RNA–Protein interactions for RNA: ENST00000489180.6

NPHP4-209, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 5,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-209ENST00000489180 SNED1Q8TER0 1413 aa17.13■□□□□ 0.33
NPHP4-209ENST00000489180 ILVBLA1L0T0 632 aa17.13■□□□□ 0.33
NPHP4-209ENST00000489180 ANKRD66B4E2M5 251 aa17.13■□□□□ 0.33
NPHP4-209ENST00000489180 TFPTP0C1Z6 253 aa17.13■□□□□ 0.33
NPHP4-209ENST00000489180 MAP3K8P41279 467 aa17.13■□□□□ 0.33
NPHP4-209ENST00000489180 PGGT1BP53609 377 aa17.13■□□□□ 0.33
NPHP4-209ENST00000489180 IST1P53990 364 aa17.13■□□□□ 0.33
NPHP4-209ENST00000489180 RPL26P61254 145 aaKnown RBP17.13■□□□□ 0.33
NPHP4-209ENST00000489180 BTN3A2P78410 334 aa17.13■□□□□ 0.33
NPHP4-209ENST00000489180 ODF4Q2M2E3 257 aa17.13■□□□□ 0.33
NPHP4-209ENST00000489180 SMYD5Q6GMV2 418 aa17.13■□□□□ 0.33
NPHP4-209ENST00000489180 RNF6Q9Y252 685 aa17.13■□□□□ 0.33
NPHP4-209ENST00000489180 RFPL1O75677 317 aa17.12■□□□□ 0.33
NPHP4-209ENST00000489180 PCSK2P16519 638 aa17.12■□□□□ 0.33
NPHP4-209ENST00000489180 RPL10P27635 214 aaKnown RBP17.12■□□□□ 0.33
NPHP4-209ENST00000489180 SCNN1AP37088 669 aa17.12■□□□□ 0.33
NPHP4-209ENST00000489180 GALNT2Q10471 571 aa17.12■□□□□ 0.33
NPHP4-209ENST00000489180 SCGB2B2Q4G0G5 96 aa17.12■□□□□ 0.33
NPHP4-209ENST00000489180 TXNDC8Q6A555 127 aa17.12■□□□□ 0.33
NPHP4-209ENST00000489180 HSDL2Q6YN16 418 aa17.12■□□□□ 0.33
NPHP4-209ENST00000489180 CAMK1GQ96NX5 476 aa17.12■□□□□ 0.33
NPHP4-209ENST00000489180 TPT1P8Q9HAU6 139 aa17.12■□□□□ 0.33
NPHP4-209ENST00000489180 POLE4Q9NR33 117 aa17.12■□□□□ 0.33
NPHP4-209ENST00000489180 RBM47A0AV96 593 aaKnown RBP17.12■□□□□ 0.33
NPHP4-209ENST00000489180 OR1I1O60431 355 aa17.12■□□□□ 0.33
NPHP4-209ENST00000489180 ANKDD1AQ495B1 522 aa17.12■□□□□ 0.33
NPHP4-209ENST00000489180 MMAAQ8IVH4 418 aaKnown RBP17.12■□□□□ 0.33
NPHP4-209ENST00000489180 ZNF548Q8NEK5 533 aaPredicted RBP17.12■□□□□ 0.33
NPHP4-209ENST00000489180 SHISA4Q96DD7 197 aa17.12■□□□□ 0.33
NPHP4-209ENST00000489180 EFCAB11Q9BUY7 163 aa17.12■□□□□ 0.33
NPHP4-209ENST00000489180 OR51B5Q9H339 312 aa17.12■□□□□ 0.33
NPHP4-209ENST00000489180 SIRPGQ9P1W8 387 aa17.12■□□□□ 0.33
NPHP4-209ENST00000489180 A0A0J9YVX5 310 aa17.12■□□□□ 0.33
NPHP4-209ENST00000489180 C6orf47O95873 294 aa17.12■□□□□ 0.33
NPHP4-209ENST00000489180 FPR1P21462 350 aa17.12■□□□□ 0.33
NPHP4-209ENST00000489180 PTGS2P35354 604 aa17.12■□□□□ 0.33
NPHP4-209ENST00000489180 CTSOP43234 321 aaPredicted RBP17.12■□□□□ 0.33
NPHP4-209ENST00000489180 RPS13P62277 151 aaKnown RBP17.12■□□□□ 0.33
NPHP4-209ENST00000489180 TGFBIQ15582 683 aa17.12■□□□□ 0.33
NPHP4-209ENST00000489180 CEP68Q76N32 757 aa17.12■□□□□ 0.33
NPHP4-209ENST00000489180 ALPK1Q96QP1 1244 aa17.12■□□□□ 0.33
NPHP4-209ENST00000489180 DNAJC5Q9H3Z4 198 aa17.12■□□□□ 0.33
NPHP4-209ENST00000489180 PCDHGB7Q9Y5F8 929 aa17.12■□□□□ 0.33
NPHP4-209ENST00000489180 ACRP10323 421 aa17.12■□□□□ 0.33
NPHP4-209ENST00000489180 ITIH1P19827 911 aa17.12■□□□□ 0.33
NPHP4-209ENST00000489180 OR1E2P47887 323 aa17.12■□□□□ 0.33
NPHP4-209ENST00000489180 SMSP52788 366 aa17.12■□□□□ 0.33
NPHP4-209ENST00000489180 DIO3P55073 304 aa17.12■□□□□ 0.33
NPHP4-209ENST00000489180 MLLT10P55197 1068 aa17.12■□□□□ 0.33
NPHP4-209ENST00000489180 TAS2R50P59544 299 aa17.12■□□□□ 0.33
NPHP4-209ENST00000489180 HYAL2Q12891 473 aa17.12■□□□□ 0.33
NPHP4-209ENST00000489180 PTCHD3Q3KNS1 767 aa17.12■□□□□ 0.33
NPHP4-209ENST00000489180 ZNF773Q6PK81 442 aa17.12■□□□□ 0.33
NPHP4-209ENST00000489180 C2CD4AQ8NCU7 369 aaPredicted RBP17.12■□□□□ 0.33
NPHP4-209ENST00000489180 FCRL3Q96P31 734 aaPredicted RBP17.12■□□□□ 0.33
NPHP4-209ENST00000489180 CARS2Q9HA77 564 aaKnown RBP17.12■□□□□ 0.33
NPHP4-209ENST00000489180 RC3H2Q9HBD1 1191 aaKnown RBP17.12■□□□□ 0.33
NPHP4-209ENST00000489180 AKAP8O43823 692 aaKnown RBP17.11■□□□□ 0.33
NPHP4-209ENST00000489180 HMGN1P05114 100 aa17.11■□□□□ 0.33
NPHP4-209ENST00000489180 ZNF182P17025 639 aaPredicted RBP17.11■□□□□ 0.33
NPHP4-209ENST00000489180 SMOQ99835 787 aa17.11■□□□□ 0.33
NPHP4-209ENST00000489180 TTTY10Q9BZA0 68 aa17.11■□□□□ 0.33
NPHP4-209ENST00000489180 MLXQ9UH92 298 aa17.11■□□□□ 0.33
NPHP4-209ENST00000489180 ABCB7O75027 752 aa17.11■□□□□ 0.33
NPHP4-209ENST00000489180 UBXN7O94888 489 aa17.11■□□□□ 0.33
NPHP4-209ENST00000489180 ACTR1BP42025 376 aa17.11■□□□□ 0.33
NPHP4-209ENST00000489180 ENTPD1P49961 510 aa17.11■□□□□ 0.33
NPHP4-209ENST00000489180 STC1P52823 247 aa17.11■□□□□ 0.33
NPHP4-209ENST00000489180 ACTR1AP61163 376 aa17.11■□□□□ 0.33
NPHP4-209ENST00000489180 KLHL26Q53HC5 615 aa17.11■□□□□ 0.33
NPHP4-209ENST00000489180 MS4A13Q5J8X5 152 aa17.11■□□□□ 0.33
NPHP4-209ENST00000489180 ENPP7Q6UWV6 458 aa17.11■□□□□ 0.33
NPHP4-209ENST00000489180 SLC37A3Q8NCC5 494 aa17.11■□□□□ 0.33
NPHP4-209ENST00000489180 ISOC1Q96CN7 298 aa17.11■□□□□ 0.33
NPHP4-209ENST00000489180 ADAD1Q96M93 576 aaKnown RBP17.11■□□□□ 0.33
NPHP4-209ENST00000489180 WDR26Q9H7D7 661 aa17.11■□□□□ 0.33
NPHP4-209ENST00000489180 ITGA10O75578 1167 aa17.11■□□□□ 0.33
NPHP4-209ENST00000489180 PRKCZQ05513 592 aa17.11■□□□□ 0.33
NPHP4-209ENST00000489180 SMU1Q2TAY7 513 aa17.11■□□□□ 0.33
NPHP4-209ENST00000489180 LRRC66Q68CR7 880 aa17.11■□□□□ 0.33
NPHP4-209ENST00000489180 CENPSQ8N2Z9 138 aa17.11■□□□□ 0.33
NPHP4-209ENST00000489180 SLC22A17Q8WUG5 538 aa17.11■□□□□ 0.33
NPHP4-209ENST00000489180 ITM2CQ9NQX7 267 aa17.11■□□□□ 0.33
NPHP4-209ENST00000489180 HEBP2Q9Y5Z4 205 aa17.11■□□□□ 0.33
NPHP4-209ENST00000489180 LOC100509620A0A075B734 347 aa17.11■□□□□ 0.33
NPHP4-209ENST00000489180 FXYD6-FXYD2A0A087WZ82 144 aa17.11■□□□□ 0.33
NPHP4-209ENST00000489180 DUXAA6NLW8 204 aa17.11■□□□□ 0.33
NPHP4-209ENST00000489180 CHP2O43745 196 aa17.11■□□□□ 0.33
NPHP4-209ENST00000489180 MVKQ03426 396 aa17.11■□□□□ 0.33
NPHP4-209ENST00000489180 MOGQ16653 247 aa17.11■□□□□ 0.33
NPHP4-209ENST00000489180 GPALPP1Q8IXQ4 340 aa17.11■□□□□ 0.33
NPHP4-209ENST00000489180 ENDOVQ8N8Q3 282 aaKnown RBP17.11■□□□□ 0.33
NPHP4-209ENST00000489180 CNIH3Q8TBE1 160 aa17.11■□□□□ 0.33
NPHP4-209ENST00000489180 ACDQ96AP0 544 aa17.11■□□□□ 0.33
NPHP4-209ENST00000489180 SLC29A3Q9BZD2 475 aa17.11■□□□□ 0.33
NPHP4-209ENST00000489180 MAF1Q9H063 256 aa17.11■□□□□ 0.33
NPHP4-209ENST00000489180 FXYD6Q9H0Q3 95 aa17.11■□□□□ 0.33
NPHP4-209ENST00000489180 IRF2BPLQ9H1B7 796 aa17.11■□□□□ 0.33
NPHP4-209ENST00000489180 SMOC2Q9H3U7 446 aa17.11■□□□□ 0.33
NPHP4-209ENST00000489180 ALKBH4Q9NXW9 302 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms