RNA–Protein interactions for RNA: ENST00000487481.1

NME1-208, Transcript of NME/NM23 nucleoside diphosphate kinase 1, humanhuman

TSL 2

Gene NME1, Length 987 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME1-208ENST00000487481 CCDC50Q8IVM0 306 aa14.34□□□□□ -0.11
NME1-208ENST00000487481 CDKL3Q8IVW4 592 aaPredicted RBP14.34□□□□□ -0.11
NME1-208ENST00000487481 MYRIPQ8NFW9 859 aa14.34□□□□□ -0.11
NME1-208ENST00000487481 LKAAEAR1Q8TD35 194 aa14.34□□□□□ -0.11
NME1-208ENST00000487481 RERGQ96A58 199 aaPredicted RBP14.34□□□□□ -0.11
NME1-208ENST00000487481 RMND5BQ96G75 393 aaPredicted RBP14.34□□□□□ -0.11
NME1-208ENST00000487481 PLCD4Q9BRC7 762 aa14.34□□□□□ -0.11
NME1-208ENST00000487481 CARD6Q9BX69 1037 aa14.34□□□□□ -0.11
NME1-208ENST00000487481 POLDIP3Q9BY77 421 aaKnown RBP14.34□□□□□ -0.11
NME1-208ENST00000487481 ZNF358Q9NW07 568 aa14.34□□□□□ -0.11
NME1-208ENST00000487481 CCDC162PA2VCL2 907 aa14.33□□□□□ -0.12
NME1-208ENST00000487481 MROH6A6NGR9 719 aa14.33□□□□□ -0.12
NME1-208ENST00000487481 USP27XA6NNY8 438 aa14.33□□□□□ -0.12
NME1-208ENST00000487481 TXNDC9O14530 226 aa14.33□□□□□ -0.12
NME1-208ENST00000487481 TFECO14948 347 aaPredicted RBP14.33□□□□□ -0.12
NME1-208ENST00000487481 C1orf105O95561 183 aa14.33□□□□□ -0.12
NME1-208ENST00000487481 TPH1P17752 444 aa14.33□□□□□ -0.12
NME1-208ENST00000487481 BDKRB1P46663 353 aa14.33□□□□□ -0.12
NME1-208ENST00000487481 TAS2R50P59544 299 aa14.33□□□□□ -0.12
NME1-208ENST00000487481 SKOR2Q2VWA4 1001 aaPredicted RBP14.33□□□□□ -0.12
NME1-208ENST00000487481 MFSD4BQ5TF39 518 aa14.33□□□□□ -0.12
NME1-208ENST00000487481 KCTD11Q693B1 232 aa14.33□□□□□ -0.12
NME1-208ENST00000487481 ANKRD37Q7Z713 158 aa14.33□□□□□ -0.12
NME1-208ENST00000487481 KATNAL2Q8IYT4 538 aa14.33□□□□□ -0.12
NME1-208ENST00000487481 RCOR2Q8IZ40 523 aa14.33□□□□□ -0.12
NME1-208ENST00000487481 GSDMBQ8TAX9 411 aa14.33□□□□□ -0.12
NME1-208ENST00000487481 MBD6Q96DN6 1003 aa14.33□□□□□ -0.12
NME1-208ENST00000487481 SEC16BQ96JE7 1060 aa14.33□□□□□ -0.12
NME1-208ENST00000487481 REPIN1Q9BWE0 567 aaKnown RBP14.33□□□□□ -0.12
NME1-208ENST00000487481 SYNPO2LQ9H987 977 aa14.33□□□□□ -0.12
NME1-208ENST00000487481 SPATA7Q9P0W8 599 aa14.33□□□□□ -0.12
NME1-208ENST00000487481 PLEKHA6Q9Y2H5 1048 aa14.33□□□□□ -0.12
NME1-208ENST00000487481 L3MBTL1Q9Y468 752 aa14.33□□□□□ -0.12
NME1-208ENST00000487481 HRH3Q9Y5N1 445 aa14.33□□□□□ -0.12
NME1-208ENST00000487481 RTTNQ86VV8 2226 aa14.32□□□□□ -0.12
NME1-208ENST00000487481 ZNF407Q9C0G0 2248 aa14.32□□□□□ -0.12
NME1-208ENST00000487481 A0A0U1RQJ8 604 aa14.32□□□□□ -0.12
NME1-208ENST00000487481 SOWAHDA6NJG2 315 aa14.32□□□□□ -0.12
NME1-208ENST00000487481 H0YIG0 161 aa14.32□□□□□ -0.12
NME1-208ENST00000487481 PROM1O43490 865 aa14.32□□□□□ -0.12
NME1-208ENST00000487481 PKMP14618 531 aaKnown RBP14.32□□□□□ -0.12
NME1-208ENST00000487481 AOAHP28039 575 aa14.32□□□□□ -0.12
NME1-208ENST00000487481 CCNFP41002 786 aa14.32□□□□□ -0.12
NME1-208ENST00000487481 AVPR1BP47901 424 aa14.32□□□□□ -0.12
NME1-208ENST00000487481 MEOX1P50221 254 aa14.32□□□□□ -0.12
NME1-208ENST00000487481 YBX1P67809 324 aaKnown RBP14.32□□□□□ -0.12
NME1-208ENST00000487481 PTK6Q13882 451 aa14.32□□□□□ -0.12
NME1-208ENST00000487481 NDUFA9Q16795 377 aa14.32□□□□□ -0.12
NME1-208ENST00000487481 CCSMST1Q4G0I0 132 aa14.32□□□□□ -0.12
NME1-208ENST00000487481 CCDC181Q5TID7 509 aa14.32□□□□□ -0.12
NME1-208ENST00000487481 AFTPHQ6ULP2 937 aa14.32□□□□□ -0.12
NME1-208ENST00000487481 ACAD11Q709F0 780 aa14.32□□□□□ -0.12
NME1-208ENST00000487481 PAQR7Q86WK9 346 aa14.32□□□□□ -0.12
NME1-208ENST00000487481 CCDC71Q8IV32 467 aaPredicted RBP14.32□□□□□ -0.12
NME1-208ENST00000487481 MAGEC3Q8TD91 643 aa14.32□□□□□ -0.12
NME1-208ENST00000487481 NANOS1Q8WY41 292 aaKnown RBP14.32□□□□□ -0.12
NME1-208ENST00000487481 OR2A5Q96R48 311 aa14.32□□□□□ -0.12
NME1-208ENST00000487481 ACAT2Q9BWD1 397 aa14.32□□□□□ -0.12
NME1-208ENST00000487481 CLEC4MQ9H2X3 399 aaPredicted RBP14.32□□□□□ -0.12
NME1-208ENST00000487481 LIME1Q9H400 295 aa14.32□□□□□ -0.12
NME1-208ENST00000487481 LRRC40Q9H9A6 602 aa14.32□□□□□ -0.12
NME1-208ENST00000487481 MRPS30Q9NP92 439 aaKnown RBP14.32□□□□□ -0.12
NME1-208ENST00000487481 UTP6Q9NYH9 597 aaKnown RBP14.32□□□□□ -0.12
NME1-208ENST00000487481 TTC7AQ9ULT0 858 aaPredicted RBP14.32□□□□□ -0.12
NME1-208ENST00000487481 ALG6Q9Y672 507 aa14.32□□□□□ -0.12
NME1-208ENST00000487481 HRNRQ86YZ3 2850 aaPredicted RBP14.31□□□□□ -0.12
NME1-208ENST00000487481 MACROD2A1Z1Q3 448 aa14.31□□□□□ -0.12
NME1-208ENST00000487481 KRT87PA6NCN2 255 aa14.31□□□□□ -0.12
NME1-208ENST00000487481 IQCF5A8MTL0 148 aa14.31□□□□□ -0.12
NME1-208ENST00000487481 PRMT3O60678 531 aa14.31□□□□□ -0.12
NME1-208ENST00000487481 RBP3P10745 1247 aa14.31□□□□□ -0.12
NME1-208ENST00000487481 EZRP15311 586 aaKnown RBP14.31□□□□□ -0.12
NME1-208ENST00000487481 PPARGP37231 505 aaPredicted RBP14.31□□□□□ -0.12
NME1-208ENST00000487481 DGKQP52824 942 aa14.31□□□□□ -0.12
NME1-208ENST00000487481 ARHGAP11AQ6P4F7 1023 aa14.31□□□□□ -0.12
NME1-208ENST00000487481 PAPD4Q6PIY7 484 aaKnown RBP14.31□□□□□ -0.12
NME1-208ENST00000487481 CLEC17AQ6ZS10 378 aa14.31□□□□□ -0.12
NME1-208ENST00000487481 Q71RC1 249 aaPredicted RBP14.31□□□□□ -0.12
NME1-208ENST00000487481 CAMKMTQ7Z624 323 aa14.31□□□□□ -0.12
NME1-208ENST00000487481 ACTL9Q8TC94 416 aa14.31□□□□□ -0.12
NME1-208ENST00000487481 SKA2Q8WVK7 121 aaPredicted RBP14.31□□□□□ -0.12
NME1-208ENST00000487481 TMEM125Q96AQ2 219 aa14.31□□□□□ -0.12
NME1-208ENST00000487481 MDFIQ99750 246 aa14.31□□□□□ -0.12
NME1-208ENST00000487481 GPATCH1Q9BRR8 931 aaKnown RBP14.31□□□□□ -0.12
NME1-208ENST00000487481 HEMGNQ9BXL5 484 aa14.31□□□□□ -0.12
NME1-208ENST00000487481 TRIM45Q9H8W5 580 aaPredicted RBP14.31□□□□□ -0.12
NME1-208ENST00000487481 NFS1Q9Y697 457 aa14.31□□□□□ -0.12
NME1-208ENST00000487481 IGKV1-8A0A0C4DH67 115 aa14.3□□□□□ -0.12
NME1-208ENST00000487481 NDC80O14777 642 aa14.3□□□□□ -0.12
NME1-208ENST00000487481 P2RX6O15547 441 aa14.3□□□□□ -0.12
NME1-208ENST00000487481 AKR1B10O60218 316 aa14.3□□□□□ -0.12
NME1-208ENST00000487481 CDC40O60508 579 aaKnown RBP eCLIP14.3□□□□□ -0.12
NME1-208ENST00000487481 ZNF189O75820 626 aaPredicted RBP14.3□□□□□ -0.12
NME1-208ENST00000487481 NSA2O95478 260 aaKnown RBP14.3□□□□□ -0.12
NME1-208ENST00000487481 GOT2P00505 430 aaKnown RBP14.3□□□□□ -0.12
NME1-208ENST00000487481 ERGP11308 486 aa14.3□□□□□ -0.12
NME1-208ENST00000487481 TFEBP19484 476 aa14.3□□□□□ -0.12
NME1-208ENST00000487481 CYB561P49447 251 aa14.3□□□□□ -0.12
NME1-208ENST00000487481 NUP107P57740 925 aa14.3□□□□□ -0.12
NME1-208ENST00000487481 EIF3EP60228 445 aaKnown RBP14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms