RNA–Protein interactions for RNA: ENST00000487386.1

LINC00888-204, long intergenic non-protein coding RNA 888, humanhuman

BASIC

Gene LINC00888, Length 421 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00888-204ENST00000487386 CLTCL1P53675 1640 aa3.49□□□□□ -1.85
LINC00888-204ENST00000487386 TRBV5-5A0A0J9YX44 114 aa3.49□□□□□ -1.85
LINC00888-204ENST00000487386 A0A1B0GVY2 172 aa3.49□□□□□ -1.85
LINC00888-204ENST00000487386 A0A1W2PR80 420 aa3.49□□□□□ -1.85
LINC00888-204ENST00000487386 MPTX1A8MV57 137 aa3.49□□□□□ -1.85
LINC00888-204ENST00000487386 KPNA7A9QM74 516 aa3.49□□□□□ -1.85
LINC00888-204ENST00000487386 C2CD4DB7Z1M9 353 aa3.49□□□□□ -1.85
LINC00888-204ENST00000487386 KRT33AO76009 404 aa3.49□□□□□ -1.85
LINC00888-204ENST00000487386 CELF2O95319 508 aaKnown RBP3.49□□□□□ -1.85
LINC00888-204ENST00000487386 UGT1A4P22310 534 aa3.49□□□□□ -1.85
LINC00888-204ENST00000487386 SP100P23497 879 aaPredicted RBP3.49□□□□□ -1.85
LINC00888-204ENST00000487386 MC5RP33032 325 aa3.49□□□□□ -1.85
LINC00888-204ENST00000487386 MMP12P39900 470 aa3.49□□□□□ -1.85
LINC00888-204ENST00000487386 CAPZA2P47755 286 aa3.49□□□□□ -1.85
LINC00888-204ENST00000487386 LMO4P61968 165 aa3.49□□□□□ -1.85
LINC00888-204ENST00000487386 GUCY2DQ02846 1103 aa3.49□□□□□ -1.85
LINC00888-204ENST00000487386 ARMC4Q5T2S8 1044 aa3.49□□□□□ -1.85
LINC00888-204ENST00000487386 LYSMD4Q5XG99 296 aa3.49□□□□□ -1.85
LINC00888-204ENST00000487386 DOK6Q6PKX4 331 aa3.49□□□□□ -1.85
LINC00888-204ENST00000487386 ZBTB49Q6ZSB9 765 aa3.49□□□□□ -1.85
LINC00888-204ENST00000487386 DET1Q7L5Y6 550 aa3.49□□□□□ -1.85
LINC00888-204ENST00000487386 KRT74Q7RTS7 529 aa3.49□□□□□ -1.85
LINC00888-204ENST00000487386 LRRTM1Q86UE6 522 aa3.49□□□□□ -1.85
LINC00888-204ENST00000487386 TDRD5Q8NAT2 981 aaKnown RBP3.49□□□□□ -1.85
LINC00888-204ENST00000487386 ZNF486Q96H40 463 aaPredicted RBP3.49□□□□□ -1.85
LINC00888-204ENST00000487386 ZNF300Q96RE9 604 aaPredicted RBP3.49□□□□□ -1.85
LINC00888-204ENST00000487386 MAP3K3Q99759 626 aa3.49□□□□□ -1.85
LINC00888-204ENST00000487386 NKX3-1Q99801 234 aaPredicted RBP3.49□□□□□ -1.85
LINC00888-204ENST00000487386 SLC2A11Q9BYW1 496 aa3.49□□□□□ -1.85
LINC00888-204ENST00000487386 PANK2Q9BZ23 570 aa3.49□□□□□ -1.85
LINC00888-204ENST00000487386 WDR35Q9P2L0 1181 aa3.49□□□□□ -1.85
LINC00888-204ENST00000487386 SCAPERQ9BY12 1400 aa3.49□□□□□ -1.85
LINC00888-204ENST00000487386 CLTCQ00610 1675 aaKnown RBP3.49□□□□□ -1.85
LINC00888-204ENST00000487386 VWDEQ8N2E2 1590 aa3.48□□□□□ -1.85
LINC00888-204ENST00000487386 NCOA1Q15788 1441 aa3.48□□□□□ -1.85
LINC00888-204ENST00000487386 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.48□□□□□ -1.85
LINC00888-204ENST00000487386 EPM2AB3EWF7 344 aa3.48□□□□□ -1.85
LINC00888-204ENST00000487386 H0YAE9 185 aa3.48□□□□□ -1.85
LINC00888-204ENST00000487386 CLDN4O14493 209 aa3.48□□□□□ -1.85
LINC00888-204ENST00000487386 FPGTO14772 594 aa3.48□□□□□ -1.85
LINC00888-204ENST00000487386 TEX28O15482 410 aa3.48□□□□□ -1.85
LINC00888-204ENST00000487386 MAGEC1O60732 1142 aa3.48□□□□□ -1.85
LINC00888-204ENST00000487386 ATP6AP2O75787 350 aa3.48□□□□□ -1.85
LINC00888-204ENST00000487386 SLCO2B1O94956 709 aa3.48□□□□□ -1.85
LINC00888-204ENST00000487386 ACSL3O95573 720 aa3.48□□□□□ -1.85
LINC00888-204ENST00000487386 FYNP06241 537 aa3.48□□□□□ -1.85
LINC00888-204ENST00000487386 LDHCP07864 332 aa3.48□□□□□ -1.85
LINC00888-204ENST00000487386 OR52Z1P0C646 297 aa3.48□□□□□ -1.85
LINC00888-204ENST00000487386 TRIM49P0CI25 452 aa3.48□□□□□ -1.85
LINC00888-204ENST00000487386 TRIM49CP0CI26 452 aa3.48□□□□□ -1.85
LINC00888-204ENST00000487386 LHCGRP22888 699 aa3.48□□□□□ -1.85
LINC00888-204ENST00000487386 CYCSP99999 105 aaKnown RBP3.48□□□□□ -1.85
LINC00888-204ENST00000487386 RBPJQ06330 500 aa3.48□□□□□ -1.85
LINC00888-204ENST00000487386 ACSM1Q08AH1 577 aa3.48□□□□□ -1.85
LINC00888-204ENST00000487386 AIMP1Q12904 312 aaKnown RBP3.48□□□□□ -1.85
LINC00888-204ENST00000487386 NFATC2Q13469 925 aa3.48□□□□□ -1.85
LINC00888-204ENST00000487386 EFTUD2Q15029 972 aaKnown RBP eCLIP3.48□□□□□ -1.85
LINC00888-204ENST00000487386 NECTIN1Q15223 517 aa3.48□□□□□ -1.85
LINC00888-204ENST00000487386 SLC1A5Q15758 541 aa3.48□□□□□ -1.85
LINC00888-204ENST00000487386 GPR33Q49SQ1 333 aa3.48□□□□□ -1.85
LINC00888-204ENST00000487386 GLIPR1L2Q4G1C9 344 aa3.48□□□□□ -1.85
LINC00888-204ENST00000487386 LCE3CQ5T5A8 94 aa3.48□□□□□ -1.85
LINC00888-204ENST00000487386 OR4A47Q6IF82 309 aa3.48□□□□□ -1.85
LINC00888-204ENST00000487386 KCTD6Q8NC69 237 aa3.48□□□□□ -1.85
LINC00888-204ENST00000487386 ZNF519Q8TB69 540 aa3.48□□□□□ -1.85
LINC00888-204ENST00000487386 MAPK15Q8TD08 544 aa3.48□□□□□ -1.85
LINC00888-204ENST00000487386 OTUB1Q96FW1 271 aaPredicted RBP3.48□□□□□ -1.85
LINC00888-204ENST00000487386 CFAP57Q96MR6 1250 aa3.48□□□□□ -1.85
LINC00888-204ENST00000487386 SPAG5Q96R06 1193 aa3.48□□□□□ -1.85
LINC00888-204ENST00000487386 LPAR4Q99677 370 aa3.48□□□□□ -1.85
LINC00888-204ENST00000487386 DGCR6LQ9BY27 220 aa3.48□□□□□ -1.85
LINC00888-204ENST00000487386 UBXN6Q9BZV1 441 aa3.48□□□□□ -1.85
LINC00888-204ENST00000487386 DNAJC4Q9NNZ3 241 aa3.48□□□□□ -1.85
LINC00888-204ENST00000487386 C19orf25Q9UFG5 118 aaPredicted RBP3.48□□□□□ -1.85
LINC00888-204ENST00000487386 R4GN57 208 aa3.48□□□□□ -1.85
LINC00888-204ENST00000487386 ARID2Q68CP9 1835 aa3.48□□□□□ -1.85
LINC00888-204ENST00000487386 PREX1Q8TCU6 1659 aa3.48□□□□□ -1.85
LINC00888-204ENST00000487386 ABCC3O15438 1527 aa3.48□□□□□ -1.85
LINC00888-204ENST00000487386 MYH15Q9Y2K3 1946 aa3.48□□□□□ -1.85
LINC00888-204ENST00000487386 MLH3Q9UHC1 1453 aa3.47□□□□□ -1.85
LINC00888-204ENST00000487386 SPAG9O60271 1321 aaKnown RBP3.47□□□□□ -1.85
LINC00888-204ENST00000487386 RTEL1-TNFRSF6BF6WH68 1400 aa3.47□□□□□ -1.85
LINC00888-204ENST00000487386 YEATS2Q9ULM3 1422 aa3.47□□□□□ -1.85
LINC00888-204ENST00000487386 SNURFLB1AK76 121 aa3.47□□□□□ -1.85
LINC00888-204ENST00000487386 UBE2CO00762 179 aa3.47□□□□□ -1.85
LINC00888-204ENST00000487386 SOCS3O14543 225 aa3.47□□□□□ -1.85
LINC00888-204ENST00000487386 ACHEP22303 614 aa3.47□□□□□ -1.85
LINC00888-204ENST00000487386 HLA-FP30511 346 aa3.47□□□□□ -1.85
LINC00888-204ENST00000487386 RAB28P51157 221 aa3.47□□□□□ -1.85
LINC00888-204ENST00000487386 CALCOCO2Q13137 446 aa3.47□□□□□ -1.85
LINC00888-204ENST00000487386 E2F5Q15329 346 aa3.47□□□□□ -1.85
LINC00888-204ENST00000487386 C2CD6Q53TS8 623 aa3.47□□□□□ -1.85
LINC00888-204ENST00000487386 TCTE1Q5JU00 501 aa3.47□□□□□ -1.85
LINC00888-204ENST00000487386 RASGEF1AQ8N9B8 481 aa3.47□□□□□ -1.85
LINC00888-204ENST00000487386 SLC37A3Q8NCC5 494 aa3.47□□□□□ -1.85
LINC00888-204ENST00000487386 OR7A2PQ8NGA2 310 aa3.47□□□□□ -1.85
LINC00888-204ENST00000487386 OR6S1Q8NH40 331 aa3.47□□□□□ -1.85
LINC00888-204ENST00000487386 ROBO4Q8WZ75 1007 aa3.47□□□□□ -1.85
LINC00888-204ENST00000487386 SECISBP2LQ93073 1101 aaKnown RBP3.47□□□□□ -1.85
LINC00888-204ENST00000487386 HDAC11Q96DB2 347 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms