RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 CD63P08962 238 aa11.69□□□□□ -0.54
MSH5-216ENST00000484309 PGDP52209 483 aa11.69□□□□□ -0.54
MSH5-216ENST00000484309 RRADP55042 308 aa11.69□□□□□ -0.54
MSH5-216ENST00000484309 AP1S2P56377 157 aa11.69□□□□□ -0.54
MSH5-216ENST00000484309 GUCY2DQ02846 1103 aa11.69□□□□□ -0.54
MSH5-216ENST00000484309 TLE1Q04724 770 aa11.69□□□□□ -0.54
MSH5-216ENST00000484309 TSNQ15631 228 aaKnown RBP11.69□□□□□ -0.54
MSH5-216ENST00000484309 PPP1R3AQ16821 1122 aa11.69□□□□□ -0.54
MSH5-216ENST00000484309 SYT16Q17RD7 645 aa11.69□□□□□ -0.54
MSH5-216ENST00000484309 WHAMMP3Q1A5X7 153 aa11.69□□□□□ -0.54
MSH5-216ENST00000484309 C18orf21Q32NC0 220 aaPredicted RBP11.69□□□□□ -0.54
MSH5-216ENST00000484309 KBTBD12Q3ZCT8 623 aa11.69□□□□□ -0.54
MSH5-216ENST00000484309 VWA2Q5GFL6 755 aa11.69□□□□□ -0.54
MSH5-216ENST00000484309 UBAP2Q5T6F2 1119 aaKnown RBP11.69□□□□□ -0.54
MSH5-216ENST00000484309 MED25Q71SY5 747 aa11.69□□□□□ -0.54
MSH5-216ENST00000484309 VN1R4Q7Z5H5 301 aa11.69□□□□□ -0.54
MSH5-216ENST00000484309 NKAPQ8N5F7 415 aaKnown RBP11.69□□□□□ -0.54
MSH5-216ENST00000484309 PPM1NQ8N819 430 aa11.69□□□□□ -0.54
MSH5-216ENST00000484309 TMEM102Q8N9M5 508 aaPredicted RBP11.69□□□□□ -0.54
MSH5-216ENST00000484309 NOA1Q8NC60 698 aaKnown RBP11.69□□□□□ -0.54
MSH5-216ENST00000484309 FDCSPQ8NFU4 85 aa11.69□□□□□ -0.54
MSH5-216ENST00000484309 OR56A3Q8NH54 315 aa11.69□□□□□ -0.54
MSH5-216ENST00000484309 ZCCHC10Q8TBK6 192 aa11.69□□□□□ -0.54
MSH5-216ENST00000484309 FBF1Q8TES7 1133 aa11.69□□□□□ -0.54
MSH5-216ENST00000484309 FBXL8Q96CD0 374 aa11.69□□□□□ -0.54
MSH5-216ENST00000484309 MRRFQ96E11 262 aaKnown RBP11.69□□□□□ -0.54
MSH5-216ENST00000484309 MMABQ96EY8 250 aaPredicted RBP11.69□□□□□ -0.54
MSH5-216ENST00000484309 TSNARE1Q96NA8 513 aa11.69□□□□□ -0.54
MSH5-216ENST00000484309 OR4K3Q96R72 315 aa11.69□□□□□ -0.54
MSH5-216ENST00000484309 RBBP8Q99708 897 aa11.69□□□□□ -0.54
MSH5-216ENST00000484309 EGFL8Q99944 293 aa11.69□□□□□ -0.54
MSH5-216ENST00000484309 NUDT9Q9BW91 350 aa11.69□□□□□ -0.54
MSH5-216ENST00000484309 PCBD2Q9H0N5 130 aa11.69□□□□□ -0.54
MSH5-216ENST00000484309 LRRC4CQ9HCJ2 640 aa11.69□□□□□ -0.54
MSH5-216ENST00000484309 ENAMQ9NRM1 1142 aa11.69□□□□□ -0.54
MSH5-216ENST00000484309 CTNNAL1Q9UBT7 734 aa11.69□□□□□ -0.54
MSH5-216ENST00000484309 MYO18BQ8IUG5 2567 aa11.68□□□□□ -0.54
MSH5-216ENST00000484309 NCF1BA6NI72 391 aaPredicted RBP11.68□□□□□ -0.54
MSH5-216ENST00000484309 NCF1CA8MVU1 366 aaPredicted RBP11.68□□□□□ -0.54
MSH5-216ENST00000484309 FOXS1O43638 330 aa11.68□□□□□ -0.54
MSH5-216ENST00000484309 LCMT2O60294 686 aaKnown RBP11.68□□□□□ -0.54
MSH5-216ENST00000484309 ONECUT2O95948 504 aa11.68□□□□□ -0.54
MSH5-216ENST00000484309 ALBP02768 609 aa11.68□□□□□ -0.54
MSH5-216ENST00000484309 ENO2P09104 434 aaPredicted RBP11.68□□□□□ -0.54
MSH5-216ENST00000484309 NCF1P14598 390 aaPredicted RBP11.68□□□□□ -0.54
MSH5-216ENST00000484309 NPPBP16860 134 aa11.68□□□□□ -0.54
MSH5-216ENST00000484309 CCND1P24385 295 aa11.68□□□□□ -0.54
MSH5-216ENST00000484309 GP5P40197 560 aa11.68□□□□□ -0.54
MSH5-216ENST00000484309 BCL6P41182 706 aa11.68□□□□□ -0.54
MSH5-216ENST00000484309 RPS15AP62244 130 aaKnown RBP11.68□□□□□ -0.54
MSH5-216ENST00000484309 MAT1AQ00266 395 aaKnown RBP11.68□□□□□ -0.54
MSH5-216ENST00000484309 POU4F1Q01851 419 aa11.68□□□□□ -0.54
MSH5-216ENST00000484309 OCA2Q04671 838 aa11.68□□□□□ -0.54
MSH5-216ENST00000484309 KLC1Q07866 573 aa11.68□□□□□ -0.54
MSH5-216ENST00000484309 KLRB1Q12918 225 aa11.68□□□□□ -0.54
MSH5-216ENST00000484309 USP10Q14694 798 aaKnown RBP11.68□□□□□ -0.54
MSH5-216ENST00000484309 SLMAPQ14BN4 828 aa11.68□□□□□ -0.54
MSH5-216ENST00000484309 RBBP7Q16576 425 aa11.68□□□□□ -0.54
MSH5-216ENST00000484309 DCAF10Q5QP82 559 aa11.68□□□□□ -0.54
MSH5-216ENST00000484309 CATSPEREQ5SY80 951 aa11.68□□□□□ -0.54
MSH5-216ENST00000484309 PRMT9Q6P2P2 845 aa11.68□□□□□ -0.54
MSH5-216ENST00000484309 FRA10AC1Q70Z53 315 aa11.68□□□□□ -0.54
MSH5-216ENST00000484309 PRSS41Q7RTY9 318 aa11.68□□□□□ -0.54
MSH5-216ENST00000484309 SHISA5Q8N114 240 aa11.68□□□□□ -0.54
MSH5-216ENST00000484309 TEX19Q8NA77 164 aa11.68□□□□□ -0.54
MSH5-216ENST00000484309 STT3BQ8TCJ2 826 aa11.68□□□□□ -0.54
MSH5-216ENST00000484309 MIEF2Q96C03 454 aa11.68□□□□□ -0.54
MSH5-216ENST00000484309 PDLIM5Q96HC4 596 aaKnown RBP11.68□□□□□ -0.54
MSH5-216ENST00000484309 GPR22Q99680 433 aa11.68□□□□□ -0.54
MSH5-216ENST00000484309 CPNE1Q99829 537 aa11.68□□□□□ -0.54
MSH5-216ENST00000484309 CRB3Q9BUF7 120 aa11.68□□□□□ -0.54
MSH5-216ENST00000484309 SLC26A1Q9H2B4 701 aa11.68□□□□□ -0.54
MSH5-216ENST00000484309 SPNS1Q9H2V7 528 aa11.68□□□□□ -0.54
MSH5-216ENST00000484309 WDR54Q9H977 334 aa11.68□□□□□ -0.54
MSH5-216ENST00000484309 ZDHHC18Q9NUE0 388 aa11.68□□□□□ -0.54
MSH5-216ENST00000484309 LUZP4Q9P127 313 aa11.68□□□□□ -0.54
MSH5-216ENST00000484309 TRPC4Q9UBN4 977 aa11.68□□□□□ -0.54
MSH5-216ENST00000484309 ZNF282Q9UDV7 671 aaPredicted RBP11.68□□□□□ -0.54
MSH5-216ENST00000484309 ANAPC2Q9UJX6 822 aa11.68□□□□□ -0.54
MSH5-216ENST00000484309 FBXL4Q9UKA2 621 aa11.68□□□□□ -0.54
MSH5-216ENST00000484309 CNTRLQ7Z7A1 2325 aa11.68□□□□□ -0.54
MSH5-216ENST00000484309 VSTM2BA6NLU5 285 aa11.67□□□□□ -0.54
MSH5-216ENST00000484309 AGPSO00116 658 aa11.67□□□□□ -0.54
MSH5-216ENST00000484309 SOCS6O14544 535 aa11.67□□□□□ -0.54
MSH5-216ENST00000484309 CEACAM4O75871 244 aa11.67□□□□□ -0.54
MSH5-216ENST00000484309 WISP3O95389 354 aaPredicted RBP11.67□□□□□ -0.54
MSH5-216ENST00000484309 ANXA5P08758 320 aa11.67□□□□□ -0.54
MSH5-216ENST00000484309 GSTA2P09210 222 aa11.67□□□□□ -0.54
MSH5-216ENST00000484309 ZGLP1P0C6A0 271 aa11.67□□□□□ -0.54
MSH5-216ENST00000484309 CCDC166P0CW27 439 aa11.67□□□□□ -0.54
MSH5-216ENST00000484309 IL1RNP18510 177 aa11.67□□□□□ -0.54
MSH5-216ENST00000484309 MMP11P24347 488 aa11.67□□□□□ -0.54
MSH5-216ENST00000484309 HRH2P25021 359 aa11.67□□□□□ -0.54
MSH5-216ENST00000484309 CASRP41180 1078 aa11.67□□□□□ -0.54
MSH5-216ENST00000484309 DSG2Q14126 1118 aa11.67□□□□□ -0.54
MSH5-216ENST00000484309 NADK2Q4G0N4 442 aa11.67□□□□□ -0.54
MSH5-216ENST00000484309 FBXO48Q5FWF7 155 aa11.67□□□□□ -0.54
MSH5-216ENST00000484309 FAAH2Q6GMR7 532 aa11.67□□□□□ -0.54
MSH5-216ENST00000484309 CMC1Q7Z7K0 106 aa11.67□□□□□ -0.54
MSH5-216ENST00000484309 ADAMTSL2Q86TH1 951 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms