RNA–Protein interactions for RNA: ENST00000483847.1

SMARCC1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-205ENST00000483847 NME2P1O60361 137 aa10.24□□□□□ -0.77
SMARCC1-205ENST00000483847 STK10O94804 968 aaKnown RBP10.24□□□□□ -0.77
SMARCC1-205ENST00000483847 ZWINTO95229 277 aa10.24□□□□□ -0.77
SMARCC1-205ENST00000483847 GOT2P00505 430 aaKnown RBP10.24□□□□□ -0.77
SMARCC1-205ENST00000483847 NME2P22392 152 aa10.24□□□□□ -0.77
SMARCC1-205ENST00000483847 CMPK1P30085 196 aa10.24□□□□□ -0.77
SMARCC1-205ENST00000483847 CHRNB4P30926 498 aa10.24□□□□□ -0.77
SMARCC1-205ENST00000483847 PTGS2P35354 604 aa10.24□□□□□ -0.77
SMARCC1-205ENST00000483847 RFC3P40938 356 aa10.24□□□□□ -0.77
SMARCC1-205ENST00000483847 NR0B1P51843 470 aaKnown RBP10.24□□□□□ -0.77
SMARCC1-205ENST00000483847 FOLH1Q04609 750 aa10.24□□□□□ -0.77
SMARCC1-205ENST00000483847 LTBQ06643 244 aa10.24□□□□□ -0.77
SMARCC1-205ENST00000483847 GARNL3Q5VVW2 1013 aa10.24□□□□□ -0.77
SMARCC1-205ENST00000483847 CES4AQ5XG92 561 aa10.24□□□□□ -0.77
SMARCC1-205ENST00000483847 TTC23LQ6PF05 361 aa10.24□□□□□ -0.77
SMARCC1-205ENST00000483847 SUSD1Q6UWL2 747 aa10.24□□□□□ -0.77
SMARCC1-205ENST00000483847 PRSS41Q7RTY9 318 aa10.24□□□□□ -0.77
SMARCC1-205ENST00000483847 ANKRD37Q7Z713 158 aa10.24□□□□□ -0.77
SMARCC1-205ENST00000483847 LUZP1Q86V48 1076 aa10.24□□□□□ -0.77
SMARCC1-205ENST00000483847 PAQR7Q86WK9 346 aa10.24□□□□□ -0.77
SMARCC1-205ENST00000483847 EID3Q8N140 333 aa10.24□□□□□ -0.77
SMARCC1-205ENST00000483847 FAM98AQ8NCA5 519 aaKnown RBP10.24□□□□□ -0.77
SMARCC1-205ENST00000483847 OR9A4Q8NGU2 314 aa10.24□□□□□ -0.77
SMARCC1-205ENST00000483847 ASB5Q8WWX0 329 aa10.24□□□□□ -0.77
SMARCC1-205ENST00000483847 NINJ1Q92982 152 aa10.24□□□□□ -0.77
SMARCC1-205ENST00000483847 ZNF778Q96MU6 729 aa10.24□□□□□ -0.77
SMARCC1-205ENST00000483847 ALS2CR12Q96Q35 445 aa10.24□□□□□ -0.77
SMARCC1-205ENST00000483847 DNAJC7Q99615 494 aa10.24□□□□□ -0.77
SMARCC1-205ENST00000483847 OLFM1Q99784 485 aa10.24□□□□□ -0.77
SMARCC1-205ENST00000483847 FERMT1Q9BQL6 677 aa10.24□□□□□ -0.77
SMARCC1-205ENST00000483847 PLCD4Q9BRC7 762 aa10.24□□□□□ -0.77
SMARCC1-205ENST00000483847 ZNF358Q9NW07 568 aa10.24□□□□□ -0.77
SMARCC1-205ENST00000483847 DNAJB12Q9NXW2 375 aaKnown RBP10.24□□□□□ -0.77
SMARCC1-205ENST00000483847 LRFN1Q9P244 771 aa10.24□□□□□ -0.77
SMARCC1-205ENST00000483847 ST6GALNAC2Q9UJ37 374 aa10.24□□□□□ -0.77
SMARCC1-205ENST00000483847 TSR3Q9UJK0 312 aaKnown RBP10.24□□□□□ -0.77
SMARCC1-205ENST00000483847 SOWAHDA6NJG2 315 aa10.23□□□□□ -0.77
SMARCC1-205ENST00000483847 VPS26AO75436 327 aa10.23□□□□□ -0.77
SMARCC1-205ENST00000483847 SLC25A12O75746 678 aa10.23□□□□□ -0.77
SMARCC1-205ENST00000483847 SUN1O94901 812 aa10.23□□□□□ -0.77
SMARCC1-205ENST00000483847 ADAM8P78325 824 aa10.23□□□□□ -0.77
SMARCC1-205ENST00000483847 ZNF425Q6IV72 752 aa10.23□□□□□ -0.77
SMARCC1-205ENST00000483847 PLD3Q8IV08 490 aa10.23□□□□□ -0.77
SMARCC1-205ENST00000483847 M1APQ8TC57 530 aa10.23□□□□□ -0.77
SMARCC1-205ENST00000483847 SKA2Q8WVK7 121 aaPredicted RBP10.23□□□□□ -0.77
SMARCC1-205ENST00000483847 LRRC45Q96CN5 670 aa10.23□□□□□ -0.77
SMARCC1-205ENST00000483847 SEC16BQ96JE7 1060 aa10.23□□□□□ -0.77
SMARCC1-205ENST00000483847 PPP1R2P1Q96PQ5 205 aa10.23□□□□□ -0.77
SMARCC1-205ENST00000483847 MDFIQ99750 246 aa10.23□□□□□ -0.77
SMARCC1-205ENST00000483847 TSSK1BQ9BXA7 367 aa10.23□□□□□ -0.77
SMARCC1-205ENST00000483847 CDCP1Q9H5V8 836 aa10.23□□□□□ -0.77
SMARCC1-205ENST00000483847 LRRC40Q9H9A6 602 aa10.23□□□□□ -0.77
SMARCC1-205ENST00000483847 MRPS30Q9NP92 439 aaKnown RBP10.23□□□□□ -0.77
SMARCC1-205ENST00000483847 MMP25Q9NPA2 562 aa10.23□□□□□ -0.77
SMARCC1-205ENST00000483847 IFNKQ9P0W0 207 aa10.23□□□□□ -0.77
SMARCC1-205ENST00000483847 HCN3Q9P1Z3 774 aa10.23□□□□□ -0.77
SMARCC1-205ENST00000483847 MARCH4Q9P2E8 410 aaPredicted RBP10.23□□□□□ -0.77
SMARCC1-205ENST00000483847 C19orf25Q9UFG5 118 aaPredicted RBP10.23□□□□□ -0.77
SMARCC1-205ENST00000483847 FN1P02751 2386 aaKnown RBP10.23□□□□□ -0.77
SMARCC1-205ENST00000483847 F8W8V4 182 aa10.22□□□□□ -0.77
SMARCC1-205ENST00000483847 PJA2O43164 708 aa10.22□□□□□ -0.77
SMARCC1-205ENST00000483847 PROM1O43490 865 aa10.22□□□□□ -0.77
SMARCC1-205ENST00000483847 HS6ST1O60243 411 aa10.22□□□□□ -0.77
SMARCC1-205ENST00000483847 KLK8O60259 260 aa10.22□□□□□ -0.77
SMARCC1-205ENST00000483847 CDC40O60508 579 aaKnown RBP eCLIP10.22□□□□□ -0.77
SMARCC1-205ENST00000483847 PHF2O75151 1096 aa10.22□□□□□ -0.77
SMARCC1-205ENST00000483847 CTAG2O75638 210 aa10.22□□□□□ -0.77
SMARCC1-205ENST00000483847 FOSL1P15407 271 aa10.22□□□□□ -0.77
SMARCC1-205ENST00000483847 CTNNA2P26232 953 aa10.22□□□□□ -0.77
SMARCC1-205ENST00000483847 TPP2P29144 1249 aaPredicted RBP10.22□□□□□ -0.77
SMARCC1-205ENST00000483847 XCR1P46094 333 aa10.22□□□□□ -0.77
SMARCC1-205ENST00000483847 AVPR1BP47901 424 aa10.22□□□□□ -0.77
SMARCC1-205ENST00000483847 DLX5P56178 289 aa10.22□□□□□ -0.77
SMARCC1-205ENST00000483847 TSTA3Q13630 321 aaPredicted RBP10.22□□□□□ -0.77
SMARCC1-205ENST00000483847 FAM53BQ14153 422 aa10.22□□□□□ -0.77
SMARCC1-205ENST00000483847 TMED2Q15363 201 aa10.22□□□□□ -0.77
SMARCC1-205ENST00000483847 EXT1Q16394 746 aa10.22□□□□□ -0.77
SMARCC1-205ENST00000483847 PARP6Q2NL67 630 aa10.22□□□□□ -0.77
SMARCC1-205ENST00000483847 SFT2D3Q587I9 215 aa10.22□□□□□ -0.77
SMARCC1-205ENST00000483847 CMPK2Q5EBM0 449 aa10.22□□□□□ -0.77
SMARCC1-205ENST00000483847 EMC4Q5J8M3 183 aa10.22□□□□□ -0.77
SMARCC1-205ENST00000483847 EEF1AKMT2Q5JPI9 291 aaKnown RBP10.22□□□□□ -0.77
SMARCC1-205ENST00000483847 AADACL2Q6P093 401 aa10.22□□□□□ -0.77
SMARCC1-205ENST00000483847 PAPD4Q6PIY7 484 aaKnown RBP10.22□□□□□ -0.77
SMARCC1-205ENST00000483847 AFTPHQ6ULP2 937 aa10.22□□□□□ -0.77
SMARCC1-205ENST00000483847 KIF2BQ8N4N8 673 aa10.22□□□□□ -0.77
SMARCC1-205ENST00000483847 RAB42Q8N4Z0 105 aa10.22□□□□□ -0.77
SMARCC1-205ENST00000483847 SLC5A8Q8N695 610 aa10.22□□□□□ -0.77
SMARCC1-205ENST00000483847 HORMAD2Q8N7B1 307 aa10.22□□□□□ -0.77
SMARCC1-205ENST00000483847 FAM71DQ8N9W8 422 aa10.22□□□□□ -0.77
SMARCC1-205ENST00000483847 OR8K1Q8NGG5 319 aa10.22□□□□□ -0.77
SMARCC1-205ENST00000483847 OR52K1Q8NGK4 314 aa10.22□□□□□ -0.77
SMARCC1-205ENST00000483847 OR6P1Q8NGX9 317 aa10.22□□□□□ -0.77
SMARCC1-205ENST00000483847 OR4L1Q8NH43 312 aa10.22□□□□□ -0.77
SMARCC1-205ENST00000483847 OR51Q1Q8NH59 317 aa10.22□□□□□ -0.77
SMARCC1-205ENST00000483847 RND1Q92730 232 aa10.22□□□□□ -0.77
SMARCC1-205ENST00000483847 RERGQ96A58 199 aaPredicted RBP10.22□□□□□ -0.77
SMARCC1-205ENST00000483847 TTC1Q99614 292 aa10.22□□□□□ -0.77
SMARCC1-205ENST00000483847 MACROD1Q9BQ69 325 aa10.22□□□□□ -0.77
SMARCC1-205ENST00000483847 POLDIP3Q9BY77 421 aaKnown RBP10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms