RNA–Protein interactions for RNA: ENST00000490278.1

CD46-216, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 747 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-216ENST00000490278 EXT1Q16394 746 aa3.45□□□□□ -1.86
CD46-216ENST00000490278 ZNF74Q16587 644 aa3.45□□□□□ -1.86
CD46-216ENST00000490278 OTUD3Q5T2D3 398 aaPredicted RBP3.45□□□□□ -1.86
CD46-216ENST00000490278 ADAMTSL4-AS1Q5T5F5 129 aa3.45□□□□□ -1.86
CD46-216ENST00000490278 PWWP2BQ6NUJ5 590 aa3.45□□□□□ -1.86
CD46-216ENST00000490278 CYB5D1Q6P9G0 228 aa3.45□□□□□ -1.86
CD46-216ENST00000490278 C11orf88Q6PI97 169 aa3.45□□□□□ -1.86
CD46-216ENST00000490278 BTNL8Q6UX41 500 aa3.45□□□□□ -1.86
CD46-216ENST00000490278 Q6ZSR9 355 aa3.45□□□□□ -1.86
CD46-216ENST00000490278 BTN2A1Q7KYR7 527 aa3.45□□□□□ -1.86
CD46-216ENST00000490278 RCOR2Q8IZ40 523 aa3.45□□□□□ -1.86
CD46-216ENST00000490278 DCLK2Q8N568 766 aa3.45□□□□□ -1.86
CD46-216ENST00000490278 FAM89BQ8N5H3 189 aa3.45□□□□□ -1.86
CD46-216ENST00000490278 ZNF248Q8NDW4 579 aa3.45□□□□□ -1.86
CD46-216ENST00000490278 NCOA7Q8NI08 942 aa3.45□□□□□ -1.86
CD46-216ENST00000490278 JAKMIP1Q96N16 626 aaKnown RBP3.45□□□□□ -1.86
CD46-216ENST00000490278 KLHL5Q96PQ7 755 aa3.45□□□□□ -1.86
CD46-216ENST00000490278 BTBD9Q96Q07 612 aa3.45□□□□□ -1.86
CD46-216ENST00000490278 NKX3-1Q99801 234 aaPredicted RBP3.45□□□□□ -1.86
CD46-216ENST00000490278 PIGQQ9BRB3 760 aa3.45□□□□□ -1.86
CD46-216ENST00000490278 CDK19Q9BWU1 502 aa3.45□□□□□ -1.86
CD46-216ENST00000490278 RNF121Q9H920 327 aa3.45□□□□□ -1.86
CD46-216ENST00000490278 FGF22Q9HCT0 170 aa3.45□□□□□ -1.86
CD46-216ENST00000490278 PHPT1Q9NRX4 125 aaPredicted RBP3.45□□□□□ -1.86
CD46-216ENST00000490278 WDR37Q9Y2I8 494 aa3.45□□□□□ -1.86
CD46-216ENST00000490278 YDJCA8MPS7 323 aa3.44□□□□□ -1.86
CD46-216ENST00000490278 SLC30A4O14863 429 aa3.44□□□□□ -1.86
CD46-216ENST00000490278 TEX28O15482 410 aa3.44□□□□□ -1.86
CD46-216ENST00000490278 SELENOFO60613 162 aa3.44□□□□□ -1.86
CD46-216ENST00000490278 ZG16O60844 167 aa3.44□□□□□ -1.86
CD46-216ENST00000490278 PRKAR1AP10644 381 aa3.44□□□□□ -1.86
CD46-216ENST00000490278 LEPRP48357 1165 aaKnown RBP3.44□□□□□ -1.86
CD46-216ENST00000490278 IL10RBQ08334 325 aa3.44□□□□□ -1.86
CD46-216ENST00000490278 SGCGQ13326 291 aa3.44□□□□□ -1.86
CD46-216ENST00000490278 SGSM1Q2NKQ1 1148 aa3.44□□□□□ -1.86
CD46-216ENST00000490278 ZFP69Q49AA0 526 aa3.44□□□□□ -1.86
CD46-216ENST00000490278 NHSL2Q5HYW2 709 aa3.44□□□□□ -1.86
CD46-216ENST00000490278 ADAM5Q6NVV9 412 aa3.44□□□□□ -1.86
CD46-216ENST00000490278 TTC27Q6P3X3 843 aa3.44□□□□□ -1.86
CD46-216ENST00000490278 FUT10Q6P4F1 479 aa3.44□□□□□ -1.86
CD46-216ENST00000490278 BHLHB9Q6PI77 547 aa3.44□□□□□ -1.86
CD46-216ENST00000490278 PTAR1Q7Z6K3 402 aaPredicted RBP3.44□□□□□ -1.86
CD46-216ENST00000490278 HOGA1Q86XE5 327 aa3.44□□□□□ -1.86
CD46-216ENST00000490278 CCDC60Q8IWA6 550 aaPredicted RBP3.44□□□□□ -1.86
CD46-216ENST00000490278 LRTM2Q8N967 370 aa3.44□□□□□ -1.86
CD46-216ENST00000490278 NHLRC2Q8NBF2 726 aa3.44□□□□□ -1.86
CD46-216ENST00000490278 ATAD1Q8NBU5 361 aa3.44□□□□□ -1.86
CD46-216ENST00000490278 ADAD2Q8NCV1 583 aaKnown RBP3.44□□□□□ -1.86
CD46-216ENST00000490278 CTCFLQ8NI51 663 aaPredicted RBP3.44□□□□□ -1.86
CD46-216ENST00000490278 HCAR2Q8TDS4 363 aa3.44□□□□□ -1.86
CD46-216ENST00000490278 GRK7Q8WTQ7 553 aa3.44□□□□□ -1.86
CD46-216ENST00000490278 GATAD1Q8WUU5 269 aa3.44□□□□□ -1.86
CD46-216ENST00000490278 ZNRF4Q8WWF5 429 aa3.44□□□□□ -1.86
CD46-216ENST00000490278 AZIN2Q96A70 460 aa3.44□□□□□ -1.86
CD46-216ENST00000490278 NECTIN4Q96NY8 510 aa3.44□□□□□ -1.86
CD46-216ENST00000490278 PARK7Q99497 189 aaKnown RBP3.44□□□□□ -1.86
CD46-216ENST00000490278 ASCL2Q99929 193 aa3.44□□□□□ -1.86
CD46-216ENST00000490278 RAVER2Q9HCJ3 691 aaKnown RBP3.44□□□□□ -1.86
CD46-216ENST00000490278 ARMCX3Q9UH62 379 aaPredicted RBP3.44□□□□□ -1.86
CD46-216ENST00000490278 PRDM4Q9UKN5 801 aa3.44□□□□□ -1.86
CD46-216ENST00000490278 CDH7Q9ULB5 785 aa3.44□□□□□ -1.86
CD46-216ENST00000490278 RUVBL2Q9Y230 463 aaKnown RBP3.44□□□□□ -1.86
CD46-216ENST00000490278 A0A087WUV0 522 aaPredicted RBP3.43□□□□□ -1.86
CD46-216ENST00000490278 A0A087X002 238 aa3.43□□□□□ -1.86
CD46-216ENST00000490278 OOEPA6NGQ2 149 aa3.43□□□□□ -1.86
CD46-216ENST00000490278 PRSS46E5RG02 174 aa3.43□□□□□ -1.86
CD46-216ENST00000490278 H0YAE9 185 aa3.43□□□□□ -1.86
CD46-216ENST00000490278 ZNF195O14628 629 aa3.43□□□□□ -1.86
CD46-216ENST00000490278 STX6O43752 255 aa3.43□□□□□ -1.86
CD46-216ENST00000490278 MOCS2O96007 188 aaPredicted RBP3.43□□□□□ -1.86
CD46-216ENST00000490278 SUPT20HL2P0C7V6 817 aa3.43□□□□□ -1.86
CD46-216ENST00000490278 CD59P13987 128 aa3.43□□□□□ -1.86
CD46-216ENST00000490278 RPL35AP18077 110 aaKnown RBP3.43□□□□□ -1.86
CD46-216ENST00000490278 TNNT3P45378 269 aaPredicted RBP3.43□□□□□ -1.86
CD46-216ENST00000490278 PMP22Q01453 160 aa3.43□□□□□ -1.86
CD46-216ENST00000490278 PTPN14Q15678 1187 aa3.43□□□□□ -1.86
CD46-216ENST00000490278 CASC4Q6P4E1 433 aa3.43□□□□□ -1.86
CD46-216ENST00000490278 FIP1L1Q6UN15 594 aaKnown RBP3.43□□□□□ -1.86
CD46-216ENST00000490278 LEKR1Q6ZMV7 388 aa3.43□□□□□ -1.86
CD46-216ENST00000490278 FCRLAQ7L513 359 aa3.43□□□□□ -1.86
CD46-216ENST00000490278 CPEB2Q7Z5Q1 589 aaKnown RBP3.43□□□□□ -1.86
CD46-216ENST00000490278 GPR141Q7Z602 305 aa3.43□□□□□ -1.86
CD46-216ENST00000490278 PIGWQ7Z7B1 504 aa3.43□□□□□ -1.86
CD46-216ENST00000490278 GBP7Q8N8V2 638 aaPredicted RBP3.43□□□□□ -1.86
CD46-216ENST00000490278 WDSUB1Q8N9V3 476 aa3.43□□□□□ -1.86
CD46-216ENST00000490278 SMAP2Q8WU79 429 aaPredicted RBP3.43□□□□□ -1.86
CD46-216ENST00000490278 ATP6V1E2Q96A05 226 aa3.43□□□□□ -1.86
CD46-216ENST00000490278 KRTAP2-2Q9BYT5 123 aa3.43□□□□□ -1.86
CD46-216ENST00000490278 COPS7BQ9H9Q2 264 aaPredicted RBP3.43□□□□□ -1.86
CD46-216ENST00000490278 PLCXD1Q9NUJ7 323 aa3.43□□□□□ -1.86
CD46-216ENST00000490278 MDFICQ9P1T7 246 aa3.43□□□□□ -1.86
CD46-216ENST00000490278 TMEM181Q9P2C4 612 aa3.43□□□□□ -1.86
CD46-216ENST00000490278 CACNG5Q9UF02 275 aa3.43□□□□□ -1.86
CD46-216ENST00000490278 IL36AQ9UHA7 158 aa3.43□□□□□ -1.86
CD46-216ENST00000490278 ELF5Q9UKW6 265 aaPredicted RBP3.43□□□□□ -1.86
CD46-216ENST00000490278 TRAV18A0A075B6X5 111 aa3.42□□□□□ -1.86
CD46-216ENST00000490278 FAM170AA1A519 330 aa3.42□□□□□ -1.86
CD46-216ENST00000490278 NPIPA3F8WFD2 350 aa3.42□□□□□ -1.86
CD46-216ENST00000490278 PI4K2BG5E9Z4 385 aa3.42□□□□□ -1.86
CD46-216ENST00000490278 ST8SIA3O43173 380 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms