RNA–Protein interactions for RNA: ENST00000481641.1

CLK1-211, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 690 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-211ENST00000481641 ASIC3Q9UHC3 531 aa17.63■□□□□ 0.41
CLK1-211ENST00000481641 TRMT6Q9UJA5 497 aaKnown RBP17.63■□□□□ 0.41
CLK1-211ENST00000481641 ERRFI1Q9UJM3 462 aaPredicted RBP17.63■□□□□ 0.41
CLK1-211ENST00000481641 SNX12Q9UMY4 172 aa17.63■□□□□ 0.41
CLK1-211ENST00000481641 SCN3AQ9NY46 2000 aa17.62■□□□□ 0.41
CLK1-211ENST00000481641 GOLGA6L10A0A0M3HER8 536 aa17.62■□□□□ 0.41
CLK1-211ENST00000481641 DNALI1O14645 258 aaPredicted RBP17.62■□□□□ 0.41
CLK1-211ENST00000481641 ANXA5P08758 320 aa17.62■□□□□ 0.41
CLK1-211ENST00000481641 CDKN2DP55273 166 aa17.62■□□□□ 0.41
CLK1-211ENST00000481641 HP1BP3Q5SSJ5 553 aaPredicted RBP17.62■□□□□ 0.41
CLK1-211ENST00000481641 GARNL3Q5VVW2 1013 aa17.62■□□□□ 0.41
CLK1-211ENST00000481641 ISLR2Q6UXK2 745 aa17.62■□□□□ 0.41
CLK1-211ENST00000481641 NDUFAF7Q7L592 441 aa17.62■□□□□ 0.41
CLK1-211ENST00000481641 ALKBH8Q96BT7 664 aaKnown RBP17.62■□□□□ 0.41
CLK1-211ENST00000481641 MVB12AQ96EY5 273 aa17.62■□□□□ 0.41
CLK1-211ENST00000481641 PWWP2AQ96N64 755 aa17.62■□□□□ 0.41
CLK1-211ENST00000481641 BARD1Q99728 777 aaKnown RBP17.62■□□□□ 0.41
CLK1-211ENST00000481641 DRC3Q9H069 523 aa17.62■□□□□ 0.41
CLK1-211ENST00000481641 ATG10Q9H0Y0 220 aa17.62■□□□□ 0.41
CLK1-211ENST00000481641 EPS8L2Q9H6S3 715 aa17.62■□□□□ 0.41
CLK1-211ENST00000481641 PDE10AQ9Y233 779 aa17.62■□□□□ 0.41
CLK1-211ENST00000481641 SVILO95425 2214 aa17.62■□□□□ 0.41
CLK1-211ENST00000481641 NSG1A0A0A6YYJ2 146 aa17.61■□□□□ 0.41
CLK1-211ENST00000481641 HEXBP07686 556 aa17.61■□□□□ 0.41
CLK1-211ENST00000481641 TBPL1P62380 186 aa17.61■□□□□ 0.41
CLK1-211ENST00000481641 PTK6Q13882 451 aa17.61■□□□□ 0.41
CLK1-211ENST00000481641 ZNF169Q14929 603 aaPredicted RBP17.61■□□□□ 0.41
CLK1-211ENST00000481641 BBS9Q3SYG4 887 aa17.61■□□□□ 0.41
CLK1-211ENST00000481641 PAQR3Q6TCH7 311 aa17.61■□□□□ 0.41
CLK1-211ENST00000481641 PRSS41Q7RTY9 318 aa17.61■□□□□ 0.41
CLK1-211ENST00000481641 VN1R4Q7Z5H5 301 aa17.61■□□□□ 0.41
CLK1-211ENST00000481641 ZC3H7AQ8IWR0 971 aaKnown RBP17.61■□□□□ 0.41
CLK1-211ENST00000481641 KBTBD2Q8IY47 623 aa17.61■□□□□ 0.41
CLK1-211ENST00000481641 SIRT6Q8N6T7 355 aa17.61■□□□□ 0.41
CLK1-211ENST00000481641 OR9A4Q8NGU2 314 aa17.61■□□□□ 0.41
CLK1-211ENST00000481641 BRIX1Q8TDN6 353 aaKnown RBP17.61■□□□□ 0.41
CLK1-211ENST00000481641 EBNA1BP2Q99848 306 aaKnown RBP17.61■□□□□ 0.41
CLK1-211ENST00000481641 KCNF1Q9H3M0 494 aa17.61■□□□□ 0.41
CLK1-211ENST00000481641 PLAC1Q9HBJ0 212 aa17.61■□□□□ 0.41
CLK1-211ENST00000481641 MKKSQ9NPJ1 570 aaPredicted RBP17.61■□□□□ 0.41
CLK1-211ENST00000481641 CCDC177Q9NQR7 707 aaPredicted RBP17.61■□□□□ 0.41
CLK1-211ENST00000481641 TMEM184CQ9NVA4 438 aa17.61■□□□□ 0.41
CLK1-211ENST00000481641 PLA2G3Q9NZ20 509 aa17.61■□□□□ 0.41
CLK1-211ENST00000481641 PTGFRNQ9P2B2 879 aa17.61■□□□□ 0.41
CLK1-211ENST00000481641 IGHV1-45A0A0A0MS14 117 aa17.6■□□□□ 0.41
CLK1-211ENST00000481641 FEZF1A0PJY2 475 aa17.6■□□□□ 0.41
CLK1-211ENST00000481641 PRPF4O43172 522 aaKnown RBP eCLIP17.6■□□□□ 0.41
CLK1-211ENST00000481641 JRKO75564 520 aa17.6■□□□□ 0.41
CLK1-211ENST00000481641 AHSGP02765 367 aa17.6■□□□□ 0.41
CLK1-211ENST00000481641 PRR35P0CG20 571 aa17.6■□□□□ 0.41
CLK1-211ENST00000481641 CXCR2P25025 360 aa17.6■□□□□ 0.41
CLK1-211ENST00000481641 RELAQ04206 551 aa17.6■□□□□ 0.41
CLK1-211ENST00000481641 CDC16Q13042 620 aa17.6■□□□□ 0.41
CLK1-211ENST00000481641 MFAP5Q13361 173 aa17.6■□□□□ 0.41
CLK1-211ENST00000481641 UGT3A1Q6NUS8 523 aa17.6■□□□□ 0.41
CLK1-211ENST00000481641 MCOLN3Q8TDD5 553 aa17.6■□□□□ 0.41
CLK1-211ENST00000481641 GRHL3Q8TE85 626 aa17.6■□□□□ 0.41
CLK1-211ENST00000481641 PSMF1Q92530 271 aa17.6■□□□□ 0.41
CLK1-211ENST00000481641 CCDC138Q96M89 665 aa17.6■□□□□ 0.41
CLK1-211ENST00000481641 C14orf105Q9NVL8 296 aa17.6■□□□□ 0.41
CLK1-211ENST00000481641 MKL2Q9ULH7 1088 aa17.6■□□□□ 0.41
CLK1-211ENST00000481641 POLEQ07864 2286 aa17.59■□□□□ 0.41
CLK1-211ENST00000481641 EIF3FO00303 357 aaPredicted RBP17.59■□□□□ 0.41
CLK1-211ENST00000481641 TXNDC9O14530 226 aa17.59■□□□□ 0.41
CLK1-211ENST00000481641 ZSCAN12O43309 604 aa17.59■□□□□ 0.41
CLK1-211ENST00000481641 LCMT2O60294 686 aaKnown RBP17.59■□□□□ 0.41
CLK1-211ENST00000481641 F10P00742 488 aa17.59■□□□□ 0.41
CLK1-211ENST00000481641 IVDP26440 423 aa17.59■□□□□ 0.41
CLK1-211ENST00000481641 TSFMP43897 325 aaKnown RBP17.59■□□□□ 0.41
CLK1-211ENST00000481641 RGS4P49798 205 aa17.59■□□□□ 0.41
CLK1-211ENST00000481641 CSNK1G2P78368 415 aa17.59■□□□□ 0.41
CLK1-211ENST00000481641 NAE1Q13564 534 aa17.59■□□□□ 0.41
CLK1-211ENST00000481641 FAM53BQ14153 422 aa17.59■□□□□ 0.41
CLK1-211ENST00000481641 ELOAQ14241 798 aaKnown RBP17.59■□□□□ 0.41
CLK1-211ENST00000481641 PCOLCEQ15113 449 aa17.59■□□□□ 0.41
CLK1-211ENST00000481641 NDUFA9Q16795 377 aa17.59■□□□□ 0.41
CLK1-211ENST00000481641 PHKG1Q16816 387 aa17.59■□□□□ 0.41
CLK1-211ENST00000481641 SPANXN3Q5MJ09 141 aa17.59■□□□□ 0.41
CLK1-211ENST00000481641 AGTRAPQ6RW13 159 aa17.59■□□□□ 0.41
CLK1-211ENST00000481641 LINGO1Q96FE5 620 aa17.59■□□□□ 0.41
CLK1-211ENST00000481641 CFAP36Q96G28 342 aa17.59■□□□□ 0.41
CLK1-211ENST00000481641 LMF1Q96S06 567 aa17.59■□□□□ 0.41
CLK1-211ENST00000481641 TGIF2Q9GZN2 237 aa17.59■□□□□ 0.41
CLK1-211ENST00000481641 PARVBQ9HBI1 364 aa17.59■□□□□ 0.41
CLK1-211ENST00000481641 AGPAT4Q9NRZ5 378 aa17.59■□□□□ 0.41
CLK1-211ENST00000481641 TAS2R13Q9NYV9 303 aa17.59■□□□□ 0.41
CLK1-211ENST00000481641 ZGRF1Q86YA3 2104 aa17.59■□□□□ 0.41
CLK1-211ENST00000481641 OR2W5A6NFC9 320 aa17.58■□□□□ 0.4
CLK1-211ENST00000481641 CES2O00748 559 aa17.58■□□□□ 0.4
CLK1-211ENST00000481641 BMP10O95393 424 aa17.58■□□□□ 0.4
CLK1-211ENST00000481641 DDAH2O95865 285 aa17.58■□□□□ 0.4
CLK1-211ENST00000481641 LDLRP01130 860 aa17.58■□□□□ 0.4
CLK1-211ENST00000481641 C8GP07360 202 aa17.58■□□□□ 0.4
CLK1-211ENST00000481641 CDH1P12830 882 aa17.58■□□□□ 0.4
CLK1-211ENST00000481641 IL1RNP18510 177 aa17.58■□□□□ 0.4
CLK1-211ENST00000481641 COL8A1P27658 744 aa17.58■□□□□ 0.4
CLK1-211ENST00000481641 SOX11P35716 441 aa17.58■□□□□ 0.4
CLK1-211ENST00000481641 BCL6P41182 706 aa17.58■□□□□ 0.4
CLK1-211ENST00000481641 AVPR1BP47901 424 aa17.58■□□□□ 0.4
CLK1-211ENST00000481641 RPS15AP62244 130 aaKnown RBP17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms