RNA–Protein interactions for RNA: ENST00000490163.5

UBXN4-208, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 3,394 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-208ENST00000490163 PRMT1Q99873 361 aaKnown RBP2.79□□□□□ -1.96
UBXN4-208ENST00000490163 SCNM1Q9BWG6 230 aa2.79□□□□□ -1.96
UBXN4-208ENST00000490163 FN3KQ9H479 309 aa2.79□□□□□ -1.96
UBXN4-208ENST00000490163 FN3KRPQ9HA64 309 aa2.79□□□□□ -1.96
UBXN4-208ENST00000490163 FAM96BQ9Y3D0 163 aa2.79□□□□□ -1.96
UBXN4-208ENST00000490163 SNX9Q9Y5X1 595 aa2.79□□□□□ -1.96
UBXN4-208ENST00000490163 BTAF1O14981 1849 aa2.79□□□□□ -1.96
UBXN4-208ENST00000490163 NSD3Q9BZ95 1437 aa2.79□□□□□ -1.96
UBXN4-208ENST00000490163 A0A1W2PRX2 142 aa2.79□□□□□ -1.96
UBXN4-208ENST00000490163 CHUKO15111 745 aa2.79□□□□□ -1.96
UBXN4-208ENST00000490163 TSC22D2O75157 780 aa2.79□□□□□ -1.96
UBXN4-208ENST00000490163 PDHBP11177 359 aa2.79□□□□□ -1.96
UBXN4-208ENST00000490163 CYP19A1P11511 503 aaPredicted RBP2.79□□□□□ -1.96
UBXN4-208ENST00000490163 EZRP15311 586 aaKnown RBP2.79□□□□□ -1.96
UBXN4-208ENST00000490163 HNRNPH1P31943 449 aaKnown RBP2.79□□□□□ -1.96
UBXN4-208ENST00000490163 HSPA4P34932 840 aa2.79□□□□□ -1.96
UBXN4-208ENST00000490163 NUMBP49757 651 aa2.79□□□□□ -1.96
UBXN4-208ENST00000490163 PGFP49763 221 aa2.79□□□□□ -1.96
UBXN4-208ENST00000490163 CERKLQ49MI3 558 aaPredicted RBP2.79□□□□□ -1.96
UBXN4-208ENST00000490163 LRRC23Q53EV4 343 aaPredicted RBP2.79□□□□□ -1.96
UBXN4-208ENST00000490163 ATAD3BQ5T9A4 648 aa2.79□□□□□ -1.96
UBXN4-208ENST00000490163 PLPP4Q5VZY2 271 aa2.79□□□□□ -1.96
UBXN4-208ENST00000490163 KIRREL2Q6UWL6 708 aa2.79□□□□□ -1.96
UBXN4-208ENST00000490163 BNIPLQ7Z465 357 aa2.79□□□□□ -1.96
UBXN4-208ENST00000490163 SCD5Q86SK9 330 aa2.79□□□□□ -1.96
UBXN4-208ENST00000490163 ADAMTSL2Q86TH1 951 aa2.79□□□□□ -1.96
UBXN4-208ENST00000490163 ANKRD46Q86W74 232 aa2.79□□□□□ -1.96
UBXN4-208ENST00000490163 MEX3DQ86XN8 651 aaKnown RBP2.79□□□□□ -1.96
UBXN4-208ENST00000490163 APCDD1Q8J025 514 aa2.79□□□□□ -1.96
UBXN4-208ENST00000490163 CLEC1AQ8NC01 280 aa2.79□□□□□ -1.96
UBXN4-208ENST00000490163 ABHD11Q8NFV4 315 aa2.79□□□□□ -1.96
UBXN4-208ENST00000490163 GDPD5Q8WTR4 605 aa2.79□□□□□ -1.96
UBXN4-208ENST00000490163 CACTINQ8WUQ7 758 aaKnown RBP2.79□□□□□ -1.96
UBXN4-208ENST00000490163 ZKSCAN4Q969J2 545 aaPredicted RBP2.79□□□□□ -1.96
UBXN4-208ENST00000490163 CSF3RQ99062 836 aa2.79□□□□□ -1.96
UBXN4-208ENST00000490163 GAD1Q99259 594 aa2.79□□□□□ -1.96
UBXN4-208ENST00000490163 EHD1Q9H4M9 534 aa2.79□□□□□ -1.96
UBXN4-208ENST00000490163 MAP6D1Q9H9H5 199 aa2.79□□□□□ -1.96
UBXN4-208ENST00000490163 ZNF304Q9HCX3 659 aa2.79□□□□□ -1.96
UBXN4-208ENST00000490163 NOX4Q9NPH5 578 aa2.79□□□□□ -1.96
UBXN4-208ENST00000490163 HINT3Q9NQE9 182 aaKnown RBP2.79□□□□□ -1.96
UBXN4-208ENST00000490163 KLHL28Q9NXS3 571 aa2.79□□□□□ -1.96
UBXN4-208ENST00000490163 AKAP7Q9P0M2 348 aaPredicted RBP2.79□□□□□ -1.96
UBXN4-208ENST00000490163 SEPT10Q9P0V9 454 aa2.79□□□□□ -1.96
UBXN4-208ENST00000490163 PTBP2Q9UKA9 531 aaKnown RBP2.79□□□□□ -1.96
UBXN4-208ENST00000490163 PADI3Q9ULW8 664 aa2.79□□□□□ -1.96
UBXN4-208ENST00000490163 AK9Q5TCS8 1911 aa2.79□□□□□ -1.96
UBXN4-208ENST00000490163 DDX60Q8IY21 1712 aaKnown RBP2.79□□□□□ -1.96
UBXN4-208ENST00000490163 TTC21AQ8NDW8 1320 aa2.78□□□□□ -1.96
UBXN4-208ENST00000490163 GOLGA6L10A6NI86 522 aa2.78□□□□□ -1.96
UBXN4-208ENST00000490163 H0Y8G0 127 aa2.78□□□□□ -1.96
UBXN4-208ENST00000490163 HYAL3O43820 417 aaPredicted RBP2.78□□□□□ -1.96
UBXN4-208ENST00000490163 BCAR3O75815 825 aa2.78□□□□□ -1.96
UBXN4-208ENST00000490163 GAGE7O76087 117 aa2.78□□□□□ -1.96
UBXN4-208ENST00000490163 KIAA0754O94854 1291 aa2.78□□□□□ -1.96
UBXN4-208ENST00000490163 SPDEFO95238 335 aa2.78□□□□□ -1.96
UBXN4-208ENST00000490163 CLDN7O95471 211 aa2.78□□□□□ -1.96
UBXN4-208ENST00000490163 KRT6AP02538 564 aa2.78□□□□□ -1.96
UBXN4-208ENST00000490163 CYC1P08574 325 aa2.78□□□□□ -1.96
UBXN4-208ENST00000490163 GAGE12FP0CL80 117 aa2.78□□□□□ -1.96
UBXN4-208ENST00000490163 GAGE12GP0CL81 117 aa2.78□□□□□ -1.96
UBXN4-208ENST00000490163 GAGE12IP0CL82 117 aa2.78□□□□□ -1.96
UBXN4-208ENST00000490163 FERP16591 822 aa2.78□□□□□ -1.96
UBXN4-208ENST00000490163 BMP5P22003 454 aa2.78□□□□□ -1.96
UBXN4-208ENST00000490163 PRMT2P55345 433 aa2.78□□□□□ -1.96
UBXN4-208ENST00000490163 GAGE1Q13065 139 aa2.78□□□□□ -1.96
UBXN4-208ENST00000490163 GAGE4Q13068 117 aa2.78□□□□□ -1.96
UBXN4-208ENST00000490163 TP53BP2Q13625 1128 aa2.78□□□□□ -1.96
UBXN4-208ENST00000490163 ARHGAP19Q14CB8 494 aa2.78□□□□□ -1.96
UBXN4-208ENST00000490163 EFNB3Q15768 340 aa2.78□□□□□ -1.96
UBXN4-208ENST00000490163 ADPRMQ3LIE5 342 aa2.78□□□□□ -1.96
UBXN4-208ENST00000490163 FAM98BQ52LJ0 330 aaKnown RBP2.78□□□□□ -1.96
UBXN4-208ENST00000490163 C10orf76Q5T2E6 689 aa2.78□□□□□ -1.96
UBXN4-208ENST00000490163 HHATQ5VTY9 493 aa2.78□□□□□ -1.96
UBXN4-208ENST00000490163 ARHGAP17Q68EM7 881 aa2.78□□□□□ -1.96
UBXN4-208ENST00000490163 FIGLAQ6QHK4 219 aa2.78□□□□□ -1.96
UBXN4-208ENST00000490163 GRAMD2AQ8IUY3 354 aa2.78□□□□□ -1.96
UBXN4-208ENST00000490163 CCDC60Q8IWA6 550 aaPredicted RBP2.78□□□□□ -1.96
UBXN4-208ENST00000490163 ASB10Q8WXI3 467 aa2.78□□□□□ -1.96
UBXN4-208ENST00000490163 SMPDL3BQ92485 455 aa2.78□□□□□ -1.96
UBXN4-208ENST00000490163 FIG4Q92562 907 aa2.78□□□□□ -1.96
UBXN4-208ENST00000490163 PTERQ96BW5 349 aa2.78□□□□□ -1.96
UBXN4-208ENST00000490163 TMEM19Q96HH6 336 aa2.78□□□□□ -1.96
UBXN4-208ENST00000490163 CAPNS2Q96L46 248 aa2.78□□□□□ -1.96
UBXN4-208ENST00000490163 NSMCE2Q96MF7 247 aa2.78□□□□□ -1.96
UBXN4-208ENST00000490163 GDAP1L1Q96MZ0 367 aa2.78□□□□□ -1.96
UBXN4-208ENST00000490163 FTOQ9C0B1 505 aaKnown RBP eCLIP2.78□□□□□ -1.96
UBXN4-208ENST00000490163 IQCGQ9H095 443 aaKnown RBP2.78□□□□□ -1.96
UBXN4-208ENST00000490163 DPAGT1Q9H3H5 408 aa2.78□□□□□ -1.96
UBXN4-208ENST00000490163 FANCEQ9HB96 536 aa2.78□□□□□ -1.96
UBXN4-208ENST00000490163 GSN-AS1Q9NRJ2 163 aa2.78□□□□□ -1.96
UBXN4-208ENST00000490163 EXOC6BQ9Y2D4 811 aa2.78□□□□□ -1.96
UBXN4-208ENST00000490163 SLC4A4Q9Y6R1 1079 aa2.78□□□□□ -1.96
UBXN4-208ENST00000490163 COL5A2P05997 1499 aaPredicted RBP2.78□□□□□ -1.96
UBXN4-208ENST00000490163 LRRC37AA6NMS7 1700 aa2.78□□□□□ -1.96
UBXN4-208ENST00000490163 ARAP2Q8WZ64 1704 aa2.78□□□□□ -1.96
UBXN4-208ENST00000490163 ANKRD65E5RJM6 399 aa2.78□□□□□ -1.96
UBXN4-208ENST00000490163 NPIPA3F8WFD2 350 aa2.78□□□□□ -1.96
UBXN4-208ENST00000490163 I6L893 689 aaPredicted RBP2.78□□□□□ -1.96
UBXN4-208ENST00000490163 CES2O00748 559 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms