RNA–Protein interactions for RNA: ENST00000489378.5

SSBP1-212, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 1,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-212ENST00000489378 FIGNQ5HY92 759 aa8.63□□□□□ -1.03
SSBP1-212ENST00000489378 E4F1Q66K89 784 aaPredicted RBP8.63□□□□□ -1.03
SSBP1-212ENST00000489378 CPEB2Q7Z5Q1 589 aaKnown RBP8.63□□□□□ -1.03
SSBP1-212ENST00000489378 CXorf67Q86X51 503 aaPredicted RBP8.63□□□□□ -1.03
SSBP1-212ENST00000489378 HORMAD2Q8N7B1 307 aa8.63□□□□□ -1.03
SSBP1-212ENST00000489378 OR13C4Q8NGS5 318 aa8.63□□□□□ -1.03
SSBP1-212ENST00000489378 FAM222BQ8WU58 562 aa8.63□□□□□ -1.03
SSBP1-212ENST00000489378 HEXDCQ8WVB3 486 aa8.63□□□□□ -1.03
SSBP1-212ENST00000489378 RAPGEF5Q92565 580 aa8.63□□□□□ -1.03
SSBP1-212ENST00000489378 MMABQ96EY8 250 aaPredicted RBP8.63□□□□□ -1.03
SSBP1-212ENST00000489378 TRIM11Q96F44 468 aa8.63□□□□□ -1.03
SSBP1-212ENST00000489378 OLFM3Q96PB7 478 aa8.63□□□□□ -1.03
SSBP1-212ENST00000489378 TTYH2Q9BSA4 534 aa8.63□□□□□ -1.03
SSBP1-212ENST00000489378 FICDQ9BVA6 458 aa8.63□□□□□ -1.03
SSBP1-212ENST00000489378 VN1R1Q9GZP7 353 aa8.63□□□□□ -1.03
SSBP1-212ENST00000489378 SYNPO2LQ9H987 977 aa8.63□□□□□ -1.03
SSBP1-212ENST00000489378 MKKSQ9NPJ1 570 aaPredicted RBP8.63□□□□□ -1.03
SSBP1-212ENST00000489378 PNPLA3Q9NST1 481 aa8.63□□□□□ -1.03
SSBP1-212ENST00000489378 CDC14AQ9UNH5 594 aa8.63□□□□□ -1.03
SSBP1-212ENST00000489378 PRSS21Q9Y6M0 314 aa8.63□□□□□ -1.03
SSBP1-212ENST00000489378 OR2W5A6NFC9 320 aa8.62□□□□□ -1.03
SSBP1-212ENST00000489378 TRIM64A6NGJ6 449 aa8.62□□□□□ -1.03
SSBP1-212ENST00000489378 TRIM64BA6NI03 449 aa8.62□□□□□ -1.03
SSBP1-212ENST00000489378 LGALS16A8MUM7 142 aa8.62□□□□□ -1.03
SSBP1-212ENST00000489378 TMEM229AB2RXF0 380 aa8.62□□□□□ -1.03
SSBP1-212ENST00000489378 TARM1B6A8C7 271 aa8.62□□□□□ -1.03
SSBP1-212ENST00000489378 LIN7AO14910 233 aaPredicted RBP8.62□□□□□ -1.03
SSBP1-212ENST00000489378 CRLF1O75462 422 aa8.62□□□□□ -1.03
SSBP1-212ENST00000489378 AGTP01019 485 aa8.62□□□□□ -1.03
SSBP1-212ENST00000489378 TPM2P07951 284 aa8.62□□□□□ -1.03
SSBP1-212ENST00000489378 ITGALP20701 1170 aa8.62□□□□□ -1.03
SSBP1-212ENST00000489378 PSMB5P28074 263 aa8.62□□□□□ -1.03
SSBP1-212ENST00000489378 UQCRC1P31930 480 aa8.62□□□□□ -1.03
SSBP1-212ENST00000489378 ADH7P40394 386 aa8.62□□□□□ -1.03
SSBP1-212ENST00000489378 TNNT3P45378 269 aaPredicted RBP8.62□□□□□ -1.03
SSBP1-212ENST00000489378 ZFP36L2P47974 494 aaKnown RBP8.62□□□□□ -1.03
SSBP1-212ENST00000489378 WASHC5Q12768 1159 aa8.62□□□□□ -1.03
SSBP1-212ENST00000489378 GRB7Q14451 532 aa8.62□□□□□ -1.03
SSBP1-212ENST00000489378 DAZAP2Q15038 168 aaPredicted RBP8.62□□□□□ -1.03
SSBP1-212ENST00000489378 GXYLT1Q4G148 440 aa8.62□□□□□ -1.03
SSBP1-212ENST00000489378 ARHGAP11AQ6P4F7 1023 aa8.62□□□□□ -1.03
SSBP1-212ENST00000489378 RNF44Q7L0R7 432 aa8.62□□□□□ -1.03
SSBP1-212ENST00000489378 WDR53Q7Z5U6 358 aaPredicted RBP8.62□□□□□ -1.03
SSBP1-212ENST00000489378 SNX20Q7Z614 316 aa8.62□□□□□ -1.03
SSBP1-212ENST00000489378 SERPINA9Q86WD7 417 aa8.62□□□□□ -1.03
SSBP1-212ENST00000489378 MAP7D3Q8IWC1 876 aa8.62□□□□□ -1.03
SSBP1-212ENST00000489378 POGLUT1Q8NBL1 392 aa8.62□□□□□ -1.03
SSBP1-212ENST00000489378 OR52N2Q8NGI0 321 aa8.62□□□□□ -1.03
SSBP1-212ENST00000489378 OR5M9Q8NGP3 310 aa8.62□□□□□ -1.03
SSBP1-212ENST00000489378 METTL21AQ8WXB1 218 aa8.62□□□□□ -1.03
SSBP1-212ENST00000489378 ELMO1Q92556 727 aa8.62□□□□□ -1.03
SSBP1-212ENST00000489378 SLCO2A1Q92959 643 aa8.62□□□□□ -1.03
SSBP1-212ENST00000489378 ZUFSPQ96AP4 578 aa8.62□□□□□ -1.03
SSBP1-212ENST00000489378 SLC22A18Q96BI1 424 aa8.62□□□□□ -1.03
SSBP1-212ENST00000489378 Q96MF0 132 aa8.62□□□□□ -1.03
SSBP1-212ENST00000489378 CYTH2Q99418 400 aa8.62□□□□□ -1.03
SSBP1-212ENST00000489378 MIPEPQ99797 713 aa8.62□□□□□ -1.03
SSBP1-212ENST00000489378 ISCUQ9H1K1 167 aa8.62□□□□□ -1.03
SSBP1-212ENST00000489378 CDCP1Q9H5V8 836 aa8.62□□□□□ -1.03
SSBP1-212ENST00000489378 FAM215AQ9Y5M1 114 aa8.62□□□□□ -1.03
SSBP1-212ENST00000489378 A0A0A6YYC8 382 aaPredicted RBP8.61□□□□□ -1.03
SSBP1-212ENST00000489378 SLC5A10A0PJK1 596 aa8.61□□□□□ -1.03
SSBP1-212ENST00000489378 C2orf81A6NN90 581 aa8.61□□□□□ -1.03
SSBP1-212ENST00000489378 NPIPA2E9PIF3 369 aa8.61□□□□□ -1.03
SSBP1-212ENST00000489378 NPIPA3F8WFD2 350 aa8.61□□□□□ -1.03
SSBP1-212ENST00000489378 H0YGG7 62 aa8.61□□□□□ -1.03
SSBP1-212ENST00000489378 I3L1I5 382 aaPredicted RBP8.61□□□□□ -1.03
SSBP1-212ENST00000489378 PPP1R12AO14974 1030 aaPredicted RBP8.61□□□□□ -1.03
SSBP1-212ENST00000489378 PRPF4O43172 522 aaKnown RBP eCLIP8.61□□□□□ -1.03
SSBP1-212ENST00000489378 ARHGEF9O43307 516 aa8.61□□□□□ -1.03
SSBP1-212ENST00000489378 FOXS1O43638 330 aa8.61□□□□□ -1.03
SSBP1-212ENST00000489378 GSTM1P09488 218 aa8.61□□□□□ -1.03
SSBP1-212ENST00000489378 ERVK-10P10266 1014 aa8.61□□□□□ -1.03
SSBP1-212ENST00000489378 KDELR1P24390 212 aa8.61□□□□□ -1.03
SSBP1-212ENST00000489378 ACRV1P26436 265 aa8.61□□□□□ -1.03
SSBP1-212ENST00000489378 ACVR2AP27037 513 aa8.61□□□□□ -1.03
SSBP1-212ENST00000489378 TPP2P29144 1249 aaPredicted RBP8.61□□□□□ -1.03
SSBP1-212ENST00000489378 ARF3P61204 181 aaPredicted RBP8.61□□□□□ -1.03
SSBP1-212ENST00000489378 GSTM4Q03013 218 aa8.61□□□□□ -1.03
SSBP1-212ENST00000489378 UBXN1Q04323 297 aa8.61□□□□□ -1.03
SSBP1-212ENST00000489378 HKDC1Q2TB90 917 aa8.61□□□□□ -1.03
SSBP1-212ENST00000489378 SLC25A35Q3KQZ1 300 aa8.61□□□□□ -1.03
SSBP1-212ENST00000489378 FBXW10Q5XX13 1052 aa8.61□□□□□ -1.03
SSBP1-212ENST00000489378 SLC9A4Q6AI14 798 aa8.61□□□□□ -1.03
SSBP1-212ENST00000489378 RTL6Q6ICC9 239 aa8.61□□□□□ -1.03
SSBP1-212ENST00000489378 HMBOX1Q6NT76 420 aa8.61□□□□□ -1.03
SSBP1-212ENST00000489378 ANKRD37Q7Z713 158 aa8.61□□□□□ -1.03
SSBP1-212ENST00000489378 SULF2Q8IWU5 870 aa8.61□□□□□ -1.03
SSBP1-212ENST00000489378 SLC5A8Q8N695 610 aa8.61□□□□□ -1.03
SSBP1-212ENST00000489378 OR2L8Q8NGY9 312 aa8.61□□□□□ -1.03
SSBP1-212ENST00000489378 C16orf52Q8NHV5 167 aa8.61□□□□□ -1.03
SSBP1-212ENST00000489378 M1APQ8TC57 530 aa8.61□□□□□ -1.03
SSBP1-212ENST00000489378 TMEM125Q96AQ2 219 aa8.61□□□□□ -1.03
SSBP1-212ENST00000489378 ERGIC2Q96RQ1 377 aa8.61□□□□□ -1.03
SSBP1-212ENST00000489378 ZFYVE21Q9BQ24 234 aa8.61□□□□□ -1.03
SSBP1-212ENST00000489378 PLCD4Q9BRC7 762 aa8.61□□□□□ -1.03
SSBP1-212ENST00000489378 DEFB127Q9H1M4 99 aa8.61□□□□□ -1.03
SSBP1-212ENST00000489378 MMP25Q9NPA2 562 aa8.61□□□□□ -1.03
SSBP1-212ENST00000489378 RUVBL1Q9Y265 456 aaKnown RBP8.61□□□□□ -1.03
SSBP1-212ENST00000489378 HEATR5BQ9P2D3 2071 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms