RNA–Protein interactions for RNA: ENST00000485618.1

SF3A1-208, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-208ENST00000485618 AHRP35869 848 aa7.93□□□□□ -1.14
SF3A1-208ENST00000485618 ARL1P40616 181 aaPredicted RBP7.93□□□□□ -1.14
SF3A1-208ENST00000485618 HSPA7P48741 367 aa7.93□□□□□ -1.14
SF3A1-208ENST00000485618 CSRP3P50461 194 aa7.93□□□□□ -1.14
SF3A1-208ENST00000485618 PGGT1BP53609 377 aa7.93□□□□□ -1.14
SF3A1-208ENST00000485618 PRKAA2P54646 552 aa7.93□□□□□ -1.14
SF3A1-208ENST00000485618 PHEXP78562 749 aa7.93□□□□□ -1.14
SF3A1-208ENST00000485618 IRF9Q00978 393 aa7.93□□□□□ -1.14
SF3A1-208ENST00000485618 IRF8Q02556 426 aa7.93□□□□□ -1.14
SF3A1-208ENST00000485618 TGM3Q08188 693 aa7.93□□□□□ -1.14
SF3A1-208ENST00000485618 ZNF844Q08AG5 666 aa7.93□□□□□ -1.14
SF3A1-208ENST00000485618 DLG1Q12959 904 aa7.93□□□□□ -1.14
SF3A1-208ENST00000485618 MAP7Q14244 749 aa7.93□□□□□ -1.14
SF3A1-208ENST00000485618 CASP8Q14790 479 aa7.93□□□□□ -1.14
SF3A1-208ENST00000485618 SETDB1Q15047 1291 aa7.93□□□□□ -1.14
SF3A1-208ENST00000485618 TBCCQ15814 346 aa7.93□□□□□ -1.14
SF3A1-208ENST00000485618 TECRLQ5HYJ1 363 aa7.93□□□□□ -1.14
SF3A1-208ENST00000485618 C10orf62Q5T681 223 aaPredicted RBP7.93□□□□□ -1.14
SF3A1-208ENST00000485618 GARNL3Q5VVW2 1013 aa7.93□□□□□ -1.14
SF3A1-208ENST00000485618 BROXQ5VW32 411 aa7.93□□□□□ -1.14
SF3A1-208ENST00000485618 ATG9BQ674R7 924 aa7.93□□□□□ -1.14
SF3A1-208ENST00000485618 NXPE4Q6UWF7 544 aa7.93□□□□□ -1.14
SF3A1-208ENST00000485618 C6orf15Q6UXA7 325 aaPredicted RBP7.93□□□□□ -1.14
SF3A1-208ENST00000485618 MBOAT1Q6ZNC8 495 aa7.93□□□□□ -1.14
SF3A1-208ENST00000485618 GPR155Q7Z3F1 870 aa7.93□□□□□ -1.14
SF3A1-208ENST00000485618 TRIM73Q86UV7 250 aa7.93□□□□□ -1.14
SF3A1-208ENST00000485618 TRABD2AQ86V40 505 aa7.93□□□□□ -1.14
SF3A1-208ENST00000485618 PAQR7Q86WK9 346 aa7.93□□□□□ -1.14
SF3A1-208ENST00000485618 SRRM1Q8IYB3 904 aaKnown RBP7.93□□□□□ -1.14
SF3A1-208ENST00000485618 LRRC56Q8IYG6 542 aaPredicted RBP7.93□□□□□ -1.14
SF3A1-208ENST00000485618 BMPERQ8N8U9 685 aa7.93□□□□□ -1.14
SF3A1-208ENST00000485618 ZNF248Q8NDW4 579 aa7.93□□□□□ -1.14
SF3A1-208ENST00000485618 TRPV3Q8NET8 790 aa7.93□□□□□ -1.14
SF3A1-208ENST00000485618 OR2W6PQ8NHA6 318 aa7.93□□□□□ -1.14
SF3A1-208ENST00000485618 FLVCR1-AS1Q8TAF5 88 aa7.93□□□□□ -1.14
SF3A1-208ENST00000485618 PROKR1Q8TCW9 393 aa7.93□□□□□ -1.14
SF3A1-208ENST00000485618 UBTD2Q8WUN7 234 aa7.93□□□□□ -1.14
SF3A1-208ENST00000485618 PYCR2Q96C36 320 aa7.93□□□□□ -1.14
SF3A1-208ENST00000485618 CLIP3Q96DZ5 547 aa7.93□□□□□ -1.14
SF3A1-208ENST00000485618 PTCD3Q96EY7 689 aaKnown RBP7.93□□□□□ -1.14
SF3A1-208ENST00000485618 PRR11Q96HE9 360 aaPredicted RBP7.93□□□□□ -1.14
SF3A1-208ENST00000485618 GPR78Q96P69 363 aa7.93□□□□□ -1.14
SF3A1-208ENST00000485618 CENPKQ9BS16 269 aa7.93□□□□□ -1.14
SF3A1-208ENST00000485618 EFCAB11Q9BUY7 163 aa7.93□□□□□ -1.14
SF3A1-208ENST00000485618 UNKQ9C0B0 810 aaKnown RBP7.93□□□□□ -1.14
SF3A1-208ENST00000485618 KLHL25Q9H0H3 589 aa7.93□□□□□ -1.14
SF3A1-208ENST00000485618 VIPAS39Q9H9C1 493 aa7.93□□□□□ -1.14
SF3A1-208ENST00000485618 SSU72Q9NP77 194 aaKnown RBP7.93□□□□□ -1.14
SF3A1-208ENST00000485618 SIDT1Q9NXL6 827 aaKnown RBP7.93□□□□□ -1.14
SF3A1-208ENST00000485618 XPR1Q9UBH6 696 aa7.93□□□□□ -1.14
SF3A1-208ENST00000485618 ACSL6Q9UKU0 697 aa7.93□□□□□ -1.14
SF3A1-208ENST00000485618 PCDHB3Q9Y5E6 796 aa7.93□□□□□ -1.14
SF3A1-208ENST00000485618 ACTL7BQ9Y614 415 aa7.93□□□□□ -1.14
SF3A1-208ENST00000485618 URB1O60287 2271 aaKnown RBP7.92□□□□□ -1.14
SF3A1-208ENST00000485618 A0A088AWK7 358 aa7.92□□□□□ -1.14
SF3A1-208ENST00000485618 TEX51A0A1B0GUA7 166 aa7.92□□□□□ -1.14
SF3A1-208ENST00000485618 A0A1W2PPM1 405 aa7.92□□□□□ -1.14
SF3A1-208ENST00000485618 OR2A25A4D2G3 310 aa7.92□□□□□ -1.14
SF3A1-208ENST00000485618 ANKDD1BA6NHY2 528 aa7.92□□□□□ -1.14
SF3A1-208ENST00000485618 CDRT15L2A8MXV6 281 aa7.92□□□□□ -1.14
SF3A1-208ENST00000485618 AGRPO00253 132 aa7.92□□□□□ -1.14
SF3A1-208ENST00000485618 OR1F1O43749 312 aa7.92□□□□□ -1.14
SF3A1-208ENST00000485618 KLK8O60259 260 aa7.92□□□□□ -1.14
SF3A1-208ENST00000485618 STK17BO94768 372 aa7.92□□□□□ -1.14
SF3A1-208ENST00000485618 OTCP00480 354 aa7.92□□□□□ -1.14
SF3A1-208ENST00000485618 EIF2S1P05198 315 aaKnown RBP7.92□□□□□ -1.14
SF3A1-208ENST00000485618 LIPCP11150 499 aa7.92□□□□□ -1.14
SF3A1-208ENST00000485618 CDH1P12830 882 aa7.92□□□□□ -1.14
SF3A1-208ENST00000485618 PLA2G2AP14555 144 aa7.92□□□□□ -1.14
SF3A1-208ENST00000485618 CPA3P15088 417 aa7.92□□□□□ -1.14
SF3A1-208ENST00000485618 ITIH1P19827 911 aa7.92□□□□□ -1.14
SF3A1-208ENST00000485618 ITGAXP20702 1163 aa7.92□□□□□ -1.14
SF3A1-208ENST00000485618 IMPDH1P20839 514 aa7.92□□□□□ -1.14
SF3A1-208ENST00000485618 ZNF10P21506 573 aaPredicted RBP7.92□□□□□ -1.14
SF3A1-208ENST00000485618 PSMB5P28074 263 aa7.92□□□□□ -1.14
SF3A1-208ENST00000485618 PEBP1P30086 187 aaKnown RBP7.92□□□□□ -1.14
SF3A1-208ENST00000485618 HNF4AP41235 474 aa7.92□□□□□ -1.14
SF3A1-208ENST00000485618 CASP2P42575 452 aa7.92□□□□□ -1.14
SF3A1-208ENST00000485618 SLC6A12P48065 614 aa7.92□□□□□ -1.14
SF3A1-208ENST00000485618 KCNC1P48547 511 aa7.92□□□□□ -1.14
SF3A1-208ENST00000485618 UCNP55089 124 aa7.92□□□□□ -1.14
SF3A1-208ENST00000485618 VSX2P58304 361 aaPredicted RBP7.92□□□□□ -1.14
SF3A1-208ENST00000485618 STXBP1P61764 594 aaKnown RBP7.92□□□□□ -1.14
SF3A1-208ENST00000485618 HERVK_113P63132 956 aa7.92□□□□□ -1.14
SF3A1-208ENST00000485618 CXADRP78310 365 aa7.92□□□□□ -1.14
SF3A1-208ENST00000485618 SH3BP2P78314 561 aa7.92□□□□□ -1.14
SF3A1-208ENST00000485618 NFKB2Q00653 900 aa7.92□□□□□ -1.14
SF3A1-208ENST00000485618 SLC18A2Q05940 514 aa7.92□□□□□ -1.14
SF3A1-208ENST00000485618 RGS1Q08116 209 aa7.92□□□□□ -1.14
SF3A1-208ENST00000485618 ABHD18Q0P651 414 aa7.92□□□□□ -1.14
SF3A1-208ENST00000485618 GPS2Q13227 327 aa7.92□□□□□ -1.14
SF3A1-208ENST00000485618 PWP1Q13610 501 aa7.92□□□□□ -1.14
SF3A1-208ENST00000485618 GTF2H2Q13888 395 aa7.92□□□□□ -1.14
SF3A1-208ENST00000485618 KCNAB1Q14722 419 aa7.92□□□□□ -1.14
SF3A1-208ENST00000485618 PCBP2Q15366 365 aaKnown RBP eCLIP7.92□□□□□ -1.14
SF3A1-208ENST00000485618 GPR19Q15760 415 aa7.92□□□□□ -1.14
SF3A1-208ENST00000485618 MUM1Q2TAK8 710 aa7.92□□□□□ -1.14
SF3A1-208ENST00000485618 XKR6Q5GH73 641 aa7.92□□□□□ -1.14
SF3A1-208ENST00000485618 WASHC2DQ5SRD0 308 aa7.92□□□□□ -1.14
SF3A1-208ENST00000485618 LIPJQ5W064 366 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms