RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 OR1D4P47884 311 aa13.62□□□□□ -0.23
BRCA1-218ENST00000489037 CCR8P51685 355 aa13.62□□□□□ -0.23
BRCA1-218ENST00000489037 CSNK1G2P78368 415 aa13.62□□□□□ -0.23
BRCA1-218ENST00000489037 COL9A2Q14055 689 aaPredicted RBP13.62□□□□□ -0.23
BRCA1-218ENST00000489037 TSNQ15631 228 aaKnown RBP13.62□□□□□ -0.23
BRCA1-218ENST00000489037 UAP1Q16222 522 aaPredicted RBP13.62□□□□□ -0.23
BRCA1-218ENST00000489037 MED25Q71SY5 747 aa13.62□□□□□ -0.23
BRCA1-218ENST00000489037 TBC1D1Q86TI0 1168 aaPredicted RBP13.62□□□□□ -0.23
BRCA1-218ENST00000489037 RELL1Q8IUW5 271 aa13.62□□□□□ -0.23
BRCA1-218ENST00000489037 PLD3Q8IV08 490 aa13.62□□□□□ -0.23
BRCA1-218ENST00000489037 TCAIMQ8N3R3 496 aa13.62□□□□□ -0.23
BRCA1-218ENST00000489037 TMEM102Q8N9M5 508 aaPredicted RBP13.62□□□□□ -0.23
BRCA1-218ENST00000489037 ADAMTS17Q8TE56 1095 aa13.62□□□□□ -0.23
BRCA1-218ENST00000489037 ANKRD49Q8WVL7 239 aa13.62□□□□□ -0.23
BRCA1-218ENST00000489037 MRRFQ96E11 262 aaKnown RBP13.62□□□□□ -0.23
BRCA1-218ENST00000489037 ABHD17AQ96GS6 310 aa13.62□□□□□ -0.23
BRCA1-218ENST00000489037 FER1L6-AS2Q96M78 137 aa13.62□□□□□ -0.23
BRCA1-218ENST00000489037 ING2Q9H160 280 aa13.62□□□□□ -0.23
BRCA1-218ENST00000489037 WDR54Q9H977 334 aa13.62□□□□□ -0.23
BRCA1-218ENST00000489037 RUVBL1Q9Y265 456 aaKnown RBP13.62□□□□□ -0.23
BRCA1-218ENST00000489037 KCNE2Q9Y6J6 123 aa13.62□□□□□ -0.23
BRCA1-218ENST00000489037 IKBKGQ9Y6K9 419 aa13.62□□□□□ -0.23
BRCA1-218ENST00000489037 MAU2Q9Y6X3 613 aa13.62□□□□□ -0.23
BRCA1-218ENST00000489037 ATMQ13315 3056 aa13.62□□□□□ -0.23
BRCA1-218ENST00000489037 KCNE1BA0A087WTH5 132 aa13.61□□□□□ -0.23
BRCA1-218ENST00000489037 FAM155BO75949 473 aa13.61□□□□□ -0.23
BRCA1-218ENST00000489037 AVPR1BP47901 424 aa13.61□□□□□ -0.23
BRCA1-218ENST00000489037 CCL11P51671 97 aa13.61□□□□□ -0.23
BRCA1-218ENST00000489037 PPP1R3AQ16821 1122 aa13.61□□□□□ -0.23
BRCA1-218ENST00000489037 HKDC1Q2TB90 917 aa13.61□□□□□ -0.23
BRCA1-218ENST00000489037 LACTB2Q53H82 288 aaPredicted RBP13.61□□□□□ -0.23
BRCA1-218ENST00000489037 FAM69BQ5VUD6 431 aa13.61□□□□□ -0.23
BRCA1-218ENST00000489037 TAOK1Q7L7X3 1001 aa13.61□□□□□ -0.23
BRCA1-218ENST00000489037 CCDC91Q7Z6B0 441 aa13.61□□□□□ -0.23
BRCA1-218ENST00000489037 THOC6Q86W42 341 aaKnown RBP13.61□□□□□ -0.23
BRCA1-218ENST00000489037 GPSM1Q86YR5 675 aa13.61□□□□□ -0.23
BRCA1-218ENST00000489037 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.61□□□□□ -0.23
BRCA1-218ENST00000489037 SLC5A11Q8WWX8 675 aa13.61□□□□□ -0.23
BRCA1-218ENST00000489037 NACC2Q96BF6 587 aa13.61□□□□□ -0.23
BRCA1-218ENST00000489037 MMABQ96EY8 250 aaPredicted RBP13.61□□□□□ -0.23
BRCA1-218ENST00000489037 DRC3Q9H069 523 aa13.61□□□□□ -0.23
BRCA1-218ENST00000489037 SLC26A1Q9H2B4 701 aa13.61□□□□□ -0.23
BRCA1-218ENST00000489037 CNOT10Q9H9A5 744 aaKnown RBP13.61□□□□□ -0.23
BRCA1-218ENST00000489037 NMRAL1Q9HBL8 299 aa13.61□□□□□ -0.23
BRCA1-218ENST00000489037 NINJ2Q9NZG7 142 aa13.61□□□□□ -0.23
BRCA1-218ENST00000489037 ZNF282Q9UDV7 671 aaPredicted RBP13.61□□□□□ -0.23
BRCA1-218ENST00000489037 IKZF3Q9UKT9 509 aa13.61□□□□□ -0.23
BRCA1-218ENST00000489037 TLN1Q9Y490 2541 aaKnown RBP13.61□□□□□ -0.23
BRCA1-218ENST00000489037 FEZF1A0PJY2 475 aa13.6□□□□□ -0.23
BRCA1-218ENST00000489037 KLHL41O60662 606 aa13.6□□□□□ -0.23
BRCA1-218ENST00000489037 H2AFYO75367 372 aaKnown RBP13.6□□□□□ -0.23
BRCA1-218ENST00000489037 C1QAP02745 245 aa13.6□□□□□ -0.23
BRCA1-218ENST00000489037 SLC35G6P0C7Q6 338 aa13.6□□□□□ -0.23
BRCA1-218ENST00000489037 CD1DP15813 335 aa13.6□□□□□ -0.23
BRCA1-218ENST00000489037 ATP1A4Q13733 1029 aa13.6□□□□□ -0.23
BRCA1-218ENST00000489037 FAM53BQ14153 422 aa13.6□□□□□ -0.23
BRCA1-218ENST00000489037 TGFBIQ15582 683 aa13.6□□□□□ -0.23
BRCA1-218ENST00000489037 ZKSCAN8Q15776 578 aaPredicted RBP13.6□□□□□ -0.23
BRCA1-218ENST00000489037 NKG7Q16617 165 aa13.6□□□□□ -0.23
BRCA1-218ENST00000489037 CDKL4Q5MAI5 379 aa13.6□□□□□ -0.23
BRCA1-218ENST00000489037 ASPGQ86U10 573 aa13.6□□□□□ -0.23
BRCA1-218ENST00000489037 SPATA6LQ8N4H0 392 aa13.6□□□□□ -0.23
BRCA1-218ENST00000489037 MFSD9Q8NBP5 474 aa13.6□□□□□ -0.23
BRCA1-218ENST00000489037 ABHD11Q8NFV4 315 aa13.6□□□□□ -0.23
BRCA1-218ENST00000489037 STAG3L4Q8TBR4 150 aa13.6□□□□□ -0.23
BRCA1-218ENST00000489037 SLC13A3Q8WWT9 602 aa13.6□□□□□ -0.23
BRCA1-218ENST00000489037 MIEF2Q96C03 454 aa13.6□□□□□ -0.23
BRCA1-218ENST00000489037 C10orf90Q96M02 699 aa13.6□□□□□ -0.23
BRCA1-218ENST00000489037 AIF1LQ9BQI0 150 aa13.6□□□□□ -0.23
BRCA1-218ENST00000489037 SLC25A23Q9BV35 468 aa13.6□□□□□ -0.23
BRCA1-218ENST00000489037 CAPS2Q9BXY5 557 aa13.6□□□□□ -0.23
BRCA1-218ENST00000489037 UNKQ9C0B0 810 aaKnown RBP13.6□□□□□ -0.23
BRCA1-218ENST00000489037 CDC42EP4Q9H3Q1 356 aaKnown RBP13.6□□□□□ -0.23
BRCA1-218ENST00000489037 ACSS3Q9H6R3 686 aa13.6□□□□□ -0.23
BRCA1-218ENST00000489037 PELI2Q9HAT8 420 aa13.6□□□□□ -0.23
BRCA1-218ENST00000489037 ZNF71Q9NQZ8 489 aaPredicted RBP13.6□□□□□ -0.23
BRCA1-218ENST00000489037 SLC22A11Q9NSA0 550 aa13.6□□□□□ -0.23
BRCA1-218ENST00000489037 WWOXQ9NZC7 414 aa13.6□□□□□ -0.23
BRCA1-218ENST00000489037 CD274Q9NZQ7 290 aa13.6□□□□□ -0.23
BRCA1-218ENST00000489037 RNF112Q9ULX5 631 aa13.6□□□□□ -0.23
BRCA1-218ENST00000489037 SLC22A14Q9Y267 594 aa13.6□□□□□ -0.23
BRCA1-218ENST00000489037 ACOT9Q9Y305 439 aa13.6□□□□□ -0.23
BRCA1-218ENST00000489037 NUP210LQ5VU65 1888 aa13.59□□□□□ -0.23
BRCA1-218ENST00000489037 A0A087X1B8 175 aa13.59□□□□□ -0.23
BRCA1-218ENST00000489037 TRBC2A0A5B9 178 aa13.59□□□□□ -0.23
BRCA1-218ENST00000489037 NCF1BA6NI72 391 aaPredicted RBP13.59□□□□□ -0.23
BRCA1-218ENST00000489037 NCF1CA8MVU1 366 aaPredicted RBP13.59□□□□□ -0.23
BRCA1-218ENST00000489037 OR1F1O43749 312 aa13.59□□□□□ -0.23
BRCA1-218ENST00000489037 WDR47O94967 919 aa13.59□□□□□ -0.23
BRCA1-218ENST00000489037 ACSL3O95573 720 aa13.59□□□□□ -0.23
BRCA1-218ENST00000489037 INHBAP08476 426 aa13.59□□□□□ -0.23
BRCA1-218ENST00000489037 LTA4HP09960 611 aaKnown RBP13.59□□□□□ -0.23
BRCA1-218ENST00000489037 NCF1P14598 390 aaPredicted RBP13.59□□□□□ -0.23
BRCA1-218ENST00000489037 CXCR2P25025 360 aa13.59□□□□□ -0.23
BRCA1-218ENST00000489037 SLC26A3P40879 764 aa13.59□□□□□ -0.23
BRCA1-218ENST00000489037 CHAF1BQ13112 559 aa13.59□□□□□ -0.23
BRCA1-218ENST00000489037 DSG2Q14126 1118 aa13.59□□□□□ -0.23
BRCA1-218ENST00000489037 EFTUD2Q15029 972 aaKnown RBP eCLIP13.59□□□□□ -0.23
BRCA1-218ENST00000489037 RBBP7Q16576 425 aa13.59□□□□□ -0.23
BRCA1-218ENST00000489037 MROH9Q5TGP6 573 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms