RNA–Protein interactions for RNA: ENST00000487401.1

SREBF1-215, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-215ENST00000487401 RPS15AP62244 130 aaKnown RBP11.82□□□□□ -0.52
SREBF1-215ENST00000487401 ARG2P78540 354 aa11.82□□□□□ -0.52
SREBF1-215ENST00000487401 DHX9Q08211 1270 aaKnown RBP11.82□□□□□ -0.52
SREBF1-215ENST00000487401 FAM53BQ14153 422 aa11.82□□□□□ -0.52
SREBF1-215ENST00000487401 BBS9Q3SYG4 887 aa11.82□□□□□ -0.52
SREBF1-215ENST00000487401 SPANXN3Q5MJ09 141 aa11.82□□□□□ -0.52
SREBF1-215ENST00000487401 B3GNTL1Q67FW5 361 aaPredicted RBP11.82□□□□□ -0.52
SREBF1-215ENST00000487401 C17orf64Q86WR6 236 aa11.82□□□□□ -0.52
SREBF1-215ENST00000487401 EEF1AKMT1Q8WVE0 214 aa11.82□□□□□ -0.52
SREBF1-215ENST00000487401 METTL21AQ8WXB1 218 aa11.82□□□□□ -0.52
SREBF1-215ENST00000487401 ALKBH8Q96BT7 664 aaKnown RBP11.82□□□□□ -0.52
SREBF1-215ENST00000487401 THAP11Q96EK4 314 aa11.82□□□□□ -0.52
SREBF1-215ENST00000487401 HIST1H2AHQ96KK5 128 aa11.82□□□□□ -0.52
SREBF1-215ENST00000487401 HIST1H2AJQ99878 128 aa11.82□□□□□ -0.52
SREBF1-215ENST00000487401 H2AFJQ9BTM1 129 aa11.82□□□□□ -0.52
SREBF1-215ENST00000487401 SYNPO2LQ9H987 977 aa11.82□□□□□ -0.52
SREBF1-215ENST00000487401 PARVBQ9HBI1 364 aa11.82□□□□□ -0.52
SREBF1-215ENST00000487401 PPANQ9NQ55 473 aaKnown RBP11.82□□□□□ -0.52
SREBF1-215ENST00000487401 RIC8BQ9NVN3 520 aa11.82□□□□□ -0.52
SREBF1-215ENST00000487401 TRMT1Q9NXH9 659 aaKnown RBP11.82□□□□□ -0.52
SREBF1-215ENST00000487401 PTGFRNQ9P2B2 879 aa11.82□□□□□ -0.52
SREBF1-215ENST00000487401 MKL2Q9ULH7 1088 aa11.82□□□□□ -0.52
SREBF1-215ENST00000487401 SLC5A6Q9Y289 635 aa11.82□□□□□ -0.52
SREBF1-215ENST00000487401 NTNG1Q9Y2I2 539 aa11.82□□□□□ -0.52
SREBF1-215ENST00000487401 PTPN13Q12923 2485 aa11.82□□□□□ -0.52
SREBF1-215ENST00000487401 KCNE1BA0A087WTH5 132 aa11.81□□□□□ -0.52
SREBF1-215ENST00000487401 IGHV1-45A0A0A0MS14 117 aa11.81□□□□□ -0.52
SREBF1-215ENST00000487401 A1L4Q6 167 aa11.81□□□□□ -0.52
SREBF1-215ENST00000487401 DYTNA2CJ06 578 aa11.81□□□□□ -0.52
SREBF1-215ENST00000487401 H0YIG0 161 aa11.81□□□□□ -0.52
SREBF1-215ENST00000487401 P2RX6O15547 441 aa11.81□□□□□ -0.52
SREBF1-215ENST00000487401 KLHL18O94889 574 aa11.81□□□□□ -0.52
SREBF1-215ENST00000487401 BMP10O95393 424 aa11.81□□□□□ -0.52
SREBF1-215ENST00000487401 STATHP02808 62 aa11.81□□□□□ -0.52
SREBF1-215ENST00000487401 PRR35P0CG20 571 aa11.81□□□□□ -0.52
SREBF1-215ENST00000487401 ICAM2P13598 275 aa11.81□□□□□ -0.52
SREBF1-215ENST00000487401 GRK3P35626 688 aa11.81□□□□□ -0.52
SREBF1-215ENST00000487401 TBPL1P62380 186 aa11.81□□□□□ -0.52
SREBF1-215ENST00000487401 AP2B1P63010 937 aa11.81□□□□□ -0.52
SREBF1-215ENST00000487401 MAT1AQ00266 395 aaKnown RBP11.81□□□□□ -0.52
SREBF1-215ENST00000487401 SP140Q13342 867 aa11.81□□□□□ -0.52
SREBF1-215ENST00000487401 NAE1Q13564 534 aa11.81□□□□□ -0.52
SREBF1-215ENST00000487401 HIST2H2BCQ6DN03 193 aa11.81□□□□□ -0.52
SREBF1-215ENST00000487401 AGTRAPQ6RW13 159 aa11.81□□□□□ -0.52
SREBF1-215ENST00000487401 PAQR3Q6TCH7 311 aa11.81□□□□□ -0.52
SREBF1-215ENST00000487401 KIAA0408Q6ZU52 694 aa11.81□□□□□ -0.52
SREBF1-215ENST00000487401 ARHGEF39Q8N4T4 335 aa11.81□□□□□ -0.52
SREBF1-215ENST00000487401 AMER3Q8N944 861 aa11.81□□□□□ -0.52
SREBF1-215ENST00000487401 CAMKVQ8NCB2 501 aa11.81□□□□□ -0.52
SREBF1-215ENST00000487401 ST6GALNAC3Q8NDV1 305 aa11.81□□□□□ -0.52
SREBF1-215ENST00000487401 CATSPER1Q8NEC5 780 aa11.81□□□□□ -0.52
SREBF1-215ENST00000487401 OR1N1Q8NGS0 311 aa11.81□□□□□ -0.52
SREBF1-215ENST00000487401 BRIX1Q8TDN6 353 aaKnown RBP11.81□□□□□ -0.52
SREBF1-215ENST00000487401 GRHL3Q8TE85 626 aa11.81□□□□□ -0.52
SREBF1-215ENST00000487401 LINGO1Q96FE5 620 aa11.81□□□□□ -0.52
SREBF1-215ENST00000487401 C5orf34Q96MH7 638 aa11.81□□□□□ -0.52
SREBF1-215ENST00000487401 BARD1Q99728 777 aaKnown RBP11.81□□□□□ -0.52
SREBF1-215ENST00000487401 TRIM54Q9BYV2 358 aa11.81□□□□□ -0.52
SREBF1-215ENST00000487401 DDX47Q9H0S4 455 aaKnown RBP11.81□□□□□ -0.52
SREBF1-215ENST00000487401 ATG10Q9H0Y0 220 aa11.81□□□□□ -0.52
SREBF1-215ENST00000487401 PLA2G3Q9NZ20 509 aa11.81□□□□□ -0.52
SREBF1-215ENST00000487401 ADAMTS6Q9UKP5 1117 aa11.81□□□□□ -0.52
SREBF1-215ENST00000487401 PDE10AQ9Y233 779 aa11.81□□□□□ -0.52
SREBF1-215ENST00000487401 PCSK5Q92824 1860 aa11.8□□□□□ -0.52
SREBF1-215ENST00000487401 BANF1O75531 89 aa11.8□□□□□ -0.52
SREBF1-215ENST00000487401 AHSGP02765 367 aa11.8□□□□□ -0.52
SREBF1-215ENST00000487401 RNF224P0DH78 156 aa11.8□□□□□ -0.52
SREBF1-215ENST00000487401 C8orf89P0DMQ9 161 aa11.8□□□□□ -0.52
SREBF1-215ENST00000487401 TCP1P17987 556 aaKnown RBP11.8□□□□□ -0.52
SREBF1-215ENST00000487401 CCND1P24385 295 aa11.8□□□□□ -0.52
SREBF1-215ENST00000487401 CDKN2DP55273 166 aa11.8□□□□□ -0.52
SREBF1-215ENST00000487401 IL2P60568 153 aa11.8□□□□□ -0.52
SREBF1-215ENST00000487401 CSNK1G2P78368 415 aa11.8□□□□□ -0.52
SREBF1-215ENST00000487401 PDAP1Q13442 181 aaKnown RBP11.8□□□□□ -0.52
SREBF1-215ENST00000487401 SYT16Q17RD7 645 aa11.8□□□□□ -0.52
SREBF1-215ENST00000487401 MINDY4Q4G0A6 757 aa11.8□□□□□ -0.52
SREBF1-215ENST00000487401 MFSD4BQ5TF39 518 aa11.8□□□□□ -0.52
SREBF1-215ENST00000487401 FAM180AQ6UWF9 173 aa11.8□□□□□ -0.52
SREBF1-215ENST00000487401 RIPOR1Q6ZS17 1223 aa11.8□□□□□ -0.52
SREBF1-215ENST00000487401 ZC3H7AQ8IWR0 971 aaKnown RBP11.8□□□□□ -0.52
SREBF1-215ENST00000487401 PDIK1LQ8N165 341 aa11.8□□□□□ -0.52
SREBF1-215ENST00000487401 SIRT6Q8N6T7 355 aa11.8□□□□□ -0.52
SREBF1-215ENST00000487401 OR9A4Q8NGU2 314 aa11.8□□□□□ -0.52
SREBF1-215ENST00000487401 FAR1Q8WVX9 515 aa11.8□□□□□ -0.52
SREBF1-215ENST00000487401 CFAP36Q96G28 342 aa11.8□□□□□ -0.52
SREBF1-215ENST00000487401 MAGEB10Q96LZ2 347 aaPredicted RBP11.8□□□□□ -0.52
SREBF1-215ENST00000487401 MACROD1Q9BQ69 325 aa11.8□□□□□ -0.52
SREBF1-215ENST00000487401 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.8□□□□□ -0.52
SREBF1-215ENST00000487401 ZNF700Q9H0M5 742 aa11.8□□□□□ -0.52
SREBF1-215ENST00000487401 ANKHQ9HCJ1 492 aa11.8□□□□□ -0.52
SREBF1-215ENST00000487401 RRAGDQ9NQL2 400 aaPredicted RBP11.8□□□□□ -0.52
SREBF1-215ENST00000487401 ERRFI1Q9UJM3 462 aaPredicted RBP11.8□□□□□ -0.52
SREBF1-215ENST00000487401 MRPS2Q9Y399 296 aaKnown RBP11.8□□□□□ -0.52
SREBF1-215ENST00000487401 USP9YO00507 2555 aaPredicted RBP11.79□□□□□ -0.52
SREBF1-215ENST00000487401 LOC102723996A0A087X1L8 192 aa11.79□□□□□ -0.52
SREBF1-215ENST00000487401 TRAV17A0A0B4J275 112 aa11.79□□□□□ -0.52
SREBF1-215ENST00000487401 A0A1W2PQ72 361 aa11.79□□□□□ -0.52
SREBF1-215ENST00000487401 NSA2O95478 260 aaKnown RBP11.79□□□□□ -0.52
SREBF1-215ENST00000487401 MYBL2P10244 700 aa11.79□□□□□ -0.52
SREBF1-215ENST00000487401 EDN3P14138 238 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms