RNA–Protein interactions for RNA: ENST00000482251.2

CPSF4-212, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-212ENST00000482251 EFCAB8A8MWE9 144 aa9.95□□□□□ -0.82
CPSF4-212ENST00000482251 TCP11X1B4DZS4 312 aa9.95□□□□□ -0.82
CPSF4-212ENST00000482251 EIF3FO00303 357 aaPredicted RBP9.95□□□□□ -0.82
CPSF4-212ENST00000482251 FOXS1O43638 330 aa9.95□□□□□ -0.82
CPSF4-212ENST00000482251 PIAS1O75925 651 aa9.95□□□□□ -0.82
CPSF4-212ENST00000482251 IPO13O94829 963 aaKnown RBP9.95□□□□□ -0.82
CPSF4-212ENST00000482251 SEC31AO94979 1220 aaKnown RBP9.95□□□□□ -0.82
CPSF4-212ENST00000482251 GUCA1CO95843 209 aa9.95□□□□□ -0.82
CPSF4-212ENST00000482251 TSPAN12O95859 305 aa9.95□□□□□ -0.82
CPSF4-212ENST00000482251 CELA2AP08217 269 aa9.95□□□□□ -0.82
CPSF4-212ENST00000482251 IL1RNP18510 177 aa9.95□□□□□ -0.82
CPSF4-212ENST00000482251 FDXRP22570 491 aa9.95□□□□□ -0.82
CPSF4-212ENST00000482251 BCL6P41182 706 aa9.95□□□□□ -0.82
CPSF4-212ENST00000482251 RPL21P46778 160 aaKnown RBP9.95□□□□□ -0.82
CPSF4-212ENST00000482251 ARL4CP56559 192 aa9.95□□□□□ -0.82
CPSF4-212ENST00000482251 ABATP80404 500 aa9.95□□□□□ -0.82
CPSF4-212ENST00000482251 Q0VFX4 171 aa9.95□□□□□ -0.82
CPSF4-212ENST00000482251 PDIA2Q13087 525 aaKnown RBP9.95□□□□□ -0.82
CPSF4-212ENST00000482251 SP140Q13342 867 aa9.95□□□□□ -0.82
CPSF4-212ENST00000482251 ZNF460Q14592 562 aa9.95□□□□□ -0.82
CPSF4-212ENST00000482251 MFSD4BQ5TF39 518 aa9.95□□□□□ -0.82
CPSF4-212ENST00000482251 LRRC8EQ6NSJ5 796 aa9.95□□□□□ -0.82
CPSF4-212ENST00000482251 AGTRAPQ6RW13 159 aa9.95□□□□□ -0.82
CPSF4-212ENST00000482251 LINC00696Q6ZRV3 163 aa9.95□□□□□ -0.82
CPSF4-212ENST00000482251 KIAA0408Q6ZU52 694 aa9.95□□□□□ -0.82
CPSF4-212ENST00000482251 SYDE1Q6ZW31 735 aaPredicted RBP9.95□□□□□ -0.82
CPSF4-212ENST00000482251 VN1R4Q7Z5H5 301 aa9.95□□□□□ -0.82
CPSF4-212ENST00000482251 CUZD1Q86UP6 607 aa9.95□□□□□ -0.82
CPSF4-212ENST00000482251 ZC3H7AQ8IWR0 971 aaKnown RBP9.95□□□□□ -0.82
CPSF4-212ENST00000482251 IQCKQ8N0W5 287 aa9.95□□□□□ -0.82
CPSF4-212ENST00000482251 C17orf53Q8N3J3 647 aaPredicted RBP9.95□□□□□ -0.82
CPSF4-212ENST00000482251 ZADH2Q8N4Q0 377 aa9.95□□□□□ -0.82
CPSF4-212ENST00000482251 ARHGEF39Q8N4T4 335 aa9.95□□□□□ -0.82
CPSF4-212ENST00000482251 CISD2Q8N5K1 135 aaKnown RBP9.95□□□□□ -0.82
CPSF4-212ENST00000482251 GALNT11Q8NCW6 608 aa9.95□□□□□ -0.82
CPSF4-212ENST00000482251 FBXO36Q8NEA4 188 aa9.95□□□□□ -0.82
CPSF4-212ENST00000482251 OR9A4Q8NGU2 314 aa9.95□□□□□ -0.82
CPSF4-212ENST00000482251 GABPB2Q8TAK5 448 aaPredicted RBP9.95□□□□□ -0.82
CPSF4-212ENST00000482251 TM9SF4Q92544 642 aa9.95□□□□□ -0.82
CPSF4-212ENST00000482251 SNRNP40Q96DI7 357 aaKnown RBP9.95□□□□□ -0.82
CPSF4-212ENST00000482251 NAT9Q9BTE0 207 aa9.95□□□□□ -0.82
CPSF4-212ENST00000482251 RBCK1Q9BYM8 510 aa9.95□□□□□ -0.82
CPSF4-212ENST00000482251 DPH5Q9H2P9 285 aa9.95□□□□□ -0.82
CPSF4-212ENST00000482251 PARVBQ9HBI1 364 aa9.95□□□□□ -0.82
CPSF4-212ENST00000482251 ASF1BQ9NVP2 202 aa9.95□□□□□ -0.82
CPSF4-212ENST00000482251 ARL15Q9NXU5 204 aa9.95□□□□□ -0.82
CPSF4-212ENST00000482251 HCN3Q9P1Z3 774 aa9.95□□□□□ -0.82
CPSF4-212ENST00000482251 C5AR2Q9P296 337 aa9.95□□□□□ -0.82
CPSF4-212ENST00000482251 IKZF3Q9UKT9 509 aa9.95□□□□□ -0.82
CPSF4-212ENST00000482251 SNX24Q9Y343 169 aa9.95□□□□□ -0.82
CPSF4-212ENST00000482251 TEX264Q9Y6I9 313 aa9.95□□□□□ -0.82
CPSF4-212ENST00000482251 FLNCQ14315 2725 aa9.94□□□□□ -0.82
CPSF4-212ENST00000482251 DOCK10Q96BY6 2186 aa9.94□□□□□ -0.82
CPSF4-212ENST00000482251 IGLV3-12A0A075B6K2 115 aa9.94□□□□□ -0.82
CPSF4-212ENST00000482251 NSG1A0A0A6YYJ2 146 aa9.94□□□□□ -0.82
CPSF4-212ENST00000482251 BLACEA4D250 179 aa9.94□□□□□ -0.82
CPSF4-212ENST00000482251 CLEC18AA5D8T8 446 aa9.94□□□□□ -0.82
CPSF4-212ENST00000482251 NPEPPSL1A6NEC2 478 aa9.94□□□□□ -0.82
CPSF4-212ENST00000482251 ZNF860A6NHJ4 632 aa9.94□□□□□ -0.82
CPSF4-212ENST00000482251 IDSB3KWA1 339 aa9.94□□□□□ -0.82
CPSF4-212ENST00000482251 TP73O15350 636 aa9.94□□□□□ -0.82
CPSF4-212ENST00000482251 PRPF4O43172 522 aaKnown RBP eCLIP9.94□□□□□ -0.82
CPSF4-212ENST00000482251 JRKO75564 520 aa9.94□□□□□ -0.82
CPSF4-212ENST00000482251 AGFG2O95081 481 aa9.94□□□□□ -0.82
CPSF4-212ENST00000482251 HPP00738 406 aa9.94□□□□□ -0.82
CPSF4-212ENST00000482251 HEXBP07686 556 aa9.94□□□□□ -0.82
CPSF4-212ENST00000482251 UQCRHP07919 91 aa9.94□□□□□ -0.82
CPSF4-212ENST00000482251 RNF224P0DH78 156 aa9.94□□□□□ -0.82
CPSF4-212ENST00000482251 COX6A1P12074 109 aa9.94□□□□□ -0.82
CPSF4-212ENST00000482251 PAFAH1B1P43034 410 aa9.94□□□□□ -0.82
CPSF4-212ENST00000482251 GLRBP48167 497 aa9.94□□□□□ -0.82
CPSF4-212ENST00000482251 EFNA3P52797 238 aa9.94□□□□□ -0.82
CPSF4-212ENST00000482251 EMP2P54851 167 aa9.94□□□□□ -0.82
CPSF4-212ENST00000482251 IL2P60568 153 aa9.94□□□□□ -0.82
CPSF4-212ENST00000482251 RPS15AP62244 130 aaKnown RBP9.94□□□□□ -0.82
CPSF4-212ENST00000482251 CSNK1G2P78368 415 aa9.94□□□□□ -0.82
CPSF4-212ENST00000482251 C2orf54Q08AI8 447 aa9.94□□□□□ -0.82
CPSF4-212ENST00000482251 NR6A1Q15406 480 aa9.94□□□□□ -0.82
CPSF4-212ENST00000482251 STEAP4Q687X5 459 aa9.94□□□□□ -0.82
CPSF4-212ENST00000482251 FAM45BPQ6NSW5 357 aa9.94□□□□□ -0.82
CPSF4-212ENST00000482251 CLEC18BQ6UXF7 455 aa9.94□□□□□ -0.82
CPSF4-212ENST00000482251 C17orf64Q86WR6 236 aa9.94□□□□□ -0.82
CPSF4-212ENST00000482251 HPS6Q86YV9 775 aa9.94□□□□□ -0.82
CPSF4-212ENST00000482251 SIRT6Q8N6T7 355 aa9.94□□□□□ -0.82
CPSF4-212ENST00000482251 CLEC18CQ8NCF0 446 aa9.94□□□□□ -0.82
CPSF4-212ENST00000482251 FAM45AQ8TCE6 357 aa9.94□□□□□ -0.82
CPSF4-212ENST00000482251 PDLIM2Q96JY6 352 aa9.94□□□□□ -0.82
CPSF4-212ENST00000482251 CCDC138Q96M89 665 aa9.94□□□□□ -0.82
CPSF4-212ENST00000482251 TSNARE1Q96NA8 513 aa9.94□□□□□ -0.82
CPSF4-212ENST00000482251 RUNDC3BQ96NL0 473 aa9.94□□□□□ -0.82
CPSF4-212ENST00000482251 WDR77Q9BQA1 342 aaPredicted RBP9.94□□□□□ -0.82
CPSF4-212ENST00000482251 UNKQ9C0B0 810 aaKnown RBP9.94□□□□□ -0.82
CPSF4-212ENST00000482251 LHPPQ9H008 270 aa9.94□□□□□ -0.82
CPSF4-212ENST00000482251 C14orf105Q9NVL8 296 aa9.94□□□□□ -0.82
CPSF4-212ENST00000482251 ZFATQ9P243 1243 aa9.94□□□□□ -0.82
CPSF4-212ENST00000482251 CDC14AQ9UNH5 594 aa9.94□□□□□ -0.82
CPSF4-212ENST00000482251 NOVA2Q9UNW9 492 aaKnown RBP9.94□□□□□ -0.82
CPSF4-212ENST00000482251 IGHV3-20A0A0C4DH32 117 aa9.93□□□□□ -0.82
CPSF4-212ENST00000482251 FAM95CA0A1B0GW59 222 aa9.93□□□□□ -0.82
CPSF4-212ENST00000482251 CCDC188H7C350 402 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms