-230ENST00000491028 IGHV5-10-1A0A0J9YXX1 117 aa17.86■□□□□ 0.45
MCF2L-230ENST00000491028 EDF1O60869 148 aaKnown RBP17.86■□□□□ 0.45
MCF2L-230ENST00000491028 DKK1O94907 266 aa17.86■□□□□ 0.45
MCF2L-230ENST00000491028 CHEK2O96017 543 aa17.86■□□□□ 0.45
MCF2L-230ENST00000491028 KRT6AP02538 564 aa17.86■□□□□ 0.45
MCF2L-230ENST00000491028 KRT6BP04259 564 aa17.86■□□□□ 0.45
MCF2L-230ENST00000491028 SDHBP21912 280 aa17.86■□□□□ 0.45
MCF2L-230ENST00000491028 SERPINB1P30740 379 aa17.86■□□□□ 0.45
MCF2L-230ENST00000491028 MLLT3P42568 568 aaPredicted RBP17.86■□□□□ 0.45
MCF2L-230ENST00000491028 KRT6CP48668 564 aa17.86■□□□□ 0.45
MCF2L-230ENST00000491028 GNGT1P63211 74 aa17.86■□□□□ 0.45
MCF2L-230ENST00000491028 MEF2AQ02078 507 aaPredicted RBP17.86■□□□□ 0.45
MCF2L-230ENST00000491028 ZNF33BQ06732 778 aa17.86■□□□□ 0.45
MCF2L-230ENST00000491028 ZRSR2Q15696 482 aaKnown RBP17.86■□□□□ 0.45
MCF2L-230ENST00000491028 ZIC1Q15915 447 aa17.86■□□□□ 0.45
MCF2L-230ENST00000491028 CPSF6Q16630 551 aaKnown RBP eCLIP17.86■□□□□ 0.45
MCF2L-230ENST00000491028 ZC3H12BQ5HYM0 836 aaKnown RBP17.86■□□□□ 0.45
MCF2L-230ENST00000491028 FAM47EQ6ZV65 393 aa17.86■□□□□ 0.45
MCF2L-230ENST00000491028 ARHGAP22Q7Z5H3 698 aa17.86■□□□□ 0.45
MCF2L-230ENST00000491028 TTLQ8NG68 377 aa17.86■□□□□ 0.45
MCF2L-230ENST00000491028 THAP11Q96EK4 314 aa17.86■□□□□ 0.45
MCF2L-230ENST00000491028 FAR2Q96K12 515 aa17.86■□□□□ 0.45
MCF2L-230ENST00000491028 CCDC74BQ96LY2 380 aa17.86■□□□□ 0.45
MCF2L-230ENST00000491028 ZFYVE21Q9BQ24 234 aa17.86■□□□□ 0.45
MCF2L-230ENST00000491028 KLHL25Q9H0H3 589 aa17.86■□□□□ 0.45
MCF2L-230ENST00000491028 PDE7BQ9NP56 450 aa17.86■□□□□ 0.45
MCF2L-230ENST00000491028 SOHLH2Q9NX45 425 aa17.86■□□□□ 0.45
MCF2L-230ENST00000491028 ADGRE2Q9UHX3 823 aa17.86■□□□□ 0.45
MCF2L-230ENST00000491028 APOBEC2Q9Y235 224 aaKnown RBP17.86■□□□□ 0.45
MCF2L-230ENST00000491028 SLCO1B7G3V0H7 640 aa17.85■□□□□ 0.45
MCF2L-230ENST00000491028 VIMP08670 466 aaKnown RBP17.85■□□□□ 0.45
MCF2L-230ENST00000491028 LSP1P33241 339 aa17.85■□□□□ 0.45
MCF2L-230ENST00000491028 AHRP35869 848 aa17.85■□□□□ 0.45
MCF2L-230ENST00000491028 SCTRP47872 440 aa17.85■□□□□ 0.45
MCF2L-230ENST00000491028 ARL4DP49703 201 aa17.85■□□□□ 0.45
MCF2L-230ENST00000491028 FOXA1P55317 472 aa17.85■□□□□ 0.45
MCF2L-230ENST00000491028 PHEXP78562 749 aa17.85■□□□□ 0.45
MCF2L-230ENST00000491028 HSD11B2P80365 405 aa17.85■□□□□ 0.45
MCF2L-230ENST00000491028 INSM1Q01101 510 aaPredicted RBP17.85■□□□□ 0.45
MCF2L-230ENST00000491028 ZFP36L1Q07352 338 aaKnown RBP17.85■□□□□ 0.45
MCF2L-230ENST00000491028 IFT88Q13099 833 aa17.85■□□□□ 0.45
MCF2L-230ENST00000491028 SNAP47Q5SQN1 464 aa17.85■□□□□ 0.45
MCF2L-230ENST00000491028 TMTC4Q5T4D3 741 aa17.85■□□□□ 0.45
MCF2L-230ENST00000491028 CDCP2Q5VXM1 449 aa17.85■□□□□ 0.45
MCF2L-230ENST00000491028 FRG2Q64ET8 278 aa17.85■□□□□ 0.45
MCF2L-230ENST00000491028 RNF165Q6ZSG1 346 aa17.85■□□□□ 0.45
MCF2L-230ENST00000491028 MFSD9Q8NBP5 474 aa17.85■□□□□ 0.45
MCF2L-230ENST00000491028 ZNF740Q8NDX6 193 aa17.85■□□□□ 0.45
MCF2L-230ENST00000491028 OR7G3Q8NG95 312 aa17.85■□□□□ 0.45
MCF2L-230ENST00000491028 WDR20Q8TBZ3 569 aa17.85■□□□□ 0.45
MCF2L-230ENST00000491028 PIWIL2Q8TC59 973 aaKnown RBP17.85■□□□□ 0.45
MCF2L-230ENST00000491028 AGR3Q8TD06 166 aa17.85■□□□□ 0.45
MCF2L-230ENST00000491028 ZNF317Q96PQ6 595 aaPredicted RBP17.85■□□□□ 0.45
MCF2L-230ENST00000491028 FRG2BQ96QU4 278 aa17.85■□□□□ 0.45
MCF2L-230ENST00000491028 KCNA7Q96RP8 456 aa17.85■□□□□ 0.45
MCF2L-230ENST00000491028 RHBGQ9H310 441 aa17.85■□□□□ 0.45
MCF2L-230ENST00000491028 ELOVL6Q9H5J4 265 aa17.85■□□□□ 0.45
MCF2L-230ENST00000491028 PILRAQ9UKJ1 303 aa17.85■□□□□ 0.45
MCF2L-230ENST00000491028 PCDHGA4Q9Y5G9 962 aa17.85■□□□□ 0.45
MCF2L-230ENST00000491028 RIF1Q5UIP0 2472 aaKnown RBP17.84■□□□□ 0.45
MCF2L-230ENST00000491028 GVINP1Q7Z2Y8 2422 aa17.84■□□□□ 0.45
MCF2L-230ENST00000491028 FEZF1A0PJY2 475 aa17.84■□□□□ 0.45
MCF2L-230ENST00000491028 FFAR3O14843 346 aa17.84■□□□□ 0.45
MCF2L-230ENST00000491028 GPR42O15529 346 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms