RNA–Protein interactions for RNA: ENST00000481109.5

PRPF4B-206, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 2,364 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-206ENST00000481109 TMEM107Q6UX40 140 aa10.07□□□□□ -0.8
PRPF4B-206ENST00000481109 RBMS3Q6XE24 437 aaKnown RBP10.07□□□□□ -0.8
PRPF4B-206ENST00000481109 FAM196AQ6ZSG2 479 aa10.07□□□□□ -0.8
PRPF4B-206ENST00000481109 DENND6AQ8IWF6 608 aa10.07□□□□□ -0.8
PRPF4B-206ENST00000481109 RIMKLAQ8IXN7 391 aa10.07□□□□□ -0.8
PRPF4B-206ENST00000481109 UXS1Q8NBZ7 420 aa10.07□□□□□ -0.8
PRPF4B-206ENST00000481109 OTULINQ96BN8 352 aa10.07□□□□□ -0.8
PRPF4B-206ENST00000481109 SLC38A2Q96QD8 506 aa10.07□□□□□ -0.8
PRPF4B-206ENST00000481109 MAP3K3Q99759 626 aa10.07□□□□□ -0.8
PRPF4B-206ENST00000481109 CEP41Q9BYV8 373 aa10.07□□□□□ -0.8
PRPF4B-206ENST00000481109 OPN3Q9H1Y3 402 aaPredicted RBP10.07□□□□□ -0.8
PRPF4B-206ENST00000481109 MYOZ1Q9NP98 299 aaPredicted RBP10.07□□□□□ -0.8
PRPF4B-206ENST00000481109 C11orf16Q9NQ32 467 aa10.07□□□□□ -0.8
PRPF4B-206ENST00000481109 BARHL2Q9NY43 387 aa10.07□□□□□ -0.8
PRPF4B-206ENST00000481109 C3orf18Q9UK00 162 aa10.07□□□□□ -0.8
PRPF4B-206ENST00000481109 KLK4Q9Y5K2 254 aa10.07□□□□□ -0.8
PRPF4B-206ENST00000481109 hCG_1818297A0A087WSY0 165 aa10.06□□□□□ -0.8
PRPF4B-206ENST00000481109 SMIM22K7EJ46 135 aa10.06□□□□□ -0.8
PRPF4B-206ENST00000481109 M0R233 179 aa10.06□□□□□ -0.8
PRPF4B-206ENST00000481109 ARNTLO00327 626 aa10.06□□□□□ -0.8
PRPF4B-206ENST00000481109 PLA2G10O15496 165 aa10.06□□□□□ -0.8
PRPF4B-206ENST00000481109 XPNPEP2O43895 674 aa10.06□□□□□ -0.8
PRPF4B-206ENST00000481109 TULP3O75386 442 aa10.06□□□□□ -0.8
PRPF4B-206ENST00000481109 STARD3NLO95772 234 aa10.06□□□□□ -0.8
PRPF4B-206ENST00000481109 FADS2O95864 444 aaKnown RBP10.06□□□□□ -0.8
PRPF4B-206ENST00000481109 GLUD1P00367 558 aa10.06□□□□□ -0.8
PRPF4B-206ENST00000481109 ALDOAP04075 364 aaKnown RBP10.06□□□□□ -0.8
PRPF4B-206ENST00000481109 FGRP09769 529 aa10.06□□□□□ -0.8
PRPF4B-206ENST00000481109 ANXA3P12429 323 aa10.06□□□□□ -0.8
PRPF4B-206ENST00000481109 FOLR2P14207 255 aa10.06□□□□□ -0.8
PRPF4B-206ENST00000481109 CD58P19256 250 aa10.06□□□□□ -0.8
PRPF4B-206ENST00000481109 TFEBP19484 476 aa10.06□□□□□ -0.8
PRPF4B-206ENST00000481109 EFNA1P20827 205 aaPredicted RBP10.06□□□□□ -0.8
PRPF4B-206ENST00000481109 PTGFRP43088 359 aa10.06□□□□□ -0.8
PRPF4B-206ENST00000481109 RBP2P50120 134 aa10.06□□□□□ -0.8
PRPF4B-206ENST00000481109 ZNF81P51508 661 aa10.06□□□□□ -0.8
PRPF4B-206ENST00000481109 HOXC5Q00444 222 aa10.06□□□□□ -0.8
PRPF4B-206ENST00000481109 FOXM1Q08050 763 aa10.06□□□□□ -0.8
PRPF4B-206ENST00000481109 PTCHD3Q3KNS1 767 aa10.06□□□□□ -0.8
PRPF4B-206ENST00000481109 MINDY4Q4G0A6 757 aa10.06□□□□□ -0.8
PRPF4B-206ENST00000481109 NLGN1Q8N2Q7 840 aa10.06□□□□□ -0.8
PRPF4B-206ENST00000481109 SPPL3Q8TCT6 385 aa10.06□□□□□ -0.8
PRPF4B-206ENST00000481109 RNF139Q8WU17 664 aa10.06□□□□□ -0.8
PRPF4B-206ENST00000481109 CHURC1Q8WUH1 139 aa10.06□□□□□ -0.8
PRPF4B-206ENST00000481109 COQ10AQ96MF6 247 aa10.06□□□□□ -0.8
PRPF4B-206ENST00000481109 Q96MT0 163 aa10.06□□□□□ -0.8
PRPF4B-206ENST00000481109 PKP4Q99569 1192 aa10.06□□□□□ -0.8
PRPF4B-206ENST00000481109 RBM4BQ9BQ04 359 aaKnown RBP10.06□□□□□ -0.8
PRPF4B-206ENST00000481109 CMSS1Q9BQ75 279 aaKnown RBP10.06□□□□□ -0.8
PRPF4B-206ENST00000481109 RBM4Q9BWF3 364 aaKnown RBP10.06□□□□□ -0.8
PRPF4B-206ENST00000481109 CD244Q9BZW8 370 aa10.06□□□□□ -0.8
PRPF4B-206ENST00000481109 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.06□□□□□ -0.8
PRPF4B-206ENST00000481109 UBE2TQ9NPD8 197 aaPredicted RBP10.06□□□□□ -0.8
PRPF4B-206ENST00000481109 HCN3Q9P1Z3 774 aa10.06□□□□□ -0.8
PRPF4B-206ENST00000481109 SPASTQ9UBP0 616 aa10.06□□□□□ -0.8
PRPF4B-206ENST00000481109 GHRLQ9UBU3 117 aa10.06□□□□□ -0.8
PRPF4B-206ENST00000481109 SEC14L3Q9UDX4 400 aa10.06□□□□□ -0.8
PRPF4B-206ENST00000481109 SCP2D1Q9UJQ7 156 aa10.06□□□□□ -0.8
PRPF4B-206ENST00000481109 ERVW-1Q9UQF0 538 aa10.06□□□□□ -0.8
PRPF4B-206ENST00000481109 SCN7AQ01118 1682 aa10.06□□□□□ -0.8
PRPF4B-206ENST00000481109 TAF1LQ8IZX4 1826 aa10.06□□□□□ -0.8
PRPF4B-206ENST00000481109 A0A1B0GVI7 797 aa10.06□□□□□ -0.8
PRPF4B-206ENST00000481109 L7N2F9 121 aa10.06□□□□□ -0.8
PRPF4B-206ENST00000481109 ZNF197O14709 1029 aa10.06□□□□□ -0.8
PRPF4B-206ENST00000481109 CIDEAO60543 219 aa10.06□□□□□ -0.8
PRPF4B-206ENST00000481109 UBXN7O94888 489 aa10.06□□□□□ -0.8
PRPF4B-206ENST00000481109 CSF3P09919 207 aa10.06□□□□□ -0.8
PRPF4B-206ENST00000481109 NUDT7P0C024 238 aa10.06□□□□□ -0.8
PRPF4B-206ENST00000481109 ARP10275 920 aa10.06□□□□□ -0.8
PRPF4B-206ENST00000481109 PIGAP37287 484 aa10.06□□□□□ -0.8
PRPF4B-206ENST00000481109 YWHAZP63104 245 aaKnown RBP10.06□□□□□ -0.8
PRPF4B-206ENST00000481109 POU4F1Q01851 419 aa10.06□□□□□ -0.8
PRPF4B-206ENST00000481109 GLO1Q04760 184 aa10.06□□□□□ -0.8
PRPF4B-206ENST00000481109 TAF1AQ15573 450 aaPredicted RBP10.06□□□□□ -0.8
PRPF4B-206ENST00000481109 LCN1P1Q5VSP4 162 aa10.06□□□□□ -0.8
PRPF4B-206ENST00000481109 LIPNQ5VXI9 398 aa10.06□□□□□ -0.8
PRPF4B-206ENST00000481109 LIPJQ5W064 366 aa10.06□□□□□ -0.8
PRPF4B-206ENST00000481109 RAET1GQ6H3X3 334 aa10.06□□□□□ -0.8
PRPF4B-206ENST00000481109 LRRC8DQ7L1W4 858 aa10.06□□□□□ -0.8
PRPF4B-206ENST00000481109 EIF3MQ7L2H7 374 aaKnown RBP10.06□□□□□ -0.8
PRPF4B-206ENST00000481109 SLC26A9Q7LBE3 791 aa10.06□□□□□ -0.8
PRPF4B-206ENST00000481109 TRMT11Q7Z4G4 463 aaKnown RBP10.06□□□□□ -0.8
PRPF4B-206ENST00000481109 B3GNT8Q7Z7M8 397 aa10.06□□□□□ -0.8
PRPF4B-206ENST00000481109 CREB3L1Q96BA8 519 aa10.06□□□□□ -0.8
PRPF4B-206ENST00000481109 PYCR2Q96C36 320 aa10.06□□□□□ -0.8
PRPF4B-206ENST00000481109 MRPS24Q96EL2 167 aaKnown RBP10.06□□□□□ -0.8
PRPF4B-206ENST00000481109 SLC2A13Q96QE2 648 aa10.06□□□□□ -0.8
PRPF4B-206ENST00000481109 MRPL37Q9BZE1 423 aaKnown RBP10.06□□□□□ -0.8
PRPF4B-206ENST00000481109 IL22Q9GZX6 179 aa10.06□□□□□ -0.8
PRPF4B-206ENST00000481109 CDHR5Q9HBB8 845 aa10.06□□□□□ -0.8
PRPF4B-206ENST00000481109 PLAC1Q9HBJ0 212 aa10.06□□□□□ -0.8
PRPF4B-206ENST00000481109 MRPL47Q9HD33 250 aaKnown RBP10.06□□□□□ -0.8
PRPF4B-206ENST00000481109 SLAMF7Q9NQ25 335 aa10.06□□□□□ -0.8
PRPF4B-206ENST00000481109 SEMA3GQ9NS98 782 aa10.06□□□□□ -0.8
PRPF4B-206ENST00000481109 SMPD4Q9NXE4 827 aa10.06□□□□□ -0.8
PRPF4B-206ENST00000481109 SH3BGRL2Q9UJC5 107 aa10.06□□□□□ -0.8
PRPF4B-206ENST00000481109 DLGAP4Q9Y2H0 992 aa10.06□□□□□ -0.8
PRPF4B-206ENST00000481109 QSOX1O00391 747 aa10.05□□□□□ -0.8
PRPF4B-206ENST00000481109 NOBOXO60393 691 aa10.05□□□□□ -0.8
PRPF4B-206ENST00000481109 S1PR4O95977 384 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms