RNA–Protein interactions for RNA: ENST00000488353.2

RER1-207, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RER1, Length 2,469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-207ENST00000488353 SPEF1Q9Y4P9 236 aa13.79□□□□□ -0.2
RER1-207ENST00000488353 PCDHGC4Q9Y5F7 938 aa13.79□□□□□ -0.2
RER1-207ENST00000488353 KLK4Q9Y5K2 254 aa13.79□□□□□ -0.2
RER1-207ENST00000488353 E2F3O00716 465 aa13.79□□□□□ -0.2
RER1-207ENST00000488353 CTDSP2O14595 271 aa13.79□□□□□ -0.2
RER1-207ENST00000488353 POLR1CO15160 346 aaPredicted RBP13.79□□□□□ -0.2
RER1-207ENST00000488353 EPOP01588 193 aa13.79□□□□□ -0.2
RER1-207ENST00000488353 RFX2P48378 723 aa13.79□□□□□ -0.2
RER1-207ENST00000488353 YBEYP58557 167 aaPredicted RBP13.79□□□□□ -0.2
RER1-207ENST00000488353 OLR1P78380 273 aa13.79□□□□□ -0.2
RER1-207ENST00000488353 NPRL3Q12980 569 aa13.79□□□□□ -0.2
RER1-207ENST00000488353 SLAMF1Q13291 335 aa13.79□□□□□ -0.2
RER1-207ENST00000488353 GPR17Q13304 367 aa13.79□□□□□ -0.2
RER1-207ENST00000488353 CDONQ4KMG0 1287 aa13.79□□□□□ -0.2
RER1-207ENST00000488353 ZRANB3Q5FWF4 1079 aa13.79□□□□□ -0.2
RER1-207ENST00000488353 DEFB128Q7Z7B8 93 aa13.79□□□□□ -0.2
RER1-207ENST00000488353 GPSM1Q86YR5 675 aa13.79□□□□□ -0.2
RER1-207ENST00000488353 PHACTR4Q8IZ21 702 aa13.79□□□□□ -0.2
RER1-207ENST00000488353 CACTIN-AS1Q8N1I8 211 aa13.79□□□□□ -0.2
RER1-207ENST00000488353 NATD1Q8N6N6 113 aa13.79□□□□□ -0.2
RER1-207ENST00000488353 LPCAT1Q8NF37 534 aa13.79□□□□□ -0.2
RER1-207ENST00000488353 OR10Q1Q8NGQ4 319 aa13.79□□□□□ -0.2
RER1-207ENST00000488353 FAM120BQ96EK7 910 aaKnown RBP13.79□□□□□ -0.2
RER1-207ENST00000488353 CHCHD6Q9BRQ6 235 aa13.79□□□□□ -0.2
RER1-207ENST00000488353 CINPQ9BW66 212 aaPredicted RBP13.79□□□□□ -0.2
RER1-207ENST00000488353 ZNF717Q9BY31 904 aaPredicted RBP13.79□□□□□ -0.2
RER1-207ENST00000488353 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.79□□□□□ -0.2
RER1-207ENST00000488353 ELAC1Q9H777 363 aaKnown RBP13.79□□□□□ -0.2
RER1-207ENST00000488353 PDFQ9HBH1 243 aa13.79□□□□□ -0.2
RER1-207ENST00000488353 RANGRFQ9HD47 186 aaPredicted RBP13.79□□□□□ -0.2
RER1-207ENST00000488353 IL1RAPQ9NPH3 570 aa13.79□□□□□ -0.2
RER1-207ENST00000488353 PLCXD1Q9NUJ7 323 aa13.79□□□□□ -0.2
RER1-207ENST00000488353 SAMD4AQ9UPU9 718 aaKnown RBP13.79□□□□□ -0.2
RER1-207ENST00000488353 IL6P05231 212 aa13.78□□□□□ -0.2
RER1-207ENST00000488353 CAPN1P07384 714 aa13.78□□□□□ -0.2
RER1-207ENST00000488353 ATF6P18850 670 aa13.78□□□□□ -0.2
RER1-207ENST00000488353 SLC6A4P31645 630 aa13.78□□□□□ -0.2
RER1-207ENST00000488353 TUFMP49411 452 aaKnown RBP13.78□□□□□ -0.2
RER1-207ENST00000488353 RGS6P49758 472 aa13.78□□□□□ -0.2
RER1-207ENST00000488353 ARMCX4Q5H9R4 360 aa13.78□□□□□ -0.2
RER1-207ENST00000488353 AFTPHQ6ULP2 937 aa13.78□□□□□ -0.2
RER1-207ENST00000488353 ATG16L2Q8NAA4 619 aa13.78□□□□□ -0.2
RER1-207ENST00000488353 GLB1L3Q8NCI6 653 aaPredicted RBP13.78□□□□□ -0.2
RER1-207ENST00000488353 OR5H6Q8NGV6 325 aa13.78□□□□□ -0.2
RER1-207ENST00000488353 PEX13Q92968 403 aa13.78□□□□□ -0.2
RER1-207ENST00000488353 TRNT1Q96Q11 434 aaKnown RBP13.78□□□□□ -0.2
RER1-207ENST00000488353 ATP13A2Q9NQ11 1180 aa13.78□□□□□ -0.2
RER1-207ENST00000488353 DYRK4Q9NR20 520 aa13.78□□□□□ -0.2
RER1-207ENST00000488353 PCDH10Q9P2E7 1040 aa13.78□□□□□ -0.2
RER1-207ENST00000488353 TRMT6Q9UJA5 497 aaKnown RBP13.78□□□□□ -0.2
RER1-207ENST00000488353 ABCG2Q9UNQ0 655 aa13.78□□□□□ -0.2
RER1-207ENST00000488353 A0A075B6Q4 140 aa13.78□□□□□ -0.2
RER1-207ENST00000488353 A0A0G2JMP0 313 aa13.78□□□□□ -0.2
RER1-207ENST00000488353 F5H5T6 163 aa13.78□□□□□ -0.2
RER1-207ENST00000488353 TLR5O60602 858 aa13.78□□□□□ -0.2
RER1-207ENST00000488353 PGRP06401 933 aa13.78□□□□□ -0.2
RER1-207ENST00000488353 CDK1P06493 297 aa13.78□□□□□ -0.2
RER1-207ENST00000488353 COL6A1P12109 1028 aa13.78□□□□□ -0.2
RER1-207ENST00000488353 PKMP14618 531 aaKnown RBP13.78□□□□□ -0.2
RER1-207ENST00000488353 HOXD9P28356 352 aaPredicted RBP13.78□□□□□ -0.2
RER1-207ENST00000488353 MC4RP32245 332 aa13.78□□□□□ -0.2
RER1-207ENST00000488353 TNFSF8P32971 234 aa13.78□□□□□ -0.2
RER1-207ENST00000488353 HTR6P50406 440 aa13.78□□□□□ -0.2
RER1-207ENST00000488353 RPS24P62847 133 aaKnown RBP13.78□□□□□ -0.2
RER1-207ENST00000488353 MLIPQ5VWP3 458 aa13.78□□□□□ -0.2
RER1-207ENST00000488353 FAAH2Q6GMR7 532 aa13.78□□□□□ -0.2
RER1-207ENST00000488353 LETMD1Q6P1Q0 360 aa13.78□□□□□ -0.2
RER1-207ENST00000488353 IDO2Q6ZQW0 420 aa13.78□□□□□ -0.2
RER1-207ENST00000488353 ADAMTSL2Q86TH1 951 aa13.78□□□□□ -0.2
RER1-207ENST00000488353 CALHM3Q86XJ0 350 aa13.78□□□□□ -0.2
RER1-207ENST00000488353 NPAS4Q8IUM7 802 aa13.78□□□□□ -0.2
RER1-207ENST00000488353 CYP4Z2PQ8N1L4 340 aa13.78□□□□□ -0.2
RER1-207ENST00000488353 NKAPQ8N5F7 415 aaKnown RBP13.78□□□□□ -0.2
RER1-207ENST00000488353 NACC2Q96BF6 587 aa13.78□□□□□ -0.2
RER1-207ENST00000488353 FYTTD1Q96QD9 318 aaKnown RBP13.78□□□□□ -0.2
RER1-207ENST00000488353 C3orf14Q9HBI5 128 aa13.78□□□□□ -0.2
RER1-207ENST00000488353 ZFP37Q9Y6Q3 630 aaPredicted RBP13.78□□□□□ -0.2
RER1-207ENST00000488353 C2orf81A6NN90 581 aa13.77□□□□□ -0.21
RER1-207ENST00000488353 CLCA1A8K7I4 914 aa13.77□□□□□ -0.21
RER1-207ENST00000488353 PER2O15055 1255 aa13.77□□□□□ -0.21
RER1-207ENST00000488353 VPS26AO75436 327 aa13.77□□□□□ -0.21
RER1-207ENST00000488353 TSPAN12O95859 305 aa13.77□□□□□ -0.21
RER1-207ENST00000488353 SLC2A4P14672 509 aa13.77□□□□□ -0.21
RER1-207ENST00000488353 ERP29P30040 261 aaKnown RBP13.77□□□□□ -0.21
RER1-207ENST00000488353 MAPKAPK2P49137 400 aa13.77□□□□□ -0.21
RER1-207ENST00000488353 TARDBPQ13148 414 aaKnown RBP eCLIP13.77□□□□□ -0.21
RER1-207ENST00000488353 PTGR1Q14914 329 aa13.77□□□□□ -0.21
RER1-207ENST00000488353 GRAMD2AQ8IUY3 354 aa13.77□□□□□ -0.21
RER1-207ENST00000488353 HRASLS5Q96KN8 279 aa13.77□□□□□ -0.21
RER1-207ENST00000488353 PPP3R2Q96LZ3 170 aa13.77□□□□□ -0.21
RER1-207ENST00000488353 CEP295NLQ96MC4 621 aa13.77□□□□□ -0.21
RER1-207ENST00000488353 TTPALQ9BTX7 342 aa13.77□□□□□ -0.21
RER1-207ENST00000488353 CFHR5Q9BXR6 569 aa13.77□□□□□ -0.21
RER1-207ENST00000488353 DNMT3LQ9UJW3 386 aa13.77□□□□□ -0.21
RER1-207ENST00000488353 PLK4O00444 970 aa13.76□□□□□ -0.21
RER1-207ENST00000488353 TFECO14948 347 aaPredicted RBP13.76□□□□□ -0.21
RER1-207ENST00000488353 KIAA0513O60268 411 aa13.76□□□□□ -0.21
RER1-207ENST00000488353 CCNDBP1O95273 360 aa13.76□□□□□ -0.21
RER1-207ENST00000488353 ZNF682O95780 498 aa13.76□□□□□ -0.21
RER1-207ENST00000488353 PRLP01236 227 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms