RNA–Protein interactions for RNA: ENST00000490751.1

LDB1-204, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-204ENST00000490751 PNPLA2Q96AD5 504 aa29.83■■■□□ 2.37
LDB1-204ENST00000490751 VPS50Q96JG6 964 aa29.83■■■□□ 2.37
LDB1-204ENST00000490751 YIPF2Q9BWQ6 316 aa29.83■■■□□ 2.37
LDB1-204ENST00000490751 SGPP1Q9BX95 441 aa29.83■■■□□ 2.37
LDB1-204ENST00000490751 DRC3Q9H069 523 aa29.83■■■□□ 2.37
LDB1-204ENST00000490751 SLAMF7Q9NQ25 335 aa29.83■■■□□ 2.37
LDB1-204ENST00000490751 C3orf18Q9UK00 162 aa29.83■■■□□ 2.37
LDB1-204ENST00000490751 SETXQ7Z333 2677 aaKnown RBP29.83■■■□□ 2.37
LDB1-204ENST00000490751 DOCK10Q96BY6 2186 aa29.83■■■□□ 2.37
LDB1-204ENST00000490751 PABPN1LA6NDY0 278 aaKnown RBP29.82■■■□□ 2.36
LDB1-204ENST00000490751 FOXS1O43638 330 aa29.82■■■□□ 2.36
LDB1-204ENST00000490751 CCND1P24385 295 aa29.82■■■□□ 2.36
LDB1-204ENST00000490751 RPS15AP62244 130 aaKnown RBP29.82■■■□□ 2.36
LDB1-204ENST00000490751 CSNK1G2P78368 415 aa29.82■■■□□ 2.36
LDB1-204ENST00000490751 LCTLQ6UWM7 567 aa29.82■■■□□ 2.36
LDB1-204ENST00000490751 ZBED8Q8IZ13 594 aa29.82■■■□□ 2.36
LDB1-204ENST00000490751 C17orf53Q8N3J3 647 aaPredicted RBP29.82■■■□□ 2.36
LDB1-204ENST00000490751 AMER3Q8N944 861 aa29.82■■■□□ 2.36
LDB1-204ENST00000490751 SPATA4Q8NEY3 305 aa29.82■■■□□ 2.36
LDB1-204ENST00000490751 OR11G2Q8NGC1 345 aa29.82■■■□□ 2.36
LDB1-204ENST00000490751 MESP1Q9BRJ9 268 aa29.82■■■□□ 2.36
LDB1-204ENST00000490751 DPH5Q9H2P9 285 aa29.82■■■□□ 2.36
LDB1-204ENST00000490751 ARL15Q9NXU5 204 aa29.82■■■□□ 2.36
LDB1-204ENST00000490751 MOCS1Q9NZB8 636 aa29.82■■■□□ 2.36
LDB1-204ENST00000490751 A0A0A6YYC8 382 aaPredicted RBP29.81■■■□□ 2.36
LDB1-204ENST00000490751 I3L1I5 382 aaPredicted RBP29.81■■■□□ 2.36
LDB1-204ENST00000490751 IPO13O94829 963 aaKnown RBP29.81■■■□□ 2.36
LDB1-204ENST00000490751 ANXA5P08758 320 aa29.81■■■□□ 2.36
LDB1-204ENST00000490751 SLC26A3P40879 764 aa29.81■■■□□ 2.36
LDB1-204ENST00000490751 VN1R4Q7Z5H5 301 aa29.81■■■□□ 2.36
LDB1-204ENST00000490751 STRA8Q7Z7C7 330 aa29.81■■■□□ 2.36
LDB1-204ENST00000490751 TRIM54Q9BYV2 358 aa29.81■■■□□ 2.36
LDB1-204ENST00000490751 MAP4K5Q9Y4K4 846 aa29.81■■■□□ 2.36
LDB1-204ENST00000490751 RELNP78509 3460 aa29.81■■■□□ 2.36
LDB1-204ENST00000490751 FAM187AA6NFU0 413 aa29.8■■■□□ 2.36
LDB1-204ENST00000490751 SAT1P21673 171 aa29.8■■■□□ 2.36
LDB1-204ENST00000490751 AP1S2P56377 157 aa29.8■■■□□ 2.36
LDB1-204ENST00000490751 CBLBQ13191 982 aa29.8■■■□□ 2.36
LDB1-204ENST00000490751 FAM53BQ14153 422 aa29.8■■■□□ 2.36
LDB1-204ENST00000490751 NDUFA9Q16795 377 aa29.8■■■□□ 2.36
LDB1-204ENST00000490751 ZXDCQ2QGD7 858 aaPredicted RBP29.8■■■□□ 2.36
LDB1-204ENST00000490751 PRR30Q53SZ7 412 aaPredicted RBP29.8■■■□□ 2.36
LDB1-204ENST00000490751 CAPN13Q6MZZ7 669 aaPredicted RBP29.8■■■□□ 2.36
LDB1-204ENST00000490751 LAPTM4BQ86VI4 370 aa29.8■■■□□ 2.36
LDB1-204ENST00000490751 SLC26A11Q86WA9 606 aa29.8■■■□□ 2.36
LDB1-204ENST00000490751 ZC3HC1Q86WB0 502 aaKnown RBP29.8■■■□□ 2.36
LDB1-204ENST00000490751 PARP9Q8IXQ6 854 aa29.8■■■□□ 2.36
LDB1-204ENST00000490751 ERP44Q9BS26 406 aa29.8■■■□□ 2.36
LDB1-204ENST00000490751 IKZF3Q9UKT9 509 aa29.8■■■□□ 2.36
LDB1-204ENST00000490751 MRPS2Q9Y399 296 aaKnown RBP29.8■■■□□ 2.36
LDB1-204ENST00000490751 KCNE1BA0A087WTH5 132 aa29.79■■■□□ 2.36
LDB1-204ENST00000490751 MAP2K7O14733 419 aa29.79■■■□□ 2.36
LDB1-204ENST00000490751 RAD51CO43502 376 aa29.79■■■□□ 2.36
LDB1-204ENST00000490751 CDH1P12830 882 aa29.79■■■□□ 2.36
LDB1-204ENST00000490751 ACPPP15309 386 aa29.79■■■□□ 2.36
LDB1-204ENST00000490751 CASQ1P31415 396 aa29.79■■■□□ 2.36
LDB1-204ENST00000490751 SNRPNP63162 240 aaKnown RBP29.79■■■□□ 2.36
LDB1-204ENST00000490751 C2orf54Q08AI8 447 aa29.79■■■□□ 2.36
LDB1-204ENST00000490751 CALCOCO2Q13137 446 aa29.79■■■□□ 2.36
LDB1-204ENST00000490751 DUPD1Q68J44 220 aa29.79■■■□□ 2.36
LDB1-204ENST00000490751 TMEM207Q6UWW9 146 aa29.79■■■□□ 2.36
LDB1-204ENST00000490751 IGFL3Q6UXB1 125 aa29.79■■■□□ 2.36
LDB1-204ENST00000490751 CAPN12Q6ZSI9 719 aa29.79■■■□□ 2.36
LDB1-204ENST00000490751 MAATS1Q7Z4T9 603 aa29.79■■■□□ 2.36
LDB1-204ENST00000490751 TM9SF4Q92544 642 aa29.79■■■□□ 2.36
LDB1-204ENST00000490751 PYCR2Q96C36 320 aa29.79■■■□□ 2.36
LDB1-204ENST00000490751 C8orf44Q96CB5 159 aa29.79■■■□□ 2.36
LDB1-204ENST00000490751 THAP11Q96EK4 314 aa29.79■■■□□ 2.36
LDB1-204ENST00000490751 PDLIM5Q96HC4 596 aaKnown RBP29.79■■■□□ 2.36
LDB1-204ENST00000490751 ZBTB20Q9HC78 741 aaPredicted RBP29.79■■■□□ 2.36
LDB1-204ENST00000490751 MKKSQ9NPJ1 570 aaPredicted RBP29.79■■■□□ 2.36
LDB1-204ENST00000490751 C14orf105Q9NVL8 296 aa29.79■■■□□ 2.36
LDB1-204ENST00000490751 WHRNQ9P202 907 aa29.79■■■□□ 2.36
LDB1-204ENST00000490751 FAM95CA0A1B0GW59 222 aa29.78■■■□□ 2.36
LDB1-204ENST00000490751 FEZF1A0PJY2 475 aa29.78■■■□□ 2.36
LDB1-204ENST00000490751 IDSB3KWA1 339 aa29.78■■■□□ 2.36
LDB1-204ENST00000490751 VPS4BO75351 444 aa29.78■■■□□ 2.36
LDB1-204ENST00000490751 ENO2P09104 434 aaPredicted RBP29.78■■■□□ 2.36
LDB1-204ENST00000490751 NPPBP16860 134 aa29.78■■■□□ 2.36
LDB1-204ENST00000490751 ZNF37AP17032 561 aaPredicted RBP29.78■■■□□ 2.36
LDB1-204ENST00000490751 EMP2P54851 167 aa29.78■■■□□ 2.36
LDB1-204ENST00000490751 INPP5JQ15735 1006 aaPredicted RBP29.78■■■□□ 2.36
LDB1-204ENST00000490751 SYT16Q17RD7 645 aa29.78■■■□□ 2.36
LDB1-204ENST00000490751 IRAK1BP1Q5VVH5 260 aa29.78■■■□□ 2.36
LDB1-204ENST00000490751 OR56A3Q8NH54 315 aa29.78■■■□□ 2.36
LDB1-204ENST00000490751 HAUS8Q9BT25 410 aa29.78■■■□□ 2.36
LDB1-204ENST00000490751 VPS4AQ9UN37 437 aa29.78■■■□□ 2.36
LDB1-204ENST00000490751 SHANK1Q9Y566 2161 aa29.78■■■□□ 2.36
LDB1-204ENST00000490751 FLNCQ14315 2725 aa29.77■■■□□ 2.36
LDB1-204ENST00000490751 GUCA1CO95843 209 aa29.77■■■□□ 2.36
LDB1-204ENST00000490751 BCL6P41182 706 aa29.77■■■□□ 2.36
LDB1-204ENST00000490751 AVPR1BP47901 424 aa29.77■■■□□ 2.36
LDB1-204ENST00000490751 MAT1AQ00266 395 aaKnown RBP29.77■■■□□ 2.36
LDB1-204ENST00000490751 PLEKHN1Q494U1 663 aaPredicted RBP29.77■■■□□ 2.36
LDB1-204ENST00000490751 FBXL8Q96CD0 374 aa29.77■■■□□ 2.36
LDB1-204ENST00000490751 MACROD1Q9BQ69 325 aa29.77■■■□□ 2.36
LDB1-204ENST00000490751 NSMCE4AQ9NXX6 385 aa29.77■■■□□ 2.36
LDB1-204ENST00000490751 B3GNT3Q9Y2A9 372 aa29.77■■■□□ 2.36
LDB1-204ENST00000490751 HPP00738 406 aa29.76■■■□□ 2.35
LDB1-204ENST00000490751 GRK3P35626 688 aa29.76■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms