RNA–Protein interactions for RNA: ENST00000487462.1

CDK11A-217, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 5

Gene CDK11A, Length 437 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-217ENST00000487462 CD68P34810 354 aaPredicted RBP8.86□□□□□ -0.99
CDK11A-217ENST00000487462 PRKCIP41743 596 aa8.86□□□□□ -0.99
CDK11A-217ENST00000487462 CHRNA4P43681 627 aa8.86□□□□□ -0.99
CDK11A-217ENST00000487462 GATA4P43694 442 aa8.86□□□□□ -0.99
CDK11A-217ENST00000487462 MTIF2P46199 727 aaKnown RBP8.86□□□□□ -0.99
CDK11A-217ENST00000487462 JAM2P57087 298 aa8.86□□□□□ -0.99
CDK11A-217ENST00000487462 VSX2P58304 361 aaPredicted RBP8.86□□□□□ -0.99
CDK11A-217ENST00000487462 ZBTB17Q13105 803 aa8.86□□□□□ -0.99
CDK11A-217ENST00000487462 ITGA9Q13797 1035 aa8.86□□□□□ -0.99
CDK11A-217ENST00000487462 CAPRIN1Q14444 709 aaKnown RBP8.86□□□□□ -0.99
CDK11A-217ENST00000487462 MESDQ14696 234 aa8.86□□□□□ -0.99
CDK11A-217ENST00000487462 KIR2DS3Q14952 304 aa8.86□□□□□ -0.99
CDK11A-217ENST00000487462 NOMO1Q15155 1222 aa8.86□□□□□ -0.99
CDK11A-217ENST00000487462 IFI16Q16666 785 aaKnown RBP8.86□□□□□ -0.99
CDK11A-217ENST00000487462 FIGNQ5HY92 759 aa8.86□□□□□ -0.99
CDK11A-217ENST00000487462 WASHC2DQ5SRD0 308 aa8.86□□□□□ -0.99
CDK11A-217ENST00000487462 C10orf62Q5T681 223 aaPredicted RBP8.86□□□□□ -0.99
CDK11A-217ENST00000487462 ZDHHC20Q5W0Z9 365 aa8.86□□□□□ -0.99
CDK11A-217ENST00000487462 FRMPD2BQ6IN97 320 aa8.86□□□□□ -0.99
CDK11A-217ENST00000487462 LANCL3Q6ZV70 420 aa8.86□□□□□ -0.99
CDK11A-217ENST00000487462 ZC3H7AQ8IWR0 971 aaKnown RBP8.86□□□□□ -0.99
CDK11A-217ENST00000487462 MCOLN2Q8IZK6 566 aa8.86□□□□□ -0.99
CDK11A-217ENST00000487462 C16orf52Q8NHV5 167 aa8.86□□□□□ -0.99
CDK11A-217ENST00000487462 HSPH1Q92598 858 aa8.86□□□□□ -0.99
CDK11A-217ENST00000487462 RNASE6Q93091 150 aaKnown RBP8.86□□□□□ -0.99
CDK11A-217ENST00000487462 TADA1Q96BN2 335 aa8.86□□□□□ -0.99
CDK11A-217ENST00000487462 NDST4Q9H3R1 872 aa8.86□□□□□ -0.99
CDK11A-217ENST00000487462 PCDH18Q9HCL0 1135 aa8.86□□□□□ -0.99
CDK11A-217ENST00000487462 PLAGL1Q9UM63 463 aa8.86□□□□□ -0.99
CDK11A-217ENST00000487462 PRKDCP78527 4128 aaKnown RBP8.86□□□□□ -0.99
CDK11A-217ENST00000487462 DYSFO75923 2080 aa8.85□□□□□ -0.99
CDK11A-217ENST00000487462 KIAA1549Q9HCM3 1950 aa8.85□□□□□ -0.99
CDK11A-217ENST00000487462 TMEM191CA6NGB0 347 aa8.85□□□□□ -0.99
CDK11A-217ENST00000487462 TUBAL3A6NHL2 446 aa8.85□□□□□ -0.99
CDK11A-217ENST00000487462 KCNK1O00180 336 aa8.85□□□□□ -0.99
CDK11A-217ENST00000487462 BIN1O00499 593 aa8.85□□□□□ -0.99
CDK11A-217ENST00000487462 DDX3XO00571 662 aaKnown RBP eCLIP8.85□□□□□ -0.99
CDK11A-217ENST00000487462 NRP2O60462 931 aa8.85□□□□□ -0.99
CDK11A-217ENST00000487462 DNAJB6O75190 326 aa8.85□□□□□ -0.99
CDK11A-217ENST00000487462 RNF8O76064 485 aa8.85□□□□□ -0.99
CDK11A-217ENST00000487462 C8orf89P0DMQ9 161 aa8.85□□□□□ -0.99
CDK11A-217ENST00000487462 SOX5P35711 763 aa8.85□□□□□ -0.99
CDK11A-217ENST00000487462 ASCL1P50553 236 aa8.85□□□□□ -0.99
CDK11A-217ENST00000487462 FBXL19-AS1Q494R0 122 aa8.85□□□□□ -0.99
CDK11A-217ENST00000487462 ZC3H12BQ5HYM0 836 aaKnown RBP8.85□□□□□ -0.99
CDK11A-217ENST00000487462 NCBP2-AS2Q69YL0 99 aa8.85□□□□□ -0.99
CDK11A-217ENST00000487462 ZNF585AQ6P3V2 769 aa8.85□□□□□ -0.99
CDK11A-217ENST00000487462 SLC13A5Q86YT5 568 aaPredicted RBP8.85□□□□□ -0.99
CDK11A-217ENST00000487462 SULF2Q8IWU5 870 aa8.85□□□□□ -0.99
CDK11A-217ENST00000487462 SHISA5Q8N114 240 aa8.85□□□□□ -0.99
CDK11A-217ENST00000487462 LMNTD1Q8N9Z9 388 aa8.85□□□□□ -0.99
CDK11A-217ENST00000487462 LINC01555Q8NAE3 123 aa8.85□□□□□ -0.99
CDK11A-217ENST00000487462 ZFP62Q8NB50 900 aaPredicted RBP8.85□□□□□ -0.99
CDK11A-217ENST00000487462 PPP1R14CQ8TAE6 165 aa8.85□□□□□ -0.99
CDK11A-217ENST00000487462 LINC01560Q8TB33 94 aa8.85□□□□□ -0.99
CDK11A-217ENST00000487462 PIGTQ969N2 578 aa8.85□□□□□ -0.99
CDK11A-217ENST00000487462 IMP4Q96G21 291 aaKnown RBP8.85□□□□□ -0.99
CDK11A-217ENST00000487462 PLCD4Q9BRC7 762 aa8.85□□□□□ -0.99
CDK11A-217ENST00000487462 GANQ9H2C0 597 aa8.85□□□□□ -0.99
CDK11A-217ENST00000487462 TRIM45Q9H8W5 580 aaPredicted RBP8.85□□□□□ -0.99
CDK11A-217ENST00000487462 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.85□□□□□ -0.99
CDK11A-217ENST00000487462 B4GALT7Q9UBV7 327 aa8.85□□□□□ -0.99
CDK11A-217ENST00000487462 A0A096LPE4 126 aa8.84□□□□□ -0.99
CDK11A-217ENST00000487462 LOC105369274A0A096LPK9 316 aa8.84□□□□□ -0.99
CDK11A-217ENST00000487462 LOC102723532A0A0G2JNH3 316 aa8.84□□□□□ -0.99
CDK11A-217ENST00000487462 A0A1W2PPZ6 126 aa8.84□□□□□ -0.99
CDK11A-217ENST00000487462 BUD23O43709 281 aaKnown RBP8.84□□□□□ -0.99
CDK11A-217ENST00000487462 NDST3O95803 873 aa8.84□□□□□ -0.99
CDK11A-217ENST00000487462 SLC26A3P40879 764 aa8.84□□□□□ -0.99
CDK11A-217ENST00000487462 SRSF2Q01130 221 aaKnown RBP8.84□□□□□ -0.99
CDK11A-217ENST00000487462 PAFAH1B3Q15102 231 aaKnown RBP8.84□□□□□ -0.99
CDK11A-217ENST00000487462 SYT16Q17RD7 645 aa8.84□□□□□ -0.99
CDK11A-217ENST00000487462 CHRFAM7AQ494W8 412 aa8.84□□□□□ -0.99
CDK11A-217ENST00000487462 FIGLAQ6QHK4 219 aa8.84□□□□□ -0.99
CDK11A-217ENST00000487462 CPEB2Q7Z5Q1 589 aaKnown RBP8.84□□□□□ -0.99
CDK11A-217ENST00000487462 OR4N4Q8N0Y3 316 aa8.84□□□□□ -0.99
CDK11A-217ENST00000487462 SLC5A8Q8N695 610 aa8.84□□□□□ -0.99
CDK11A-217ENST00000487462 MAPK1IP1LQ8NDC0 245 aa8.84□□□□□ -0.99
CDK11A-217ENST00000487462 ZNF398Q8TD17 642 aa8.84□□□□□ -0.99
CDK11A-217ENST00000487462 SRPK1Q96SB4 655 aaKnown RBP8.84□□□□□ -0.99
CDK11A-217ENST00000487462 ZFYVE21Q9BQ24 234 aa8.84□□□□□ -0.99
CDK11A-217ENST00000487462 YIPF2Q9BWQ6 316 aa8.84□□□□□ -0.99
CDK11A-217ENST00000487462 CEP41Q9BYV8 373 aa8.84□□□□□ -0.99
CDK11A-217ENST00000487462 VN1R1Q9GZP7 353 aa8.84□□□□□ -0.99
CDK11A-217ENST00000487462 DEFB127Q9H1M4 99 aa8.84□□□□□ -0.99
CDK11A-217ENST00000487462 MMP25Q9NPA2 562 aa8.84□□□□□ -0.99
CDK11A-217ENST00000487462 MKKSQ9NPJ1 570 aaPredicted RBP8.84□□□□□ -0.99
CDK11A-217ENST00000487462 ZC3H7BQ9UGR2 993 aaKnown RBP8.84□□□□□ -0.99
CDK11A-217ENST00000487462 TDRKHQ9Y2W6 561 aaKnown RBP8.84□□□□□ -0.99
CDK11A-217ENST00000487462 NPFFR2Q9Y5X5 522 aa8.84□□□□□ -0.99
CDK11A-217ENST00000487462 HEATR5AQ86XA9 2040 aa8.83□□□□□ -1
CDK11A-217ENST00000487462 A0A087X1B8 175 aa8.83□□□□□ -1
CDK11A-217ENST00000487462 EPHB6O15197 1021 aa8.83□□□□□ -1
CDK11A-217ENST00000487462 SRPX2O60687 465 aaPredicted RBP8.83□□□□□ -1
CDK11A-217ENST00000487462 STATHP02808 62 aa8.83□□□□□ -1
CDK11A-217ENST00000487462 CD48P09326 243 aa8.83□□□□□ -1
CDK11A-217ENST00000487462 FAM157CP0CG43 387 aa8.83□□□□□ -1
CDK11A-217ENST00000487462 ACADLP28330 430 aa8.83□□□□□ -1
CDK11A-217ENST00000487462 TPP2P29144 1249 aaPredicted RBP8.83□□□□□ -1
CDK11A-217ENST00000487462 PKLRP30613 574 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms