RNA–Protein interactions for RNA: ENST00000484084.5

RTFDC1-208, Transcript of Protein RTF2 homolog, humanhuman

TSL 5

Gene RTFDC1, Length 657 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-208ENST00000484084 RIMKLBQ9ULI2 386 aa8.12□□□□□ -1.11
RTFDC1-208ENST00000484084 PPT2Q9UMR5 302 aa8.12□□□□□ -1.11
RTFDC1-208ENST00000484084 CDC14AQ9UNH5 594 aa8.12□□□□□ -1.11
RTFDC1-208ENST00000484084 RNF6Q9Y252 685 aa8.12□□□□□ -1.11
RTFDC1-208ENST00000484084 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.12□□□□□ -1.117e-8■□□□□ 9.4
RTFDC1-208ENST00000484084 GTF3C3Q9Y5Q9 886 aa8.12□□□□□ -1.11
RTFDC1-208ENST00000484084 FLNAP21333 2647 aaKnown RBP8.11□□□□□ -1.11
RTFDC1-208ENST00000484084 A0A1B0GTH9 108 aa8.11□□□□□ -1.11
RTFDC1-208ENST00000484084 TCRBV7S2A1N4TA0A589 114 aa8.11□□□□□ -1.11
RTFDC1-208ENST00000484084 SOWAHDA6NJG2 315 aa8.11□□□□□ -1.11
RTFDC1-208ENST00000484084 GABRR3A8MPY1 467 aa8.11□□□□□ -1.11
RTFDC1-208ENST00000484084 ARHGEF33A8MVX0 844 aa8.11□□□□□ -1.11
RTFDC1-208ENST00000484084 MYO1CO00159 1063 aa8.11□□□□□ -1.11
RTFDC1-208ENST00000484084 FANCGO15287 622 aa8.11□□□□□ -1.11
RTFDC1-208ENST00000484084 MFAP3LO75121 409 aa8.11□□□□□ -1.11
RTFDC1-208ENST00000484084 FAM155BO75949 473 aa8.11□□□□□ -1.11
RTFDC1-208ENST00000484084 SUN1O94901 812 aa8.11□□□□□ -1.11
RTFDC1-208ENST00000484084 HOXD4P09016 255 aaPredicted RBP8.11□□□□□ -1.11
RTFDC1-208ENST00000484084 ARNTP27540 789 aa8.11□□□□□ -1.11
RTFDC1-208ENST00000484084 DLX5P56178 289 aa8.11□□□□□ -1.11
RTFDC1-208ENST00000484084 RHAGQ02094 409 aa8.11□□□□□ -1.11
RTFDC1-208ENST00000484084 PRDX1Q06830 199 aaKnown RBP8.11□□□□□ -1.11
RTFDC1-208ENST00000484084 FOXD4Q12950 439 aaPredicted RBP8.11□□□□□ -1.11
RTFDC1-208ENST00000484084 MEP1AQ16819 746 aa8.11□□□□□ -1.11
RTFDC1-208ENST00000484084 CMPK2Q5EBM0 449 aa8.11□□□□□ -1.11
RTFDC1-208ENST00000484084 SLC25A25Q6KCM7 469 aa8.11□□□□□ -1.11
RTFDC1-208ENST00000484084 AFTPHQ6ULP2 937 aa8.11□□□□□ -1.11
RTFDC1-208ENST00000484084 PLD3Q8IV08 490 aa8.11□□□□□ -1.11
RTFDC1-208ENST00000484084 ARMC10Q8N2F6 343 aa8.11□□□□□ -1.11
RTFDC1-208ENST00000484084 GHDCQ8N2G8 530 aa8.11□□□□□ -1.11
RTFDC1-208ENST00000484084 KIF2BQ8N4N8 673 aa8.11□□□□□ -1.11
RTFDC1-208ENST00000484084 SLC35B2Q8TB61 432 aa8.11□□□□□ -1.11
RTFDC1-208ENST00000484084 FAM57AQ8TBR7 257 aa8.11□□□□□ -1.11
RTFDC1-208ENST00000484084 M1APQ8TC57 530 aa8.11□□□□□ -1.11
RTFDC1-208ENST00000484084 ELP5Q8TE02 316 aa8.11□□□□□ -1.11
RTFDC1-208ENST00000484084 PPP1R2P1Q96PQ5 205 aa8.11□□□□□ -1.11
RTFDC1-208ENST00000484084 OLFM1Q99784 485 aa8.11□□□□□ -1.11
RTFDC1-208ENST00000484084 UTP23Q9BRU9 249 aaKnown RBP8.11□□□□□ -1.11
RTFDC1-208ENST00000484084 YIPF2Q9BWQ6 316 aa8.11□□□□□ -1.11
RTFDC1-208ENST00000484084 RAB11FIP5Q9BXF6 653 aa8.11□□□□□ -1.11
RTFDC1-208ENST00000484084 DRC3Q9H069 523 aa8.11□□□□□ -1.11
RTFDC1-208ENST00000484084 LANCL2Q9NS86 450 aa8.11□□□□□ -1.11
RTFDC1-208ENST00000484084 CCM2LQ9NUG4 571 aaPredicted RBP8.11□□□□□ -1.11
RTFDC1-208ENST00000484084 SPATA7Q9P0W8 599 aa8.11□□□□□ -1.11
RTFDC1-208ENST00000484084 TEKT2Q9UIF3 430 aa8.11□□□□□ -1.11
RTFDC1-208ENST00000484084 DUSP10Q9Y6W6 482 aa8.11□□□□□ -1.11
RTFDC1-208ENST00000484084 NSD1Q96L73 2696 aaPredicted RBP8.11□□□□□ -1.11
RTFDC1-208ENST00000484084 FEZF1A0PJY2 475 aa8.1□□□□□ -1.11
RTFDC1-208ENST00000484084 SYCE3A1L190 88 aa8.1□□□□□ -1.11
RTFDC1-208ENST00000484084 E7ENX8 843 aa8.1□□□□□ -1.11
RTFDC1-208ENST00000484084 H0YIG0 161 aa8.1□□□□□ -1.11
RTFDC1-208ENST00000484084 PRMT5O14744 637 aaPredicted RBP8.1□□□□□ -1.11
RTFDC1-208ENST00000484084 HAT1O14929 419 aa8.1□□□□□ -1.11
RTFDC1-208ENST00000484084 PHF2O75151 1096 aa8.1□□□□□ -1.11
RTFDC1-208ENST00000484084 PSIP1O75475 530 aaKnown RBP8.1□□□□□ -1.11
RTFDC1-208ENST00000484084 CTAG2O75638 210 aa8.1□□□□□ -1.11
RTFDC1-208ENST00000484084 NSA2O95478 260 aaKnown RBP8.1□□□□□ -1.11
RTFDC1-208ENST00000484084 TSPAN12O95859 305 aa8.1□□□□□ -1.11
RTFDC1-208ENST00000484084 CYC1P08574 325 aa8.1□□□□□ -1.11
RTFDC1-208ENST00000484084 CD46P15529 392 aa8.1□□□□□ -1.11
RTFDC1-208ENST00000484084 ABOP16442 354 aa8.1□□□□□ -1.11
RTFDC1-208ENST00000484084 TPP2P29144 1249 aaPredicted RBP8.1□□□□□ -1.11
RTFDC1-208ENST00000484084 AP2B1P63010 937 aa8.1□□□□□ -1.11
RTFDC1-208ENST00000484084 TAP2Q03519 686 aa8.1□□□□□ -1.11
RTFDC1-208ENST00000484084 TBX2Q13207 712 aaPredicted RBP8.1□□□□□ -1.11
RTFDC1-208ENST00000484084 ICE2Q659A1 982 aa8.1□□□□□ -1.11
RTFDC1-208ENST00000484084 TMEM214Q6NUQ4 689 aaKnown RBP8.1□□□□□ -1.11
RTFDC1-208ENST00000484084 CAVIN1Q6NZI2 390 aaKnown RBP8.1□□□□□ -1.11
RTFDC1-208ENST00000484084 CEP128Q6ZU80 1094 aa8.1□□□□□ -1.11
RTFDC1-208ENST00000484084 PRUNE1Q86TP1 453 aa8.1□□□□□ -1.11
RTFDC1-208ENST00000484084 CCDC71Q8IV32 467 aaPredicted RBP8.1□□□□□ -1.11
RTFDC1-208ENST00000484084 LIX1LQ8IVB5 337 aa8.1□□□□□ -1.11
RTFDC1-208ENST00000484084 VSTM4Q8IW00 320 aa8.1□□□□□ -1.11
RTFDC1-208ENST00000484084 LGI4Q8N135 537 aa8.1□□□□□ -1.11
RTFDC1-208ENST00000484084 PPFIBP2Q8ND30 876 aa8.1□□□□□ -1.11
RTFDC1-208ENST00000484084 OR51Q1Q8NH59 317 aa8.1□□□□□ -1.11
RTFDC1-208ENST00000484084 C16orf52Q8NHV5 167 aa8.1□□□□□ -1.11
RTFDC1-208ENST00000484084 ZNF480Q8WV37 535 aa8.1□□□□□ -1.11
RTFDC1-208ENST00000484084 TSLPQ969D9 159 aa8.1□□□□□ -1.11
RTFDC1-208ENST00000484084 TM4SF19Q96DZ7 209 aa8.1□□□□□ -1.11
RTFDC1-208ENST00000484084 PKP4Q99569 1192 aa8.1□□□□□ -1.11
RTFDC1-208ENST00000484084 SMR3AQ99954 134 aa8.1□□□□□ -1.11
RTFDC1-208ENST00000484084 KCNK13Q9HB14 408 aa8.1□□□□□ -1.11
RTFDC1-208ENST00000484084 CHRAC1Q9NRG0 131 aa8.1□□□□□ -1.11
RTFDC1-208ENST00000484084 TREX1Q9NSU2 369 aa8.1□□□□□ -1.11
RTFDC1-208ENST00000484084 LRFN1Q9P244 771 aa8.1□□□□□ -1.11
RTFDC1-208ENST00000484084 KCNN3Q9UGI6 736 aa8.1□□□□□ -1.11
RTFDC1-208ENST00000484084 TAC3Q9UHF0 121 aa8.1□□□□□ -1.11
RTFDC1-208ENST00000484084 SH2B3Q9UQQ2 575 aa8.1□□□□□ -1.11
RTFDC1-208ENST00000484084 MED16Q9Y2X0 877 aa8.1□□□□□ -1.11
RTFDC1-208ENST00000484084 L3MBTL1Q9Y468 752 aa8.1□□□□□ -1.11
RTFDC1-208ENST00000484084 PHF3Q92576 2039 aaKnown RBP8.09□□□□□ -1.11
RTFDC1-208ENST00000484084 KCNE1BA0A087WTH5 132 aa8.09□□□□□ -1.11
RTFDC1-208ENST00000484084 MACROD2A1Z1Q3 448 aa8.09□□□□□ -1.11
RTFDC1-208ENST00000484084 SGK494L7N484 410 aa8.09□□□□□ -1.11
RTFDC1-208ENST00000484084 PRRG2O14669 202 aa8.09□□□□□ -1.11
RTFDC1-208ENST00000484084 PRPF4O43172 522 aaKnown RBP eCLIP8.09□□□□□ -1.11
RTFDC1-208ENST00000484084 PROM1O43490 865 aa8.09□□□□□ -1.11
RTFDC1-208ENST00000484084 KLK8O60259 260 aa8.09□□□□□ -1.11
RTFDC1-208ENST00000484084 NIPSNAP2O75323 286 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms