RNA–Protein interactions for RNA: ENST00000489728.1

CPSF7-212, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 488 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-212ENST00000489728 FKBP10Q96AY3 582 aa10.59□□□□□ -0.71
CPSF7-212ENST00000489728 ALKBH8Q96BT7 664 aaKnown RBP10.59□□□□□ -0.71
CPSF7-212ENST00000489728 WDR34Q96EX3 536 aa10.59□□□□□ -0.71
CPSF7-212ENST00000489728 PRAP1Q96NZ9 151 aa10.59□□□□□ -0.71
CPSF7-212ENST00000489728 GBP5Q96PP8 586 aa10.59□□□□□ -0.71
CPSF7-212ENST00000489728 MRPL57Q9BQC6 102 aaKnown RBP10.59□□□□□ -0.71
CPSF7-212ENST00000489728 AIF1LQ9BQI0 150 aa10.59□□□□□ -0.71
CPSF7-212ENST00000489728 CD244Q9BZW8 370 aa10.59□□□□□ -0.71
CPSF7-212ENST00000489728 ROPN1BQ9BZX4 212 aaPredicted RBP10.59□□□□□ -0.71
CPSF7-212ENST00000489728 UNKQ9C0B0 810 aaKnown RBP10.59□□□□□ -0.71
CPSF7-212ENST00000489728 SPRTNQ9H040 489 aaPredicted RBP10.59□□□□□ -0.71
CPSF7-212ENST00000489728 ROPN1Q9HAT0 212 aaPredicted RBP10.59□□□□□ -0.71
CPSF7-212ENST00000489728 CUTCQ9NTM9 273 aa10.59□□□□□ -0.71
CPSF7-212ENST00000489728 ABCF3Q9NUQ8 709 aa10.59□□□□□ -0.71
CPSF7-212ENST00000489728 DNAJC11Q9NVH1 559 aa10.59□□□□□ -0.71
CPSF7-212ENST00000489728 COPG2Q9UBF2 871 aa10.59□□□□□ -0.71
CPSF7-212ENST00000489728 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.59□□□□□ -0.71
CPSF7-212ENST00000489728 CROTQ9UKG9 612 aa10.59□□□□□ -0.71
CPSF7-212ENST00000489728 SLC22A14Q9Y267 594 aa10.59□□□□□ -0.71
CPSF7-212ENST00000489728 PCDHGA4Q9Y5G9 962 aa10.59□□□□□ -0.71
CPSF7-212ENST00000489728 TNPO3Q9Y5L0 923 aaKnown RBP10.59□□□□□ -0.71
CPSF7-212ENST00000489728 V9GYY5 206 aaPredicted RBP10.59□□□□□ -0.71
CPSF7-212ENST00000489728 ANKRD12Q6UB98 2062 aa10.59□□□□□ -0.71
CPSF7-212ENST00000489728 A0A0J9YVX5 310 aa10.58□□□□□ -0.72
CPSF7-212ENST00000489728 LOC101059948A0A1B0GTJ6 334 aa10.58□□□□□ -0.72
CPSF7-212ENST00000489728 HYKKA2RU49 373 aa10.58□□□□□ -0.72
CPSF7-212ENST00000489728 NCF1BA6NI72 391 aaPredicted RBP10.58□□□□□ -0.72
CPSF7-212ENST00000489728 ZNF891A8MT65 544 aaPredicted RBP10.58□□□□□ -0.72
CPSF7-212ENST00000489728 NCF1CA8MVU1 366 aaPredicted RBP10.58□□□□□ -0.72
CPSF7-212ENST00000489728 C9J4A7 227 aa10.58□□□□□ -0.72
CPSF7-212ENST00000489728 H0YGG7 62 aa10.58□□□□□ -0.72
CPSF7-212ENST00000489728 K7EPI3 171 aa10.58□□□□□ -0.72
CPSF7-212ENST00000489728 UBXN8O00124 270 aa10.58□□□□□ -0.72
CPSF7-212ENST00000489728 TAPBPO15533 448 aa10.58□□□□□ -0.72
CPSF7-212ENST00000489728 PRPF4O43172 522 aaKnown RBP eCLIP10.58□□□□□ -0.724e-7■■■■□ 25.3
CPSF7-212ENST00000489728 SHBGP04278 402 aa10.58□□□□□ -0.72
CPSF7-212ENST00000489728 SLC35G6P0C7Q6 338 aa10.58□□□□□ -0.72
CPSF7-212ENST00000489728 NCF1P14598 390 aaPredicted RBP10.58□□□□□ -0.72
CPSF7-212ENST00000489728 LIFP15018 202 aa10.58□□□□□ -0.72
CPSF7-212ENST00000489728 ITPKBP27987 946 aa10.58□□□□□ -0.72
CPSF7-212ENST00000489728 DLSTP36957 453 aa10.58□□□□□ -0.72
CPSF7-212ENST00000489728 GLRBP48167 497 aa10.58□□□□□ -0.72
CPSF7-212ENST00000489728 KCNC1P48547 511 aa10.58□□□□□ -0.72
CPSF7-212ENST00000489728 ARF3P61204 181 aaPredicted RBP10.58□□□□□ -0.72
CPSF7-212ENST00000489728 RPS15P62841 145 aaKnown RBP10.58□□□□□ -0.72
CPSF7-212ENST00000489728 DCDP81605 110 aaKnown RBP10.58□□□□□ -0.72
CPSF7-212ENST00000489728 REEP5Q00765 189 aa10.58□□□□□ -0.72
CPSF7-212ENST00000489728 DNASE1L3Q13609 305 aa10.58□□□□□ -0.72
CPSF7-212ENST00000489728 FAM53BQ14153 422 aa10.58□□□□□ -0.72
CPSF7-212ENST00000489728 E2F2Q14209 437 aa10.58□□□□□ -0.72
CPSF7-212ENST00000489728 NAA30Q147X3 362 aaPredicted RBP10.58□□□□□ -0.72
CPSF7-212ENST00000489728 PCBP2Q15366 365 aaKnown RBP eCLIP10.58□□□□□ -0.722e-8■■■■□ 20.7
CPSF7-212ENST00000489728 TBCCQ15814 346 aa10.58□□□□□ -0.72
CPSF7-212ENST00000489728 NDUFA9Q16795 377 aa10.58□□□□□ -0.72
CPSF7-212ENST00000489728 ATG9BQ674R7 924 aa10.58□□□□□ -0.72
CPSF7-212ENST00000489728 NIPAL1Q6NVV3 410 aa10.58□□□□□ -0.72
CPSF7-212ENST00000489728 NXPE4Q6UWF7 544 aa10.58□□□□□ -0.72
CPSF7-212ENST00000489728 SLCO4C1Q6ZQN7 724 aa10.58□□□□□ -0.72
CPSF7-212ENST00000489728 PLD6Q8N2A8 252 aaKnown RBP10.58□□□□□ -0.72
CPSF7-212ENST00000489728 CSNK1A1LQ8N752 337 aa10.58□□□□□ -0.72
CPSF7-212ENST00000489728 MFSD9Q8NBP5 474 aa10.58□□□□□ -0.72
CPSF7-212ENST00000489728 CAMKVQ8NCB2 501 aa10.58□□□□□ -0.72
CPSF7-212ENST00000489728 CT55Q8WUE5 264 aa10.58□□□□□ -0.72
CPSF7-212ENST00000489728 MR1Q95460 341 aa10.58□□□□□ -0.72
CPSF7-212ENST00000489728 EFCAB11Q9BUY7 163 aa10.58□□□□□ -0.72
CPSF7-212ENST00000489728 TMEM109Q9BVC6 243 aa10.58□□□□□ -0.72
CPSF7-212ENST00000489728 MRPL46Q9H2W6 279 aaKnown RBP10.58□□□□□ -0.72
CPSF7-212ENST00000489728 PRORYQ9H606 182 aa10.58□□□□□ -0.72
CPSF7-212ENST00000489728 NT5DC2Q9H857 520 aa10.58□□□□□ -0.72
CPSF7-212ENST00000489728 OPTCQ9UBM4 332 aa10.58□□□□□ -0.72
CPSF7-212ENST00000489728 CDC14AQ9UNH5 594 aa10.58□□□□□ -0.72
CPSF7-212ENST00000489728 SH2B3Q9UQQ2 575 aa10.58□□□□□ -0.72
CPSF7-212ENST00000489728 PADI2Q9Y2J8 665 aa10.58□□□□□ -0.72
CPSF7-212ENST00000489728 LOC105369274A0A096LPK9 316 aa10.57□□□□□ -0.72
CPSF7-212ENST00000489728 LOC102723532A0A0G2JNH3 316 aa10.57□□□□□ -0.72
CPSF7-212ENST00000489728 TEX51A0A1B0GUA7 166 aa10.57□□□□□ -0.72
CPSF7-212ENST00000489728 STX16-NPEPL1H3BU86 382 aa10.57□□□□□ -0.72
CPSF7-212ENST00000489728 STX16O14662 325 aa10.57□□□□□ -0.72
CPSF7-212ENST00000489728 MAP2K7O14733 419 aa10.57□□□□□ -0.72
CPSF7-212ENST00000489728 CLGNO14967 610 aa10.57□□□□□ -0.72
CPSF7-212ENST00000489728 EFSO43281 561 aa10.57□□□□□ -0.72
CPSF7-212ENST00000489728 NRP2O60462 931 aa10.57□□□□□ -0.72
CPSF7-212ENST00000489728 SMIM24O75264 130 aa10.57□□□□□ -0.72
CPSF7-212ENST00000489728 H2AFYO75367 372 aaKnown RBP10.57□□□□□ -0.72
CPSF7-212ENST00000489728 KATNA1O75449 491 aa10.57□□□□□ -0.72
CPSF7-212ENST00000489728 ERLIN1O75477 346 aa10.57□□□□□ -0.72
CPSF7-212ENST00000489728 ALBP02768 609 aa10.57□□□□□ -0.72
CPSF7-212ENST00000489728 C1GALT1C1LP0DN25 315 aa10.57□□□□□ -0.72
CPSF7-212ENST00000489728 GFAPP14136 432 aa10.57□□□□□ -0.72
CPSF7-212ENST00000489728 TCN2P20062 427 aa10.57□□□□□ -0.72
CPSF7-212ENST00000489728 PTPN4P29074 926 aa10.57□□□□□ -0.72
CPSF7-212ENST00000489728 HPDP32754 393 aaPredicted RBP10.57□□□□□ -0.72
CPSF7-212ENST00000489728 GMPRP36959 345 aa10.57□□□□□ -0.72
CPSF7-212ENST00000489728 CASP2P42575 452 aa10.57□□□□□ -0.72
CPSF7-212ENST00000489728 HSPA7P48741 367 aa10.57□□□□□ -0.72
CPSF7-212ENST00000489728 NFKB2Q00653 900 aa10.57□□□□□ -0.72
CPSF7-212ENST00000489728 IFFO1Q0D2I5 559 aa10.57□□□□□ -0.72
CPSF7-212ENST00000489728 LAPTM5Q13571 262 aa10.57□□□□□ -0.72
CPSF7-212ENST00000489728 PWP1Q13610 501 aa10.57□□□□□ -0.72
CPSF7-212ENST00000489728 NCF4Q15080 339 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms