RNA–Protein interactions for RNA: ENST00000486837.1

LMBR1-218, Transcript of limb development membrane protein 1, humanhuman

TSL 2

Gene LMBR1, Length 576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-218ENST00000486837 ERVK-10P10266 1014 aa4.45□□□□□ -1.7
LMBR1-218ENST00000486837 EPCAMP16422 314 aa4.45□□□□□ -1.7
LMBR1-218ENST00000486837 CASTP20810 708 aaKnown RBP4.45□□□□□ -1.7
LMBR1-218ENST00000486837 TCEA1P23193 301 aaKnown RBP4.45□□□□□ -1.7
LMBR1-218ENST00000486837 ITGA3P26006 1051 aa4.45□□□□□ -1.7
LMBR1-218ENST00000486837 MNAT1P51948 309 aa4.45□□□□□ -1.7
LMBR1-218ENST00000486837 CAPZA1P52907 286 aa4.45□□□□□ -1.7
LMBR1-218ENST00000486837 LINC01547P58512 204 aaPredicted RBP4.45□□□□□ -1.7
LMBR1-218ENST00000486837 B3GALT5-AS1P59052 145 aa4.45□□□□□ -1.7
LMBR1-218ENST00000486837 LASP1Q14847 261 aaKnown RBP4.45□□□□□ -1.7
LMBR1-218ENST00000486837 MEP1BQ16820 701 aa4.45□□□□□ -1.7
LMBR1-218ENST00000486837 TYSND1Q2T9J0 566 aa4.45□□□□□ -1.7
LMBR1-218ENST00000486837 MCMDC2Q4G0Z9 681 aa4.45□□□□□ -1.7
LMBR1-218ENST00000486837 ZRANB3Q5FWF4 1079 aa4.45□□□□□ -1.7
LMBR1-218ENST00000486837 TCTE1Q5JU00 501 aa4.45□□□□□ -1.7
LMBR1-218ENST00000486837 MAPKAPK5-AS1Q8N8E1 139 aa4.45□□□□□ -1.7
LMBR1-218ENST00000486837 ZNF397Q8NF99 534 aaPredicted RBP4.45□□□□□ -1.7
LMBR1-218ENST00000486837 OLIG1Q8TAK6 271 aa4.45□□□□□ -1.7
LMBR1-218ENST00000486837 ERMNQ8TAM6 284 aa4.45□□□□□ -1.7
LMBR1-218ENST00000486837 FAM76AQ8TAV0 307 aa4.45□□□□□ -1.7
LMBR1-218ENST00000486837 GRAPLQ8TC17 118 aaPredicted RBP4.45□□□□□ -1.7
LMBR1-218ENST00000486837 DNASE2BQ8WZ79 361 aa4.45□□□□□ -1.7
LMBR1-218ENST00000486837 OTUB1Q96FW1 271 aaPredicted RBP4.45□□□□□ -1.7
LMBR1-218ENST00000486837 RBM18Q96H35 190 aaKnown RBP4.45□□□□□ -1.7
LMBR1-218ENST00000486837 FERMT1Q9BQL6 677 aa4.45□□□□□ -1.7
LMBR1-218ENST00000486837 THUMPD2Q9BTF0 503 aaKnown RBP4.45□□□□□ -1.7
LMBR1-218ENST00000486837 ZSCAN16Q9H4T2 348 aaPredicted RBP4.45□□□□□ -1.7
LMBR1-218ENST00000486837 LIN28AQ9H9Z2 209 aaKnown RBP4.45□□□□□ -1.7
LMBR1-218ENST00000486837 WDR37Q9Y2I8 494 aa4.45□□□□□ -1.7
LMBR1-218ENST00000486837 NOTCH4Q99466 2003 aa4.45□□□□□ -1.7
LMBR1-218ENST00000486837 DHX57Q6P158 1386 aaKnown RBP4.44□□□□□ -1.7
LMBR1-218ENST00000486837 A0A087WV48 116 aa4.44□□□□□ -1.7
LMBR1-218ENST00000486837 IGHV4-61A0A0C4DH41 118 aa4.44□□□□□ -1.7
LMBR1-218ENST00000486837 A0A1W2PRV1 198 aa4.44□□□□□ -1.7
LMBR1-218ENST00000486837 FAM25EA8MYX2 175 aa4.44□□□□□ -1.7
LMBR1-218ENST00000486837 BLOC1S5-TXNDC5H3BN57 136 aa4.44□□□□□ -1.7
LMBR1-218ENST00000486837 AP5Z1O43299 807 aa4.44□□□□□ -1.7
LMBR1-218ENST00000486837 MTRF1O75570 445 aaKnown RBP4.44□□□□□ -1.7
LMBR1-218ENST00000486837 RPS6KA5O75582 802 aa4.44□□□□□ -1.7
LMBR1-218ENST00000486837 ACSL3O95573 720 aa4.44□□□□□ -1.7
LMBR1-218ENST00000486837 PENKP01210 267 aaPredicted RBP4.44□□□□□ -1.7
LMBR1-218ENST00000486837 IGHV4-59P01825 116 aa4.44□□□□□ -1.7
LMBR1-218ENST00000486837 EDN1P05305 212 aa4.44□□□□□ -1.7
LMBR1-218ENST00000486837 IVLP07476 585 aa4.44□□□□□ -1.7
LMBR1-218ENST00000486837 SP1P08047 785 aa4.44□□□□□ -1.7
LMBR1-218ENST00000486837 FRMD6-AS1P0C7T7 363 aa4.44□□□□□ -1.7
LMBR1-218ENST00000486837 PLA2G4BP0C869 781 aa4.44□□□□□ -1.7
LMBR1-218ENST00000486837 IRF2P14316 349 aa4.44□□□□□ -1.7
LMBR1-218ENST00000486837 JAK1P23458 1154 aa4.44□□□□□ -1.7
LMBR1-218ENST00000486837 NF2P35240 595 aa4.44□□□□□ -1.7
LMBR1-218ENST00000486837 MAZP56270 477 aaKnown RBP4.44□□□□□ -1.7
LMBR1-218ENST00000486837 HERV-K104P61576 105 aa4.44□□□□□ -1.7
LMBR1-218ENST00000486837 TUBB4BP68371 445 aa4.44□□□□□ -1.7
LMBR1-218ENST00000486837 MECOMQ03112 1051 aa4.44□□□□□ -1.7
LMBR1-218ENST00000486837 KLC1Q07866 573 aa4.44□□□□□ -1.7
LMBR1-218ENST00000486837 NCBP1Q09161 790 aaKnown RBP4.44□□□□□ -1.7
LMBR1-218ENST00000486837 ZNF415Q09FC8 603 aa4.44□□□□□ -1.7
LMBR1-218ENST00000486837 KLHL30Q0D2K2 578 aa4.44□□□□□ -1.7
LMBR1-218ENST00000486837 GPR17Q13304 367 aa4.44□□□□□ -1.7
LMBR1-218ENST00000486837 KIAA1644Q3SXP7 199 aa4.44□□□□□ -1.7
LMBR1-218ENST00000486837 PHLDA2Q53GA4 152 aa4.44□□□□□ -1.7
LMBR1-218ENST00000486837 TOR1AIP1Q5JTV8 583 aa4.44□□□□□ -1.7
LMBR1-218ENST00000486837 SPDYCQ5MJ68 293 aa4.44□□□□□ -1.7
LMBR1-218ENST00000486837 C6orf136Q5SQH8 315 aa4.44□□□□□ -1.7
LMBR1-218ENST00000486837 PPP1R21Q6ZMI0 780 aa4.44□□□□□ -1.7
LMBR1-218ENST00000486837 TMEM110Q86TL2 294 aa4.44□□□□□ -1.7
LMBR1-218ENST00000486837 PEX5LQ8IYB4 626 aa4.44□□□□□ -1.7
LMBR1-218ENST00000486837 SYCP3Q8IZU3 236 aa4.44□□□□□ -1.7
LMBR1-218ENST00000486837 RYBPQ8N488 228 aaPredicted RBP4.44□□□□□ -1.7
LMBR1-218ENST00000486837 BMPERQ8N8U9 685 aa4.44□□□□□ -1.7
LMBR1-218ENST00000486837 OR11H4Q8NGC9 324 aa4.44□□□□□ -1.7
LMBR1-218ENST00000486837 OR52N5Q8NH56 324 aa4.44□□□□□ -1.7
LMBR1-218ENST00000486837 FAM81AQ8TBF8 368 aa4.44□□□□□ -1.7
LMBR1-218ENST00000486837 TMEM143Q96AN5 459 aa4.44□□□□□ -1.7
LMBR1-218ENST00000486837 SENP5Q96HI0 755 aaPredicted RBP4.44□□□□□ -1.7
LMBR1-218ENST00000486837 MGME1Q9BQP7 344 aa4.44□□□□□ -1.7
LMBR1-218ENST00000486837 SLC39A3Q9BRY0 314 aa4.44□□□□□ -1.7
LMBR1-218ENST00000486837 FZD8Q9H461 694 aa4.44□□□□□ -1.7
LMBR1-218ENST00000486837 DCAF16Q9NXF7 216 aa4.44□□□□□ -1.7
LMBR1-218ENST00000486837 C6orf203Q9P0P8 240 aaPredicted RBP4.44□□□□□ -1.7
LMBR1-218ENST00000486837 NUDCQ9Y266 331 aa4.44□□□□□ -1.7
LMBR1-218ENST00000486837 EVC2Q86UK5 1308 aa4.44□□□□□ -1.7
LMBR1-218ENST00000486837 KIAA1210Q9ULL0 1709 aa4.43□□□□□ -1.7
LMBR1-218ENST00000486837 A0A087WUV0 522 aaPredicted RBP4.43□□□□□ -1.7
LMBR1-218ENST00000486837 C2orf81A6NN90 581 aa4.43□□□□□ -1.7
LMBR1-218ENST00000486837 PGRMC2O15173 223 aa4.43□□□□□ -1.7
LMBR1-218ENST00000486837 CEACAM8P31997 349 aaPredicted RBP4.43□□□□□ -1.7
LMBR1-218ENST00000486837 NT5C2P49902 561 aa4.43□□□□□ -1.7
LMBR1-218ENST00000486837 TPM4P67936 248 aa4.43□□□□□ -1.7
LMBR1-218ENST00000486837 VEZF1Q14119 521 aa4.43□□□□□ -1.7
LMBR1-218ENST00000486837 TRIM29Q14134 588 aa4.43□□□□□ -1.7
LMBR1-218ENST00000486837 NPTX1Q15818 432 aa4.43□□□□□ -1.7
LMBR1-218ENST00000486837 WSCD2Q2TBF2 565 aa4.43□□□□□ -1.7
LMBR1-218ENST00000486837 ANKRD20A4Q4UJ75 823 aa4.43□□□□□ -1.7
LMBR1-218ENST00000486837 PDLIM3Q53GG5 364 aaPredicted RBP4.43□□□□□ -1.7
LMBR1-218ENST00000486837 ANKRD20A8PQ5CZ79 823 aa4.43□□□□□ -1.7
LMBR1-218ENST00000486837 ANKRD20A2Q5SQ80 823 aa4.43□□□□□ -1.7
LMBR1-218ENST00000486837 ANKRD20A1Q5TYW2 823 aa4.43□□□□□ -1.7
LMBR1-218ENST00000486837 ANKRD20A3Q5VUR7 823 aa4.43□□□□□ -1.7
LMBR1-218ENST00000486837 LRRC31Q6UY01 552 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms