RNA–Protein interactions for RNA: ENST00000487252.1

TRIM56-204, Transcript of tripartite motif containing 56, humanhuman

TSL 3

Gene TRIM56, Length 735 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-204ENST00000487252 TFGQ92734 400 aaPredicted RBP10.99□□□□□ -0.65
TRIM56-204ENST00000487252 PIGTQ969N2 578 aa10.99□□□□□ -0.65
TRIM56-204ENST00000487252 HES6Q96HZ4 224 aa10.99□□□□□ -0.65
TRIM56-204ENST00000487252 C19orf24Q9BVV8 132 aa10.99□□□□□ -0.65
TRIM56-204ENST00000487252 COG4Q9H9E3 785 aa10.99□□□□□ -0.65
TRIM56-204ENST00000487252 PNPLA3Q9NST1 481 aa10.99□□□□□ -0.65
TRIM56-204ENST00000487252 SMARCAL1Q9NZC9 954 aa10.99□□□□□ -0.65
TRIM56-204ENST00000487252 DMGDHQ9UI17 866 aaKnown RBP10.99□□□□□ -0.65
TRIM56-204ENST00000487252 KLHL20Q9Y2M5 609 aa10.99□□□□□ -0.65
TRIM56-204ENST00000487252 NOTCH1P46531 2555 aa10.99□□□□□ -0.65
TRIM56-204ENST00000487252 GLYATL1P3A0A0U1RQE8 302 aa10.98□□□□□ -0.65
TRIM56-204ENST00000487252 MBD3L4A6NDZ8 208 aaPredicted RBP10.98□□□□□ -0.65
TRIM56-204ENST00000487252 MBD3L5A6NJ08 208 aaPredicted RBP10.98□□□□□ -0.65
TRIM56-204ENST00000487252 IFRD1O00458 451 aaPredicted RBP10.98□□□□□ -0.65
TRIM56-204ENST00000487252 MFSD11O43934 449 aa10.98□□□□□ -0.65
TRIM56-204ENST00000487252 HS6ST1O60243 411 aa10.98□□□□□ -0.65
TRIM56-204ENST00000487252 SRPX2O60687 465 aaPredicted RBP10.98□□□□□ -0.65
TRIM56-204ENST00000487252 RNF8O76064 485 aa10.98□□□□□ -0.65
TRIM56-204ENST00000487252 GZMAP12544 262 aa10.98□□□□□ -0.65
TRIM56-204ENST00000487252 PDHA2P29803 388 aa10.98□□□□□ -0.65
TRIM56-204ENST00000487252 CAPRIN1Q14444 709 aaKnown RBP10.98□□□□□ -0.65
TRIM56-204ENST00000487252 EIF1ADQ8N9N8 165 aaKnown RBP10.98□□□□□ -0.65
TRIM56-204ENST00000487252 RNASE6Q93091 150 aaKnown RBP10.98□□□□□ -0.65
TRIM56-204ENST00000487252 IMP4Q96G21 291 aaKnown RBP10.98□□□□□ -0.65
TRIM56-204ENST00000487252 MS4A14Q96JA4 679 aa10.98□□□□□ -0.65
TRIM56-204ENST00000487252 SELENOSQ9BQE4 189 aa10.98□□□□□ -0.65
TRIM56-204ENST00000487252 B4GALT7Q9UBV7 327 aa10.98□□□□□ -0.65
TRIM56-204ENST00000487252 TMEM191CA6NGB0 347 aa10.97□□□□□ -0.65
TRIM56-204ENST00000487252 CDC40O60508 579 aaKnown RBP eCLIP10.97□□□□□ -0.65
TRIM56-204ENST00000487252 HEXBP07686 556 aa10.97□□□□□ -0.65
TRIM56-204ENST00000487252 FBLP22087 321 aaKnown RBP10.97□□□□□ -0.65
TRIM56-204ENST00000487252 AKT1P31749 480 aa10.97□□□□□ -0.65
TRIM56-204ENST00000487252 SLC26A3P40879 764 aa10.97□□□□□ -0.65
TRIM56-204ENST00000487252 GRIA3P42263 894 aa10.97□□□□□ -0.65
TRIM56-204ENST00000487252 OC90Q02509 493 aaPredicted RBP10.97□□□□□ -0.65
TRIM56-204ENST00000487252 AP1B1Q10567 949 aa10.97□□□□□ -0.65
TRIM56-204ENST00000487252 RPA4Q13156 261 aa10.97□□□□□ -0.65
TRIM56-204ENST00000487252 PPP2R5EQ16537 467 aa10.97□□□□□ -0.65
TRIM56-204ENST00000487252 BTBD16Q32M84 506 aa10.97□□□□□ -0.65
TRIM56-204ENST00000487252 WASHC2DQ5SRD0 308 aa10.97□□□□□ -0.65
TRIM56-204ENST00000487252 C11orf63Q6NUN7 778 aa10.97□□□□□ -0.65
TRIM56-204ENST00000487252 PEX26Q7Z412 305 aa10.97□□□□□ -0.65
TRIM56-204ENST00000487252 WDR53Q7Z5U6 358 aaPredicted RBP10.97□□□□□ -0.65
TRIM56-204ENST00000487252 SLC13A5Q86YT5 568 aaPredicted RBP10.97□□□□□ -0.65
TRIM56-204ENST00000487252 RHOT2Q8IXI1 618 aa10.97□□□□□ -0.65
TRIM56-204ENST00000487252 MCOLN2Q8IZK6 566 aa10.97□□□□□ -0.65
TRIM56-204ENST00000487252 AMER3Q8N944 861 aa10.97□□□□□ -0.65
TRIM56-204ENST00000487252 ZFP62Q8NB50 900 aaPredicted RBP10.97□□□□□ -0.65
TRIM56-204ENST00000487252 RELL2Q8NC24 303 aaPredicted RBP10.97□□□□□ -0.65
TRIM56-204ENST00000487252 OR52N2Q8NGI0 321 aa10.97□□□□□ -0.65
TRIM56-204ENST00000487252 OR5AR1Q8NGP9 310 aa10.97□□□□□ -0.65
TRIM56-204ENST00000487252 SLC35G2Q8TBE7 412 aa10.97□□□□□ -0.65
TRIM56-204ENST00000487252 CTNNBL1Q8WYA6 563 aaPredicted RBP10.97□□□□□ -0.65
TRIM56-204ENST00000487252 CAVIN3Q969G5 261 aa10.97□□□□□ -0.65
TRIM56-204ENST00000487252 C10orf90Q96M02 699 aa10.97□□□□□ -0.65
TRIM56-204ENST00000487252 PLA2G12AQ9BZM1 189 aa10.97□□□□□ -0.65
TRIM56-204ENST00000487252 TRIM7Q9C029 511 aa10.97□□□□□ -0.65
TRIM56-204ENST00000487252 ACBD3Q9H3P7 528 aa10.97□□□□□ -0.65
TRIM56-204ENST00000487252 MMP25Q9NPA2 562 aa10.97□□□□□ -0.65
TRIM56-204ENST00000487252 MED4Q9NPJ6 270 aa10.97□□□□□ -0.65
TRIM56-204ENST00000487252 PACSIN2Q9UNF0 486 aaPredicted RBP10.97□□□□□ -0.65
TRIM56-204ENST00000487252 ARHGAP21Q5T5U3 1957 aa10.97□□□□□ -0.65
TRIM56-204ENST00000487252 USF3Q68DE3 2245 aa10.96□□□□□ -0.65
TRIM56-204ENST00000487252 TUBAL3A6NHL2 446 aa10.96□□□□□ -0.65
TRIM56-204ENST00000487252 AGAP14A8MT82 685 aa10.96□□□□□ -0.65
TRIM56-204ENST00000487252 ISM1B1AKI9 464 aa10.96□□□□□ -0.65
TRIM56-204ENST00000487252 CCDC188H7C350 402 aa10.96□□□□□ -0.65
TRIM56-204ENST00000487252 CTSVO60911 334 aa10.96□□□□□ -0.65
TRIM56-204ENST00000487252 SEC24DO94855 1032 aaPredicted RBP10.96□□□□□ -0.65
TRIM56-204ENST00000487252 SOX30O94993 753 aa10.96□□□□□ -0.65
TRIM56-204ENST00000487252 C8orf89P0DMQ9 161 aa10.96□□□□□ -0.65
TRIM56-204ENST00000487252 PCK1P35558 622 aa10.96□□□□□ -0.65
TRIM56-204ENST00000487252 ASCL1P50553 236 aa10.96□□□□□ -0.65
TRIM56-204ENST00000487252 MESDQ14696 234 aa10.96□□□□□ -0.65
TRIM56-204ENST00000487252 PAFAH1B3Q15102 231 aaKnown RBP10.96□□□□□ -0.65
TRIM56-204ENST00000487252 SLC14A2Q15849 920 aa10.96□□□□□ -0.65
TRIM56-204ENST00000487252 BOLA3Q53S33 107 aa10.96□□□□□ -0.65
TRIM56-204ENST00000487252 C8orf74Q6P047 294 aa10.96□□□□□ -0.65
TRIM56-204ENST00000487252 EMBQ6PCB8 327 aa10.96□□□□□ -0.65
TRIM56-204ENST00000487252 PPP1R14CQ8TAE6 165 aa10.96□□□□□ -0.65
TRIM56-204ENST00000487252 FAM71BQ8TC56 605 aa10.96□□□□□ -0.65
TRIM56-204ENST00000487252 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.96□□□□□ -0.65
TRIM56-204ENST00000487252 SLCO2A1Q92959 643 aa10.96□□□□□ -0.65
TRIM56-204ENST00000487252 RNF25Q96BH1 459 aaPredicted RBP10.96□□□□□ -0.65
TRIM56-204ENST00000487252 TRABDQ9H4I3 376 aa10.96□□□□□ -0.65
TRIM56-204ENST00000487252 KCNK13Q9HB14 408 aa10.96□□□□□ -0.65
TRIM56-204ENST00000487252 PCDH18Q9HCL0 1135 aa10.96□□□□□ -0.65
TRIM56-204ENST00000487252 MKKSQ9NPJ1 570 aaPredicted RBP10.96□□□□□ -0.65
TRIM56-204ENST00000487252 TRPC4Q9UBN4 977 aa10.96□□□□□ -0.65
TRIM56-204ENST00000487252 FOXD3Q9UJU5 478 aaPredicted RBP10.96□□□□□ -0.65
TRIM56-204ENST00000487252 AMFRQ9UKV5 643 aa10.96□□□□□ -0.65
TRIM56-204ENST00000487252 IGHV3-20A0A0C4DH32 117 aa10.95□□□□□ -0.66
TRIM56-204ENST00000487252 OR14I1A6ND48 311 aa10.95□□□□□ -0.66
TRIM56-204ENST00000487252 FIGNL2A6NMB9 653 aa10.95□□□□□ -0.66
TRIM56-204ENST00000487252 NPIPA2E9PIF3 369 aa10.95□□□□□ -0.66
TRIM56-204ENST00000487252 NPIPA3F8WFD2 350 aa10.95□□□□□ -0.66
TRIM56-204ENST00000487252 PGRMC1O00264 195 aaKnown RBP10.95□□□□□ -0.66
TRIM56-204ENST00000487252 FFAR3O14843 346 aa10.95□□□□□ -0.66
TRIM56-204ENST00000487252 GPR42O15529 346 aa10.95□□□□□ -0.66
TRIM56-204ENST00000487252 TLX2O43763 284 aaPredicted RBP10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms