RNA–Protein interactions for RNA: ENST00000486741.5

HMGN1-216, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 4,299 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-216ENST00000486741 MACC1Q6ZN28 852 aa12.81□□□□□ -0.36
HMGN1-216ENST00000486741 VRK3Q8IV63 474 aa12.81□□□□□ -0.36
HMGN1-216ENST00000486741 OR2A12Q8NGT7 310 aa12.81□□□□□ -0.36
HMGN1-216ENST00000486741 HUS1BQ8NHY5 278 aa12.81□□□□□ -0.36
HMGN1-216ENST00000486741 SLC5A11Q8WWX8 675 aa12.81□□□□□ -0.36
HMGN1-216ENST00000486741 ITFG2Q969R8 447 aa12.81□□□□□ -0.36
HMGN1-216ENST00000486741 LMLNQ96KR4 655 aa12.81□□□□□ -0.36
HMGN1-216ENST00000486741 TRIB3Q96RU7 358 aa12.81□□□□□ -0.36
HMGN1-216ENST00000486741 NODALQ96S42 347 aa12.81□□□□□ -0.36
HMGN1-216ENST00000486741 RPF2Q9H7B2 306 aaKnown RBP12.81□□□□□ -0.36
HMGN1-216ENST00000486741 ZCCHC3Q9NUD5 404 aaKnown RBP12.81□□□□□ -0.36
HMGN1-216ENST00000486741 GUCY1B2O75343 617 aa12.8□□□□□ -0.36
HMGN1-216ENST00000486741 LAMP1P11279 417 aa12.8□□□□□ -0.36
HMGN1-216ENST00000486741 ITGA2P17301 1181 aa12.8□□□□□ -0.36
HMGN1-216ENST00000486741 CDC42P60953 191 aa12.8□□□□□ -0.36
HMGN1-216ENST00000486741 MADCAM1Q13477 382 aa12.8□□□□□ -0.36
HMGN1-216ENST00000486741 SELPLGQ14242 412 aa12.8□□□□□ -0.36
HMGN1-216ENST00000486741 LRRC32Q14392 662 aa12.8□□□□□ -0.36
HMGN1-216ENST00000486741 HEPACAMQ14CZ8 416 aa12.8□□□□□ -0.36
HMGN1-216ENST00000486741 FBXO46Q6PJ61 603 aaPredicted RBP12.8□□□□□ -0.36
HMGN1-216ENST00000486741 FNDC11Q9BVV2 318 aa12.8□□□□□ -0.36
HMGN1-216ENST00000486741 TMEM245Q9H330 911 aa12.8□□□□□ -0.36
HMGN1-216ENST00000486741 C5AR2Q9P296 337 aa12.8□□□□□ -0.36
HMGN1-216ENST00000486741 MAP10Q9P2G4 905 aa12.8□□□□□ -0.36
HMGN1-216ENST00000486741 PCDHB14Q9Y5E9 798 aa12.8□□□□□ -0.36
HMGN1-216ENST00000486741 CR2P20023 1033 aa12.8□□□□□ -0.36
HMGN1-216ENST00000486741 MAGP20916 626 aa12.8□□□□□ -0.36
HMGN1-216ENST00000486741 TACR1P25103 407 aa12.8□□□□□ -0.36
HMGN1-216ENST00000486741 NUDT6P53370 316 aa12.8□□□□□ -0.36
HMGN1-216ENST00000486741 PTSQ03393 145 aa12.8□□□□□ -0.36
HMGN1-216ENST00000486741 ABHD18Q0P651 414 aa12.8□□□□□ -0.36
HMGN1-216ENST00000486741 ELAVL3Q14576 367 aaKnown RBP12.8□□□□□ -0.36
HMGN1-216ENST00000486741 SBSNQ6UWP8 590 aa12.8□□□□□ -0.36
HMGN1-216ENST00000486741 VTCN1Q7Z7D3 282 aa12.8□□□□□ -0.36
HMGN1-216ENST00000486741 OR4E2Q8NGC2 313 aa12.8□□□□□ -0.36
HMGN1-216ENST00000486741 HMGB4Q8WW32 186 aa12.8□□□□□ -0.36
HMGN1-216ENST00000486741 HSH2DQ96JZ2 352 aa12.8□□□□□ -0.36
HMGN1-216ENST00000486741 KCNC2Q96PR1 638 aa12.8□□□□□ -0.36
HMGN1-216ENST00000486741 ATG2BQ96BY7 2078 aa12.8□□□□□ -0.36
HMGN1-216ENST00000486741 FEZF1A0PJY2 475 aa12.8□□□□□ -0.36
HMGN1-216ENST00000486741 ERI3O43414 337 aaKnown RBP12.8□□□□□ -0.36
HMGN1-216ENST00000486741 KAT7O95251 611 aa12.8□□□□□ -0.36
HMGN1-216ENST00000486741 DLGAP3O95886 979 aa12.8□□□□□ -0.36
HMGN1-216ENST00000486741 GNAO1P09471 354 aa12.8□□□□□ -0.36
HMGN1-216ENST00000486741 LHCGRP22888 699 aa12.8□□□□□ -0.36
HMGN1-216ENST00000486741 TTKP33981 857 aa12.8□□□□□ -0.36
HMGN1-216ENST00000486741 CCR4P51679 360 aa12.8□□□□□ -0.36
HMGN1-216ENST00000486741 RCAN2Q14206 197 aa12.8□□□□□ -0.36
HMGN1-216ENST00000486741 DPY19L1Q2PZI1 675 aa12.8□□□□□ -0.36
HMGN1-216ENST00000486741 PTCHD4Q6ZW05 846 aa12.8□□□□□ -0.36
HMGN1-216ENST00000486741 UTS2BQ765I0 119 aa12.8□□□□□ -0.36
HMGN1-216ENST00000486741 NFKBIDQ8NI38 313 aa12.8□□□□□ -0.36
HMGN1-216ENST00000486741 DOK4Q8TEW6 326 aa12.8□□□□□ -0.36
HMGN1-216ENST00000486741 SIPA1Q96FS4 1042 aa12.8□□□□□ -0.36
HMGN1-216ENST00000486741 SLC12A9Q9BXP2 914 aa12.8□□□□□ -0.36
HMGN1-216ENST00000486741 ACPTQ9BZG2 426 aa12.8□□□□□ -0.36
HMGN1-216ENST00000486741 ARID1BQ8NFD5 2236 aaPredicted RBP12.8□□□□□ -0.36
HMGN1-216ENST00000486741 ARHGEF33A8MVX0 844 aa12.79□□□□□ -0.36
HMGN1-216ENST00000486741 FOXD2O60548 495 aaPredicted RBP12.79□□□□□ -0.36
HMGN1-216ENST00000486741 SERPINB7O75635 380 aa12.79□□□□□ -0.36
HMGN1-216ENST00000486741 MATN4O95460 622 aa12.79□□□□□ -0.36
HMGN1-216ENST00000486741 IFNW1P05000 195 aa12.79□□□□□ -0.36
HMGN1-216ENST00000486741 HPGDP15428 266 aa12.79□□□□□ -0.36
HMGN1-216ENST00000486741 TIMP2P16035 220 aa12.79□□□□□ -0.36
HMGN1-216ENST00000486741 PTNP21246 168 aa12.79□□□□□ -0.36
HMGN1-216ENST00000486741 RPS26P62854 115 aaKnown RBP12.79□□□□□ -0.36
HMGN1-216ENST00000486741 OR2T5Q6IEZ7 315 aa12.79□□□□□ -0.36
HMGN1-216ENST00000486741 PARS2Q7L3T8 475 aaKnown RBP12.79□□□□□ -0.36
HMGN1-216ENST00000486741 ZNF784Q8NCA9 323 aaPredicted RBP12.79□□□□□ -0.36
HMGN1-216ENST00000486741 OR2T29Q8NH02 315 aa12.79□□□□□ -0.36
HMGN1-216ENST00000486741 OR5K1Q8NHB7 308 aa12.79□□□□□ -0.36
HMGN1-216ENST00000486741 ZFP28Q8NHY6 868 aa12.79□□□□□ -0.36
HMGN1-216ENST00000486741 RELTQ969Z4 430 aa12.79□□□□□ -0.36
HMGN1-216ENST00000486741 PYURFQ96I23 114 aa12.79□□□□□ -0.36
HMGN1-216ENST00000486741 SEMA3GQ9NS98 782 aa12.79□□□□□ -0.36
HMGN1-216ENST00000486741 ZNF780BQ9Y6R6 833 aa12.79□□□□□ -0.36
HMGN1-216ENST00000486741 FAM92AA1XBS5 289 aa12.79□□□□□ -0.36
HMGN1-216ENST00000486741 TARM1B6A8C7 271 aa12.79□□□□□ -0.36
HMGN1-216ENST00000486741 APOA1P02647 267 aa12.79□□□□□ -0.36
HMGN1-216ENST00000486741 C1SP09871 688 aa12.79□□□□□ -0.36
HMGN1-216ENST00000486741 NOS3P29474 1203 aa12.79□□□□□ -0.36
HMGN1-216ENST00000486741 SCARB2Q14108 478 aa12.79□□□□□ -0.36
HMGN1-216ENST00000486741 DUS1LQ6P1R4 473 aaKnown RBP12.79□□□□□ -0.36
HMGN1-216ENST00000486741 NPAS3Q8IXF0 933 aa12.79□□□□□ -0.36
HMGN1-216ENST00000486741 SMARCD2Q92925 531 aa12.79□□□□□ -0.36
HMGN1-216ENST00000486741 OTUB2Q96DC9 234 aa12.79□□□□□ -0.36
HMGN1-216ENST00000486741 KIF13BQ9NQT8 1826 aa12.79□□□□□ -0.36
HMGN1-216ENST00000486741 MID1O15344 667 aa12.79□□□□□ -0.36
HMGN1-216ENST00000486741 XPNPEP2O43895 674 aa12.79□□□□□ -0.36
HMGN1-216ENST00000486741 PENKP01210 267 aaPredicted RBP12.79□□□□□ -0.36
HMGN1-216ENST00000486741 VIPP01282 170 aa12.79□□□□□ -0.36
HMGN1-216ENST00000486741 TNFRSF1BP20333 461 aa12.79□□□□□ -0.36
HMGN1-216ENST00000486741 FUT4P22083 530 aa12.79□□□□□ -0.36
HMGN1-216ENST00000486741 TLX1P31314 330 aaPredicted RBP12.79□□□□□ -0.36
HMGN1-216ENST00000486741 KCNAB2Q13303 367 aa12.79□□□□□ -0.36
HMGN1-216ENST00000486741 MPP7Q5T2T1 576 aa12.79□□□□□ -0.36
HMGN1-216ENST00000486741 RNF130Q86XS8 419 aa12.79□□□□□ -0.36
HMGN1-216ENST00000486741 CPXM2Q8N436 756 aa12.79□□□□□ -0.36
HMGN1-216ENST00000486741 GIPC3Q8TF64 312 aa12.79□□□□□ -0.36
HMGN1-216ENST00000486741 TSPEARQ8WU66 669 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms